Contig Data
morexGenes
Links



Map Locations of contig_160887 (5085 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_160887

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22588 1 1134 bp AK356030 Available Available None





CDS Structure of MLOC_22588






Contig Sequence (5085 bp)

>contig_160887 5085 assembly3_WGSMorex_rbca.fasta
CCCCCGGCCCGGCCCGCCCCTCAACCCACCTCTTTGAAGAGCAGGACATCCGTGAAGATT
CGGCGTCCCTGAGCTGAGTGACAAAAGATTTTGGTAGCCATGATTTCTAATAAATTGGGG
CATTTCATCTACTCCCTCTAGATGGAAATATAAGTCGGGCATGGGAATTTAGGTCGTCAG
TTTAACTAACAAAACATGTATAATATGCCAAATATATATACATGTTTGAAAGTTCATTCA
ACAATAAAGCTAGAGATATAATTTTTACGGTATACAACACAAGTTTTGCTAGTGAAATCA
AGAACCTAAAAACCAGTGCCCAACTTATATTCCCATCCAAAGGGGAGTATGATCTGAAAT
AACAGAATTGGCCTGAGTTTGAATGTTCCTTCCATCTATTTCGTCGGAACGGCAGACAGT
AATCAGGATTCACAAATTCGTTTTGTCAGGAATTTTGAATGTGAAATCGCCAACACAACT
TGACCGTCAACAGGAATAAATTTTTCAACAGCGTATCATATACTTGTGGCCTAAAAACAA
TAAGAATCTGCTGATTTTGGGTAACTGCTACGATTGGTCACAATTGGGCCTCCGAGTGCA
GATTTTGGCACCAACGAAATTCTCGTAGAATTACCAGCCGCTTTCACCAGATATAGTCAA
TCAGTCTTCCCTTCCTGTGCGCCAACCTCCTGCAGGTAGTGCTCCGCGTCCAATGCAGCC
ATACAACCTGCATCACCAATGCATTAAAAAATTATTCCACGTCACTAAAATGAGCTAATT
CCACAGAAACACGCATCACAGACAGATACTGCAGCCATATGACTGCAGCTTTCAAGTAGA
GAACCATAAAGAGTGCCATAGTTGGGAGAATGCAATGGGGCTCCTTTTTGGAAAACCGTC
AAGAGGCCCTTATGGTGTAATTTTAGAAAGAGAAAAATGATGGTTACATGGTGATGTGCA
GAGGGGAGACTCGTCAAAGCATGTCACAGTTCTGTGTTCATAAAGCCGGTTGGTTTTGAT
GTCCATAGCCAGGATATTGGGGCAACCTTTTCAAACAATGGCAGCAACCCTTATCCTACA
TCTTGATACACTACTCTTATTGTACAACTTTAAATCAAGAACCAAAGAGATGAAGCCATG
GAGGCTTCACCTTTTCACAGTGAGCTTCTATGTTGTAATGTGACACATCTTCATTGCAGG
GCATGTGATGGAAGAACACAATTATGTCTTGGTATATTACTATGATTTCAGTTGGTTAGC
AGAACTTATTAATCATACTCATCACATGACAGTTGAGCGTGAGACCTAGTCGCTACAGTA
ACCTCAATGGTTTAATAAATCAAATAATGCACATAAAGGATGATGCCATCAAACCTATGC
CATAAATAACAGGTGCCAGAGTGATGCAACTATACCATGCCTGACAATATCAACTAAATC
