| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_160854
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22565 |
4 |
1081 bp |
AK372747 |
Not available |
Available |
None |
CDS Structure of MLOC_22565
Contig Sequence (4430 bp)
>contig_160854 4430 assembly3_WGSMorex_rbca.fasta
GTTATGGCTGTTTCAGGGGGGGGCGGGAGTACCGCTGGAGCGGTACTAGCTCCCCCTGGG
CGGTACTTCCGCTCGACGAAATAAAAAGCCCCCCCCCAACACCAGAGAAGAAAAACAAGC
GGAAGAGGGCCCGACACTGGTGGGCGGCAGTACGCTGGACTGGTACTAGCGCTCAACAGG
GCGGTACTACCGCTTGTGAATCTTCATGGGCACTTAAATCAGGGCAACTCCTTTGCTCCG
CAAAAGGGATGGGGAAGAAGAATGAGAGATAGAGTTCCACCTAACGTTTTCAAACGTGAT
CCCCTCTTGATAGTACGAGATTATCTATGAACTGAGTCCACCAACCCTAAATCAATAGCT
AAGCACCGTCTTCACTTTTACTTACTGAGGGGAATATAACCGTCTCGTGCCACCTGATAA
TTCTCTGAAAGCATATCACACACGATTAGTCCGCAAAGGCTATCGTCAATAACCACCAAA
ATTACCTAGGAGAAATTGTGCTCTTGCAAGGGGTAAACATGTCATTTTGTTCGTTTTTGG
AGCTTGTCGGGAAAATCTTAAACGACTTATACTACCGAATGGAGCGAGTAATACATTATC
TACAAGCTAATAAATACAACCACCTATGACATTATCTCCACGTTACTCCATACTATAAAG
GTAGCAACATAGACTAGTGTCTACTTTAAGTTATTCCCCATTATGACTAACCTGAGACTA
CCCATAGTGGGGAGTAACTTCGACTAGTAACATATGTTACTACCTCTATGTTACTACCTC
TATAATGGAGAGTAACATATGTGTGGTGTCATGCAACACTTCATTTATTAGGTTGTAGAC
TCATCTTATCTTGATATATGTGATGTTACTCATAGAATGAATAACTCGCTATGTTACCAC
ATCATCTATTTTGCCTAAATATGTGTGATGTTACCACCTATGTTACTCCCACTGTGGGGG
TAGTCTGATAGAATGGAATGAGCTCATGGCAACTTATCTCTCTCATTGTGCGAACTCGGT
TGGTTCGGCCAACTCCAAAACGGCTAGGCCAACTTTGACATAACGACCCATTTCGTTTAC
CCTTTTTACTTTTTATTTGGCTCCGCGTGGACAAAGACGCGACACAAAGCGCCGAAGCAA
AATGGATGGTGTCTATTTTTTTGTCCACCATGATCCATAACCTTAAACGGGACAAGGAAT
AAATTGTACCACAGATTCAATCAACACCTCATTTCCAACAGCCACTGTTGAAAAAGGCAG
TGACTAGGAGACACTTAGGCACGCCTAGGTGCTAGGCAATTGCCAAACGCCTCGCCTAGG
TCATAAGCGAAAGCCTAGGCACAACATGCAAGAAAATGTCCACCGAGAGAGAAATCACGC
CATATTGCACTAACATGTCAAACAATCCATATTCCAATGGCAGTAGCTGATAGTTAACTT
ATTTGTATGCTTTGAATTAAGATAATACATATATAATAACCATAAACACATCCTAATAGT
AGAAACCATATTATCGCCTAGGCTACGCCTATAGCGCTTATGCACCGCCTCGGCACTAGG
CACATGCCAACCGCTTTGCTTACACCTACCACTTTTTCCAACCTTGCTAGCATCTCACAA
AAACTCCTTCATCCATCCCTTTATCTTCTCTCAATTTCGGCCGCCTCTCGAGTATTTGAA
GGTCCCATTCTATCTGCATCCCTAAATAATGGTCACTGAGATATTCATTATGGACCTGCA
AAGAATTCTTGACGACATCTCTAATTGGGCCTATACGCTCATTACTGAAAAGTTCGTGAT
TTACTCTGTGTCGTGAAGCATTGCAATATGTATTTAACTCGTTTGACAGACCCCTTCACA
TCAGCCATGAAAAACAACATGTTGCCATATACGAATAAAAGGTGGTTAATGGTGTGTGTT
GTGGGGCCACATCTTTATACGTGCCAACGTTGATGACTCACAACTAGATTTCAGAAGGCA
CGAAACACCCTCTCTGCAATCAAGAATAATTAAGAAGAAATTGAGTTTCCCTGTCAGAAC
CCTCTCATTGGTTTGAAAGAATCAACGATTCTGCCCAGTGAAAATAATAAAAACGAAACC
