Contig Data
morexGenes
Links



Map Locations of contig_160938 (5301 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_160938

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22626 4 2605 bp MLOC_22626.1 Available Available LOC_Os12g08260.4, FRAME:+3, EVALUE:0.0, 13112.m00872 protein dehydrogenase E1 component domain containing protein, expressed





CDS Structure of MLOC_22626






Contig Sequence (5301 bp)

>contig_160938 5301 assembly3_WGSMorex_rbca.fasta
TTTTTCCTTTTGCATTGCAGATAAATGATGAAGCGCGGGTTGAATAACAAAAACTACANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCGACGGAAGCAATAGTCGCTTTATTAG
TAGGTATAGATATTATTGCTACTTTATGTTTGAGGGCATACATTAGTGCTATTTATTCCT
GTTGAGCTGAGCATGCCCCCGCTGTCACGACAGCAGTTAAACTGAATCTTAGTTTAACTG
CATCAGATTTTATGGTGTCGTTTTCCGGAGTTTTCCAGATCTCAATCCATCGTCTGCATT
CCGGTGCCGTCCATGAAGGACCAATTTTTTTGTTTTGATCCTTTGTGGTAACAAATTTCG
AAATCAACCTCACTTTAAAAAAATCGAACTTGACCTTTTCTAATGACATCAACTTCTCTG
GTTCTTGTTTGCATGGGAGACGTCAAGATCTCTGACATCTGGTACGGACCTGCATGAGTG
GCTGACACGTTGAGTCTCTGACGTGGCAAAGGATTAGACATTAGTTCTGGATCAGACGCT
AGTCGTGGATCAGACGCCAAGGACCTTGGCATTTGATACCAAACGCGGACCTTGACGTCT
GATCCCAACAGATCACACAAACATTTTTTTAATAATATGTGTCACGTCATCCAGACGTCA
AGGTCTTTGATGTTTGGTACCAGACGTCGGGGTCCTTGACGTCTCGCCTTTTACCATATC
AAAGGCTCAACGGGTCAGCCAATCATGGAGGTCCGTATAAGATGACATTGACTTTGACGT
TTAGTCTTCCATACAAACCAGATATTATAGATGTCGGCGTCACCAAAAATGATCAAATTC
AATTTTTTTAATAAAGATCAATTTCGAAATTTGTTAGGTTAAAAGGTCAAAACAAAAAAT
TGTGAGCACAATGAGCTGAGCATGTCCTGTCACCAGCCTCAGCTCCCCATCCTTCAGCAC
CCACCCACCCCCAGCACCGGGCCACGGCATCCACGTGCAGCCTCCTGCCACACACGCCAG
CCTTCAATCCCTGCTGCTGCTGCAGTCAGTCGTCATCTCATCCGGACACCACCAGTGAGC
CGTGCCCGTCTTCTCCTACCCCCAAACTCCTCGCGCTCCTCGCTGCACACACACTTATCT
TTCCAACTCACGCTTTCTCCATCGTTGCTTCGCTTGCTTCTTCTCTTCTTTCCTTTTCTC
GTCTCTATCCAACTCCAACTCTGCCACCTATAAATTCCAGCCACCGCCATTGAATTGAAT
TGATTGCGCAGAATTCTTGCAGCTGATCGCGCCGGAAGCTCGCATCGTACGAGATAGTGT
GTGTACCTAGATAGTCACGTACATATACATGGCCGCGTGGTTGGTACGCCGGGCTGCCAG
GAGGGTCGCTGGCGAGCTGCGCGGTCGTGGACCAGGGCCGTGGTCCTTGAGCTCGTCGAC