AATGCTGACAAATGAGGCTGTGGTGATTTCAATATTGACAATATGGCTTATAATTTCAAT
GCTTAAAAGATTCCAAAAAAAAATGTTACAGAAAAGCTGATACTCTAGCTTTAACGACTC
CGACAATCCTAGCCAGCCCCAACGCACAACAATCTATAAACTGCACAACGGAAACCCCAT
ATTTTTAGCCAGCCCCAACGTACAACAATCTATAGATTGCACAACAGAAACCCCAATTTT
GGAACATTAATATGGAACGGAGGGAGTAGCTTAAAGTTTTAGTATGATTCTAAATCCCAT
TGAGTGTCTCAAAGGATCTACTAAATTCGTTAAGTTATTCCAAAAAAATGTGGTCCTGCA
TGTTTCTCAAAAAAATCAACCTGGGTAACTTGGACAGATTGGACAGAACAGATGGTTTGG
AAAACAAAAGTGACTATATATTGCTTGTACTCCATATAAGGAAGTCAGCATACCAAGTCC
AAAATAGATGTTATGTTTTCTAAAAAATGAACCACCCTTAGTGCAAATTATCTGCTTTTA
ATCATGAAAGTGCTTCATGTTGCTTTGTTATCACAAAATCAACCACAGTGGGCTCTTGCA
CTAGCATTTTTTTAAAAGCCCTGCACTTGGATTTTGGTGTAGCAGTGACATGATTCTACG
TCTAAAATGATAGTCAATACTTTTGCAACCACATATAACAAATTAACATGTTCAGATTAA
TTGCCACAATGTCACAATTTAAGATTTACCCGCAAGGCTCGTTGAAGTCCTCTGATATTG
ATATTTTATTTGAAAAGAATGGTATAGAAAAAAGTCTCATGGTCTGAATGAGAAGCAAGC
AGATTTTCTTAAGGCTTTGTACGGTGAGACTTCGTTTGTACTGGCTGGTCACCTAATAGG
AACTAGGGGAAAGTCCCCATCAGACATAACGGTGAAAGGAGAGACCTAGTGAGAAAACTC
TGAAAAAACTAGAGGATGCTGATGCTTATAGCCTTATAGGTCAATTTTACTTTCAAGTAA
ACACATAGGCTACATGGGCTGCTGCCATTCTGATATTACTTCAAAGAGAACATAACCAAA
TAGCTTGAGCTACTAATCATGTGGGGCTAGTTTTTCATTCTTCGGCAGAGCAAGTTGTAA
AAAGAATCCAAACATGCCCAAAGCTCTATGATTCGGCTACTCCAGTCTGGGCTTAGGAAA
GTGTAGGGAACAACTTCATGTATATACAACCAAAATGGAGCATCTCCTATTATTCCCCAA
AGAAACCACGACAGCATAACCCTTTTCATGTGACTACTATGGATGCAGCTAGAAGGGAGA
CATTAAGAAAAATATCTAACCCCTATTATTTAGTGATAGCAACACCATACCAAACAAGAG
TATGCTATTGCTCCCCAATCCCACACATAAGGGTAAGAAATTCACAAGAGCAGGCCCAGT
AGTTCAGATTTCTCTAGTTGACTCCATGGCATATCTTCAACAGCTGATGCATCATAAAAT
CAATACACAAATTACCTACTATACTCAAAAATATAATTACTAGGAACTTGGGTAGGCTGC
ACGAAAACGACGTAGCTAGAAGAGGGTGCCCAAAAAAAGAGATCACAGGTGGACAGTGTT
CTTCAAGATGGTAGCTAATAGAATGCAGAGAGTGACCTAGTAAATCAAGGTTGATGACCC
AACTAAAGTGGGATGACTCCTTATATACAAGCAATCAAGGTTGATGACCCAACTAACGTG
GGATGACTCCTTATACAAGTAACCAAGGTTGATGACCCAAGTAACGTTAAATGATACCTT
ATACAAGGCAAGTGTCTTTGGAAAAGAAAAGGGATAATAGGAGAAGCAAGAGCAGGATGA