GAGGGAATCATGCTCATAACCACATCAATCCACTCTTGAGCAAAACCAAGCTTAGATATG
ATAGCTCTCGAATAAGGCCATTCTAATATGTCATATGCTTTCATCATATCAAGCTTAAGA
GCACAAAAACTATTCATCTTTGATTTTGCTTCTTTCATGAAATGCAAGCATTCGTAACCA
TATATAATATTGTGTTATTAACCAGCGAGAAATAAGTATCGACTGTTTTTCGGATATGAT
CTCCAGAAAAGGTAAGGTTCCTTTTCCTTTTAAAATCACTTTTTTTAAACAATTCAAAAT
CACCTTTTTTGAGATCTTTAAAATCATCTTTTTTTAAACAATTCAAAATCACCTTTTTTT
AGATCTTTAAAATCACCTTATAAACGACATTGCAGGGAGTTTTTTTTTTTAGGAAAGGAC
ATTGCAGGGAGTGATGAGCCTTAAGTGGAGGTGGGCTTGACTAGGCCTGGTGTCGCGGGA
AGCTCAACCCACTCCAGCAAACATCTATGGCCCAAGGTCCGTCACAAAACCTAGCAGCAA
CAAATCATGCCCACTGTTTTCTCGAAGGTAAAAGACAGTCATATAAACCCTTCGTTCCAT
CGCCGCCGCCGCCTACCTCTCCCTGGTCGGAAGGACCTTCGGCCACCCCTTTCTCCTACC
GCGACCGTGAAACTTGCGAGGTCAGCGTCCGCTTCGGGGAAGCTCAACCCACTCCAGATT
TGTGTCGTATTCCATGGGGAAGAGCAGCAAGAAGAACAAGGTCATCCTCGCGCCGCCGCT
GCCGCCGGATGTCGACGACGAGGACATCTTGGTCTCCGACGAGGATGTGGATTTCGTCGA
GGAGAATAGAGAGCACGTCCACTTGATCACCGGGCTCAACAGGAAGGCTCTCGACAAAGT
CGTCACCAGGGTCCCCGACCACGACGAGGACAAGGTCGAGCTCCTCTACGAGGAGCGCGA
GCGCAAGAGGAGGGCCGCCCTAGCCTTGAAACCCAAGGAGGACGATGACCTCGAGGTGGA
CCCCGTCGACGCGCTCCCTGTCAAGACTCTGCAGGGGGAGCTGCTCTACAGAACCGGTAA
AAATCATGCATGCCCACTTCTATTTGGTTCAGCAGAGCCGGTTGAGCTAGCCTAGCGAAT
ATGGTGTAGGAGCACTTGCTAGTTGCACAAGGCTTTGGGGAACCGCATAGCAAATGCTAT
AGATATATTAGTAAGTGAAATCATTTTGGGTCTGAGTTTCTACTAGGTTTGATTTTTTGC
ATTCAGTAGCAACAGGCTACCGCAGACACTTGACAAGAACACCCTATACAAGCAGAGGAA
GACAAGAATCTAGGAGATGTACCTACCACCAATGGCTTCCATTGTTCTTGGTCCATGAAT
TTAATAAGGTCTTACAACCTATCCTATTGTTGTTGTCCATGACTTAACAAGATTGTTTTA
GACATTGCTTGAACTAAGTACAGTTGCTGTGTACTCGCAATCAACATTGTGCCAAGCTTG
CCTGGCTCCATTTACAGAGCTTGGTGTGCCCTTTTGATCCCAGAATCATGGCATGTGCCC
TAGAGCGGTGAACCCGTGCTGCTGTATTGCCATTTGCAGAGCAAGCATTCAGGCCACTGA
TGCTGATCCAAATGGACAGACATGACTTATTGTTCTGCATGCAACTTACATTAATCAGGG
GAGGGGTTGGCAGTAATTCAGAATGGCATGAGTCAATACTATTGTGGTTATTTATTTGTT
GGCAAATTTTAACATGCTCCCTCTTACCCTCTTTTTTTACATGTGAGGTAAGAAAGTACT
CCCTCCGTCCCGAAATTCTTGTCTTACGTTTATTTAGAAATGAATGTATCCAAATACTAA
ATTGTGACTAGATACATTCATATCTAGACAAATCTAANNNNNGAATTTTGGGACGGAGGG
AGTAAGAGTTAATCAGACCACTAATTAATGTGATTAATGGCTCAGATCTACTATATACTC
TTACCTCTCATATGAAAAGAGGGGGTAAGAGGGAGCATGTCAAAACTGCTCTTATTTGTT
TCCGTATCTTGTCCTGTTAAAAGGAATGACAAACATGAATCTTTTTGATACTGTAATTAC
TGGTTTTATGACGCCCCTGTAACTACTATGTTTACCTTGTCCAATTAGACAGAAAGCAAG
TAAAAAACATTTTTTTTTCTGAAATATAAAGTGTTATGACCGGTACAACGTACCAACGGA
GGAGGCCCAATGGGCAGGGTTAATTACGGGCTTAGCCCAAGTTATCTTACCTATCTTAGA
NNNNNNNNTATATTAGAGTCCAAGTTAGAGTCCAAGTTACCTAGGGTTTA
