Contig Data
morexGenes
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Map Locations of contig_160732 (3280 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_160732

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22471 2 1220 bp AK248335.1 Available Available None
MLOC_22470 1 94 bp MLOC_22470.1 Not available Available None





CDS Structure of MLOC_22471






CDS Structure of MLOC_22470






Contig Sequence (3280 bp)

>contig_160732 3280 assembly3_WGSMorex_rbca.fasta
GAGGGTATGATATGTTTATCTCTCTCTTGTTTCTGTCTGCACTAGTAGTACTGCCTGTAT
GCGTAGATGTTTCTGCTATATGTGTAGTACTTGCTAGCATACTCCGTGATCAACATGTTA
TGAACCTAGTCAATGCCATGTTANNNATTATTTCATGGATTAATCTACTCGGAAAATTGC
CTATTTACTCAACACTTGCCCTCATTTTTCTTCCTTTCATGGGGTATATACCATATACGC
CGTGACACTGGTTGATGTGGAGTATTGACACACAATCCTTCCATCCATTCGCTCGTGCAC
ACCTTGTGCTCAATTAATTTACATTGCGCACAGCTAGGGAGAGGGCATCTCGCTCGCTCG
ATGATGATGATGATACAAATAAACACACAAAGTACGTGCAGCTACACGTTGATCCACGAC
GTACAAGTACACATGCATATCTCGTCCGATGGACAGACGGATGGCTGCTAAACACATTTA
ACTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCACGCGTTGTTGTTCACTGGGTCGGCGAT
GTGGTCGAAGAGGTTCTCAACCGGTCCCTTTCCGGTGACGATGGCCTGCACGAAGAAGCC
GAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTGACCTTGAGCTCGGCGGC
TGTGTCGGGGTCGTCGGCGAGGCCAAGTGGGTCGAAGGCGCCACCCGGGTAGATGATGTC
GAGGCCCTCACCGAGGGGTCCGCCACCAACACGGTAGCCCTCGATGAAGCCCATGAGCAC
CACCTGGCATGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAG
GTAGTCGAGGCCGCCCTCGGAGAAGATCTGCGCGCCGGCCTTGAACCAGACAGCCTCGCC
GAACTTGATGCCGTTCTTGGACAGGATCTCGGGGAACACGCACCCGAGGGCTCCGAGCAT
CGCCCACCGCGAGTGGATCACCTCCAGCTCCCTGTTCTTGGCGAAGGTCTCTGGGTCAGC
CGACAATCCCGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCGCCGGTCAGGTACGACGG
GGTCTGCTCGGAGAACGGGCCCAGGTACTTGGGACGGTCAGGGCCGTACCTACACATTCA
TCCATCCATCCATGAGCAAGGTGTGCATTAGTCGAATGACACGACGTATGCTCGGGGGCA
GAGTCAGGGAGAAGAGAAGCATGCATGGGGAATACTCCTACTAGTAGCACGTACCAGATG
CTCTGGGGCGCGCTCTTGACGGTCCGGCGCATGGTGATGCGGCCGCCGAAGTCGCCGACG
CTGCGGACGAGGTCATCGCGCCGCGGGGCGGTGCCGAGGAAGCTGGTCGTCTGGTGCAGC
GCCGACGCGGCCATTTCGCTGGTGGCTGGGGCTGCCTGCGAGCTCAGTGAGATCAACTGG
AGGATGGTGTGTGTGTGTGTGTGTTTGGGTGGAGATGTCCGGTGCGCGAGGTGGATCTTT
ATACGGCGGCTGAGGTGCGCCGGGCGCAACTGGTGGATGCGGGGCGCGACACGTCCGCGC
CACCCCATTGGCCGCCGTGATGCCTCCGGATATGGGTCGGCATCCGGCGTCCCCGGCGTG
GCCACTCGCCGGCCGCCACCTGGGGGCACACCGGATTTGCTCACCCACGGAAACTAAATC
AGAGAATACACACTCTTCCGTACACTAGTAATCGTGTACTAGCAATGCACGTGTTGTCTG
ATAGAGCAAAATTCAAATACTAAAATCATAAGAGCTTTAGAGCATAAAACTTGTCCACTC
ACTGAAAAATAAATTCATACTCCTACTATACATGACATCAAGGACATCTAAGGCTAAGGA
CATATTCTAGAAAGTCCAGTACTTACAAGTTACAAGTGGTAATCTCATCTCCTCTTGCTT
TTGGAGAAAATTAGTTTCCGAACCACCCTTTCAATCCAAATAGCATGTTGTGTGTTGTCG
CTACATGATCATAAAAAACATCATCTGTAATACTCTAGTACAACTTGAATTGATTTATTA
TTTCCGTCTAGAAACTCAAGTGTTTTTTCATCGCGGTTACACAAGGATTGGTGCAAATAA
AGGACCAAAGAGACTTTCTTTCGACGGCCAAAAGAACATGGTCTTGCTTATTATGTTTCA
AAATTGACTATTGATATATAAATGTATTCTTGATAATCAAAATATAAAACAAGAAACTTT
TTGATTGAATTGTTCATCACAAGAGCTAGGATTAACCCTGGAGCGTCATACAACGAAACA
GATACAAGTTGGATAGCTGATCTAAACAATAAATATCTATTACACCATCGACTAACAAAA
ACAAATAAAAACTCCAAAAGCTAGCCACCATTGACTTGTGTCATGGATTTGGTCCTCGAA
GAGATATGCCCATGCATGATGATCAGAGTTTTGCACCAAGTTAAGACAATCTGATGCTAT
GATCACCTTCTTCTACTGATCTTACTGCAAGACTATTCCTTGTATATCTATCCATTTACT
AATGCCTAGTCTGATTCCAGTTGACAAGTGGGTCGTAGTTGAGAAAAAATGCCTAGTCTG
ATTCCAGTTGACAAGTGGGTCGTAGTTGAGAAAAAGGACGGATGGACGTGTTGGTGGTGC
CTAGCGACCGGGGCGACCCGGGCGACTCAGGAGACGCCGGAACCACCATCGAAGAGGGGG
AGATCAGGCGAACCACATCGCCGTCCGATCTGGGGATCCTTGCGAGTGAACTATCTTCTG
CGGGGAAGGAGCAGCGGCTTCAGATCTCGCCGACGGTGCAGGTCAACAACCGCATCAAAT
GGAAGGCTTCATTTTCAGAGGTTGGCAAAACAGTTTGAAGGAAGGTATGATAGTTTTCCA
CCCGGATTCAAGATGGATGACACTCAGGGACGAGGAGGACGACATTCTCGCTGGTCGTCA
TCTTCAAGAGGGAGAGCTGATCAGGGAAGGTGCACATTTTCTAGTCGGCGTTTATTCTGT
CATTTGTGTTTCTCACATTTTGCAGGGTATACCGATAAATCAAGAAGATTTGCAGCCAAT
TGATGTGTCCTCGGATGAGGAAGAGAGATGCAAACCGAGACAAAACCCACCTAGGGTTGG
GGGGAGGTTCTGGGTACTTGCAGGAGAGGACGACGACGAGGAGGAGCAGCCATCACCGCA
TGAACCGCAGGAATTGCAGGACCGATGGCTGCCAGAAGATCCTAAAATATCTGTCAAACC
TGCTTTGATGAAGAGACGGGTCGATCAACAGAAGAAGTCA