ATCAGAGGTCCTCTGGGCCGGACTTTCCTTTCTCCACCACCTCACTCAATCCCTTCCTGT
CTCGCTCGACTTGCTCCTCCCATAGTGCCGCCTTCTCAGAAATCCCCTTCCTAAGTCTTC
AGAAAAGAAAAGGAATAATAGAAGGACAACTGAGAGGAGGATGAATCAGAGGTTCATTGT
GCCTGGCTGCCCCTTCTCCATCAGCACACTCAGTCCCTTCCTACGATGCTCAACTTGCTC
CTCTGCTAGTGCTGCCTTCCTAGGAAGCCCTCTCCTCCCGGTCTACCTCTCTCGCTTGTG
AAGCAGTTATCAACTGTAGCGGTTGGCAGCAATGAGCCGATGACCACCACAAGGAACAAC
AATGGCAGGAACAAAAATGACATAAGTCAGTGGCCTTAGTGGCTACGCTGCATCACTCTC
CTCTTCCCATATCATCTGATCTCATCCCCCTCCCTCGATCATGATAAGTGGGGTACAGCT
AGCTAAGCATTCAATGGCAATTCACAATGCAGGATCCTGACCCCAGACCAGAATATACTT
AAACAGCACAAATGACTAACTCCAGAAAGGAATACCTATTTGGTTATTCCTTGCATATGA
GTCTCTATTAAGGCTTGGTGCAAAAAAACAGCACTGGAGAGCTACATTATCACGTATTAT
GCCTACTGTTTGACTTCAAATTCAATGGAGCACAAATGCTTGAAAATGAGGTAGTAAATA
GAATATCTGATCTAAAATGCTGAACCCGACAGAAATTTCTATATTTAAACTAGACGTGTC
AACCATCTGCATGTTCTAAATGAGAAAACTACATTGCAGGAACGTATTTAATTCTAAATT
TATCAAAACATCATACCCATGATTGGCAGTGATTTCTAGTCGTAACTAATAGCAATGGAG
CGTCATCAAATGCAACTTAAACAAAAGTCTGAAAGCATTTTATATATACCTGATCCTGCG
GCAGTAATGGCCTGGCGGTACTTCTTGTCTTGAACGTCCCCGGCAGCGAAGACCCCCTTC
ACACTGGTGTGCGTGGAGCCCGGCTTCGTGGCCACGTACCCCTCTGAGTCGAGCTCGAGC
TGTCCGGCGAGAAACTTGGTCGCTGGCTCGTGCCCAATGGCAAAGAAGAGGCCGGCCACC
TGGACGTCGGATACCTCGCCGCTCACCAGGTTTTTTACCTTGACGCCAGCCAAGGGGCCG
CCGTCCGAGCCGCCGTAGGCCTCAACGACCTCGGAGTCCCACACGACCTGGATTTTGGGG
TTGGAGAGAGCCCGGGCCTGCATGATCTTGGAGGCGCGGAAGGCGTCGCGGCGGTGGATG
ATGTAGACGCGCGAGCCGTACTTGGTGAGGAAGTTGGCCTCCTCCATGGCAGAGTCCCCG
CCACCGACGACGGCGATGGGCTTGTTCCGGAAGATGGGCGCTGCACCGTCGCAGACGGCG
CAGGCGGAGATCCCGCGGTTCCAGAACGCGTCGGAGCCGGCGAAATGGAGGCGGCGGGCG
ACGGCGCCCGTGGCGACGACGACAGAGTCGGCGTGGACGACGGTGTCGTCGGAGGCGACG
CGGAAGGGGCGGGAGGAGAAGTCGACGGAGGTGACGGTCTCGGAGAAGATCTTGGTCCCG
AAGCGCACGGACTGCGCGCGGCAGCGGTCCATGAGGTCGATGCCGAGGATGCCGTCGGGG
AAGCCGGGGAAGTTCTCGACGTCGGTGGTGGTGGTGAGCTGCCCGCCCGCCGCGATGTCG
TTGGCGAGCCAGCCCTCGAAGAGCACGGGCTTGAGCCCGGCGCGG