morexGenes - Barley RNA-seq Database

Contig contig_1609637

Source Contig contig_1609637

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1609637 (2235 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1609637

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22644	1	564 bp	MLOC_22644.1	Available	Available	None

CDS Structure of MLOC_22644

Contig Sequence (2235 bp)

>contig_1609637 2235 assembly3_WGSMorex_rbca.fasta
GGGGCGGGGGGCGGGGTAGGGCGACGGGGAGGAGGGGAAGCGCGGGGCGGTGAAGGAGCG
CGCGGCGGGGGAGGAGTAGAGGAAGCTGGGGAGGAGCGAGTCGCGGGAGAGGTCGGAGAG
CGCCATCGCCGCCGGGCCGAGAGATCCGGGCGCGGATTCGCGGGGGCGGTGCTTTCTGAG
CTCTCTCTCCTCTCTCTCGCGTTCGCGTGGGTTTGACGGGGAGTGGCGGCGGTGGCTGGA
ATATATGGAGGCGCTGCGCGTTCGCTCCCGACTTGTGTTAATAATTTAGGGTATACGCTG
TGGCTGGCGGCCGGGCACTGGTGGTGGGCTGGCCTGGCGTGGGGCCCGGCGGCAGTGTCC
GTTCGGCTTGTGGTTGGTGCCTGGCGTCTGGGGCGTGGATCGTACGCGTTCCCCGATCGA
ACTTTGCACATTTTTTGACAAACCAAAAAAAATAGTTTGTGTATTTTGGGACGGTCTGGC
CAAAGTCATCGCTAGCTGCTTGCCCTAAGCTAAGGAAAAGAGCCGTGGCTACTTTTCGGG
GGTCGTAAATGTGGAGCTACGCTTTGCTAATCGCGGCGCGGGTCGCCGTCGCGGAATATG
CAGGTGAATATTCCAATCCAAGGGAAGGGAGAGGGGCGCGGCCTTGCTCCGCCCGCCCGG
TCGACGGACGGGACGAGCCGCCGGAGTGGATGGGCCCTCGCGTGGGCCAGGTCCGGCGCC
CACCGGCGCGTTCCTTCTCTTCTCCCGTGTCGGTGCACCATGTTTTCGCAGCCTCGTCGG
CACATGCAGAGGTGGATGGGAGTGTTATTTCCATGGAAAGCACGAGTCAAATGAAATCAA
CTCTGTTGGGAGAGTTTGTTGCGGGCTGCCTGGCCCCGGGACGAGATGGAACCACCTCAA
GCCGCGGCGAAGGGCTGCTTGACTAAACGCAGAGGCGAAGGATGGTTTTTTGGCCGTCTC
AAGAACTAGTTTGTTGGGAAACATTGACCCGTGCACGCCGCCGACAAAATACGATCGTCT
TGTATGGTCACGATCTATGCGACAGCAGGGCAGGCGGCTCTCCTGGTGCGCTGAGCGGCG
GCTTCGTCTTTAGTTGTAGGGTGCCGGTTACGGGTTGTTCAGATGACAGAGCCGGTGGCT
TGTTGGATGTGCAGTCTTGAGGATCGGTGTGTTGATGATGCTCTTTTGGGGGTGGGGGAG
TATCGGTTTTTTGTCCAGGTTTTCGTTAATTAGCTGGACAACCCTCTTCTACATTTTTAA
TGGATCTAATCCTAAGAGACGTGTTTAAAAAAAATGATCGTCTTTTGAGAAAATAGAAAG
GACGTGTGCACGGGCGACTCGGGGAACAATAGAATAGGAGGTTGTTTAGCATCTCATGGT
TTCCCTTATCTTTTCGTTGACTTTTTATGTTGTTCATAGATGAGGTCTTTTTCTTTTGAG
TGTGGTTCATAGATGAATTTCATGTAGGCGTAGTCTAGTTAGTTAATGAATAGGGAAAGC
ATGCTCGTTAATTTATTACTCAATATATGGAATATCTTTGCATGACAATCCCCTAACATG
TGTGTTGTCCTTGCAAGAATCGGAGAGCACTCACTTGACATTAGAAAAAGAGTCGCCCAA
TCAAGCAATTAGTTGAACTACATCAGTCGTCCAATCAAGCAATTAGTCTAACCACATCAC
ATAAGTTGCCCAATCAAGCAATTAGTCGAACCACATCACAGGGCTATGGAGGAGGAAATA
GCAAAGCTTCTGACGAACAACTTCAAGCAAGATTTTCGATGTTCAGATTGCTTGATCAAC
CTCGTCGTGGTGTTAAAGAAGAACAAGATTTGCTACATGTACGTTGACTACACTAACACC
AAGAAGACGTGCCCTTAGGACCTGTTGGACCTGTTCCTGCTCCCCAGCATGGACCAAGTG
ATTGATTTCACTTTGGGGGTGTGAACATTTATCGTTTATGATGCCTGCTCGGGCTATTAT
CAGATACAGGTGAAGCATTCAGTTGGGAGATGACTATCTTTGTCACGCCACGTACACTGT
TTTACTAGAGTTATTTACGCAAAACCACCACACTTGGGGGCTAGGGTAACATATCAGTAC
CACATTTGAGCCAGGTGATAACCCACAAGTGTAGAGGATCGCAACAGTTTTTGAGGNNNN
NNNNNNNNNNNNAAATTTGTTGGTTCGCCAAAGGGAAGCGAAAGAATATTCTCAAGTATT
AGCAGCTGAGATTGT