AGTCCCGGTTCTCGGGGTGCCAGCAGTGGACCAAAGCAGGGCGTTCTGCTCCGTCCGGCG
CTTCGCAGGAGATAGCGCCGCCGCCGCTGCCGTCGAGGAACCGGAGAATGGACTTGCCGC
AGGCGGTCTGCAGGTATCTATGGACTCCTAGTATACAGTAGGACGGCCGCTTCTACACAT
GTGTGTTCTACAGAATTGTCAGGATAAAGTATAGTAATAGTACGAACGTAGTACCACGAA
TACTTAGGGTGCTCTGGTTTCGAAAATTACATACTTACTCCCTCCATCCCTAAATATAAG
TCTTATATTCAACTAATAGACTACATACGGATNTATATAGACATAATTTAGAGTATAGAC
TCATTTATTTTGCTCCGTATGTAGACACTTAGTGAAATATCTTAANNNNNNNNTATTTAG
GTACGGAGGGAGTACATTATAGGTAAACGCTTTCATCCGGCATGCCGGCCGAATCGTTTG
GTCGGTCGCACATGGGCCGCGCGCCTCGCTGGCAGATGCTTGCAGCATCTTTTCGTCAAA
TTTATTGCAACCGTGTATTTTTTTGATACAAACATTTTTCATTTAACTTTTTTTCTCGTG
TAAATTTGTTACGTTTATTTAGTAAAAGGTTGCATATACGTTTGGTTGCAACTCCAGTTC
GTCGAATTTTTCGTTACAATCGATGTTTTTATTTTTTCTACAACCGTGTTAATTTTTGCT
ACAACCGGCATCATTTTTTGCTTCAATCGTTCACTAGAATAGTTGCATACACGTTCACGT
AGATATTTGTTACAACCGGTGTTTGACTTTTGCTACCACGCATCATCAGATTCATTTTTT
TTCTACGATCACGTAGATATTTTTTTGCTACAAATTTTGTTTTTGTTGCAACCGTTGAAA
AAATTATTGCATCACGACGAATTTTGCTGCATCGAAAGAAAAAATGTTGCATGAAGATCC
AACGGTGCGGACGCACGGGATTGGTGGATCGGGCGACCCACGCGCGTCTTGAAAGTTTCG
GCCGGCGCGCCGGCACTGATCACTCCCCTACATTATATATATGCAGCATTATATATATGC
AGCAGGGAAGGTAAACCTACCGTCCTTCCTCAGAAAACAAACATTCAGGATGCGGCGCCT
AGGATCATGTGATCTTTCTCCTTCATTAAAGAAAAATTAGCGTGGATATCATCCTGATTC
TCAGTTGGAAAGAGCATCCTGTATACACGTGACAATATATGCTTCTAATATTCCTAAAAA
AAAGACATGTCATATCCTCAATTTTAACACAGGACAATAGTGGATAGAATTGACAACAAG
TAGTAAAGTAAGCAGATAAGGAAGGACGTGCCATTGAGTCAATAGGCTGGTGGGACTTCA
CTTCAGGTTTAGTAAGCTCACACGGCTTCTTCTTTTTTGCGTGATTTATTTTATATATTC
CTGTGATGTCAGTCGGTGTCGACTTGATGAGACAAATTATTACGAGTCTCTGCTGGTAAA
GTAGAATAATAATAATGCTGATATTGCCATGGTCAATCGTTGTCAACGGGTAAAATAGCC
ATTACCTTGCCTCCAAGGTCAATTAGACTAACCCGGCCGGTTGTGTTTCCAAATTTATTT
CCAAGAGATTTTATTCATTCTTTTTGGGCCACCAATGGGTTTTCCGGTGCACAGGTAACT
TAATTTTGATTGTTAACGACGCAGTGTGTAGATTTCCCTGGAGGAAAGCTTTCCTTTGTT
GGTGAAATGAATTTCCTGCCAGAGTCGCAAACGGAAAGGATCAACTGTTACCGTGTTCTT
GACGACGATGGTGGCACTATATACAACAGTAGATTCCAAGAGGTGTAGTACCGCCATTGC
CATTGCTCCAGGAGTGAATAATTTTCTTCTCAAGCATGTCTCTCATTCTTGTCAGGTCAG
CAAGGACTTGGCTCTGAAAATGTACAGTAACATGGTCACCCTCCAGATTATGGACACAAT
ATTCTACGAAGCTCAGAGGCAGGGAAGAATTTCCTTCTATCTAACTTCCAACGGTGAAGA
AGCAATCAACATAGCCTCTGCTGCTGCGCTTAGTGCTCAAGACATCGTACTACCTCAGGT
GCATATCACTTGCTCCAAAGAAGAATGTTAGTACTGAATAATATTGATTTTACTTACTCT
TTCTTTTCTTGGCCGGAAATTTTGGAGCCAAATAAAGTACAGGGAGCCTGGTGTTCTTCT
ATGGCGTGGCTTCACACTGCAAGAATTTGCAAACCAGTTGTTTGGGAATAAGCTGGATTA
TGGTAAAGGGAGGCAGATGCCAATACATTACGGATCAAACCGTCTGAATTATTTCACAGT
CTCATCGCCTATTGCGTAAGTATGAAATACTTCCTCCTTCCTTTTCGGAAAAGAAAAAAG
ATGAAATACTTCCTCCTTCCTTTTTGAAAAAAAAAGAAAGAAAAAGAGAGTCAAGCAGAG
ATTTATCCTTGTTGGCAATTGATCAGCACTCAGCTCCCTCAAGCTGTTGGGGCTGCCTAT
TCTCTCAAGATGGACAAGAAGAAGGCATGTGCCATCACATATTTCGGCGATGGTGGCACG
AGCGAGGTAGATGAACAATCATTGATTGCTTACATAAAACTTGTGACCAGATGTCTCTGA
CAGCTGAAAAACGCTAGGGAGACTTCCATGCCGCGCTCAACTTCGCTGCTGTGGCGGAAG
CACCGATGATCTTCTTCTGCCGCAACAATGGGTGGGCAATCAGCACCCCAACCGCCGAAC
AGTTCAGAAGTATGAAGTGCCCTCTGCTCAATCATGACTTTGTTACATACAAACATACAT
ACTCCCTCCGTCCAGAAATACTTGTCCTGGAAGTAGATGTATCTAGACTTATTTTAGTTA
TAGATACATCCATTTTGTATATTTTTAGGACAAGTATTTCCGGACGGAGGGAGTACAAAA
TATTGGCGCGTCACTGTGTAAAACCCAAGCACTCTTGCAGGTGACGGAGTTGTTACCCGG
GGTCAGGCCTACGGAATACGCAGTATCAGGCTAGACGGCAACGATACTCTTGCTGTGTAC
AGTGCAGTGCACACCGCCCGGGAAATGGCTATAACTGAAGGAAGGCCTATTTTAATCGAG
GTGCACATTAGTATAGTTTAACAAAATTTCAGAATATACCAATTGCTGAGAGTACTTGAC
CGAGTAGGGAGCTTTCAGGCGATGACCTACCGAGTCGGCCATCACTCGACATCCGACGAT
TCAACCAAGTACAGGCCGGCTGATGAGATGGAGCATTGGCGAACAGCAAGGGATCCCGTC
TCCAGGTACAGAAAATGGGTTCAGGGGAATGGATGGTGGTGCGATACTCAAGAGTCTCAA
CTCAGGAACAATGTGAGGCAAGAGGTAATGTAACATTGATGTTAACATTGCAGAAAGGTG
TATGATCTGGATCTCTGTAATGCATTTATTTATTTTCATATAGATGACCATCTCAAACTG
TTCGCTCATTTCTGTGCAGCTCCTGCAAGCCATTCAGGTGGCCGAGAGGATGCCAAAACA
CGGGCTTGCGGAGCTCTTCACAGATGTTTATGATCAAATCCCTTCCAACCTTCGCCAGCA
AGAGCGGTCGCTGCTGGATACCATCAAAAGGCACCCTGCAGAGTATCCGGCTGATGTGCC
TGTTTAGTAGCCTTAGCTCTGCGATGTTGTTGGAGTCTGTAAGTACCCATGAATAATGTA
TTTAGCTAGTACCATGAGAGTTAATATTGATTATAGCTTGAATTGTATGTAACTTGAAAA
GGAGGAATAAACTGCTCATCCAAAAAATCTTTGAAAGAAATAATACAAGAGATTAGCTGT
TGCTTACACAAAGAATAGTTG