Contig Data
morexGenes
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Map Locations of contig_1606735 (3253 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1606735

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22428 3 1072 bp MLOC_22428.1 Available Available LOC_Os01g56930.1, FRAME:-3, EVALUE:2e-150, 13101.m06039 protein eukaryotic aspartyl protease domain containing protein, expressed





CDS Structure of MLOC_22428






Contig Sequence (3253 bp)

>contig_1606735 3253 assembly3_WGSMorex_rbca.fasta
CGGGGACGGCACCGCGGGCTGCAATGAAGCCCGTCGTGGCTGCAATGGAGCGCGGTGGCA
GCTCCGCCGGAGCTGCAATGGAGCTCGGTCGGAGTTGCCATGGCTTCGTCGGAGCCGTCG
ACATTGCGTTGGAGCTCCGACGGGGCTTCAATGGAGCTCGATCGGAGTTGCGATGGAGCT
TCATCGGACCCGTCGCCAGAACGCCAGTGTTGCGTTGAAGCTCCATCGGAGTTGCAATGA
AGCTTCGCCGGTGCTGCACCGAAGCTTCACATGTGGCGTCGATGCTCCGTTGCAGCTTCG
TCTCGCTGCTGCTGTTGCTATGAAGCTTTTTGGTGACTTTTAATGTTGCCATGGACAGCA
CCTATAGGTACAGATCCATCGCCACATCCGACGTCCCCTAGCGCCAGATTTAACGGCTAG
CTAAGAAATTATCCGCCTGATCCGTAGCAGCGGCCCAACCTATTTTATCAACTCTCTTCT
ACTTGATGAAATTGCAGGAGCACCCTGCCCTCCAAAGAAAAACGCCTTCATGAATCACCG
TCACATATGAAACGGCAATGACATCCTACATCAATGCGTGCTCGCCGTCCACCATGGCGG
CCATAATATCCCCCTCGGTTTTCCTTCAGATTTGGAGGCAGAGGCAGCGGCAGCACGAAT
CGGGTTCATGAATAAATAGGACAACGCCTCTCAGAGGTGATCAGGTCAAAACACGTTCCG
AGCACGCCGCTACCATGAACAATAAACCCTTTTTTTACTTTCTTCTCTTTCTCCCTGTAT
TTTATGTACAGCAAGAATGCTTGTGCCATGGGAAGGAAGGGGCGCAGCGACATCGGCATC
AACCCCGTTCGCTAAGTAAAGAATGGGTGTGGTGGAATCACACTGTCAGGTCAGTCAGCC
AGTGTGCTATCTACTAAGCAAGATGCCAAAAATGAGCATATGCACAAGAGCGACCGCGAC
CCCGGTAGGCACCAGGCCGATGTAGTGTCGCGGCGACCCGTTCACGTCGAACTGCCCCGT
GTTCACGTACTGGTTCTTCCCCGACGAGGAGGTGACGTTAACCGACAATGAACCTGACAA
AGGCAAAGGAGGACATCATTAGCTACGCTAACCTTTCCATCAACCTGGGCACGAATCGGA
AGAGCTGATTGCTGAAATCACGGTGGTAGAGAGTAGGGATGTGAACTTACAGTCGTAGTC
CGCCCAGCCCATGCGCATGTTTCCCAAGTCATACACAAATATCTTATCCTTCAAAACAAG
ATCTGCGAGAAAGGGAACCAAATAGTAAGCAAGAGAACACTAGGAGTGGGAGATGGGCAT
TGCATCATTCTTGGGGCTATTCACACTAGATATGCTCGGTTAATAGCTGCAGTGAAGCTA
CTACTTACGGATTAACAGTCGGTTAATGTTTGCATGAGGTAAATATAGTCAGTCTTCATG
TTGGTTCAATATCAGGGGGCTCAAACGGCATGACTTCACAATTCACGATCATTTTCTAAA
GCCTGGATTGATCTACCTCGCATAGTTATGTTTCATATTTGGTGCTAGTATTGAAATTTC
TGTCAACAACTTAACTTAATTCAGATCTCCATAACAGAATAGCTGCCTTAAAGTATAACA
GCTACATGCATTACTTATAATGGCTAATACAGTCAACATGACTAACCTCCAAGTATAGTG
ATTCCCTGGCTTCTTTGCCAGCCAATGCACCATAATACAGTATTGTCCTACAAAAAGCAT
AATATGACATTATTTCATCTGAGGCAACTCCTCCCATAAACAGCTATTTAGACACACAAT
TGCAAAGAAATTTAGCAACGACGGCATCAAAAGGCTTGTTCACATACATTGGTACCCTGC
TGCAGAAGATAGTTCTCTGGCTTCACTGTCATTGCAGCGCCGCCCTTAAAATATAGTGTC
GCCGTAGGAAATGACGAATCAACACTAGTAGAGAAGCAAAAGAACATTTGTGAGTATAAC
ATTCTGAATGACGTGCTCTGCTAATTTCTTTCTTAGAAAGAGAAAGAAGAAAACCTGCCG
CTCGTAATAAAACATTGTGTCCCCTTGCTGACAACAGAGCGTACAGATGGAGAGACTGCA
GCAGCTATCTGCACGCATCCATCATTAGAACTAATAATGGCATATTTAAGTAATGCAAAC
TAATCCATATAAATAAATGATGAAATGTGAGTTTACCGCGCTAATAAATGGATCATAGGC
ACCATCGACAAGGTATACTAATGTCGTTCCTGAATCCACAATTGTTCCTTGTGTATTTGA
TGTTGCAAACAAGGAAGAATCAATGGATAGCTTTTGACCACTAACAGCAATGCTTTCCAG
ATTCAAATTATAATGAGGCCTGCATTTCATTAAAAATACAAAAACAGATTAGAATAAATG
TTTCATAGTTTATTGCCACTAGAAATGTTATACTACTTCACAAGAATAAAAAAACTAGAT
ATATAGTTAGCCTCTCACAGGGGCATACTTAATGTCGGAAAATTAAAGATGTCCAAATAA
ATTCAGCTCGCAAGTACTTTCAGAAGAAAAGGAAAAATAGAAAACGAATGATGGAAACTG
TTGCTTTCCACTCATACACGGGTAACTACTGAAACAAAAGACAACATGCAGAATTCCGAA
GTTACACACTCAATAATTTCAGGAAAAGGAACTTACTGTGATGGAACAAGTGGAGTAAAT
ACTAATCCTGGTTCAACGATTTCACCAAGGACAAGAATACCACCACCATTATCTGAACCT
TTCAGGCAATGGGAGAATGTTTTAGGGGATACACCAAGAGAGTACAGCTGTGAAATGACA
GACAGTTCATGCTGTCCAAACCCAAAAATTCCATCAACTGCCCTATCTGTCTTCATCAGG
TCACCTGACTGTGAGTTGCTACATCTATTAAAAAAAAGATAGTTACAACAACGAAAATAT
TATTGACCCAGTTAGGGAGCAAGTTCCAATATCAAGGTGACGACTACACAAAATGGTAAC
CATAAACAGTTACTTTATAGCAACCCATGGTTTCATCAAACTAAGACCAGCACAAAAATG
TACTCCCTCCGTTCCTGAATATAAGACCTTTTAGAGATTCCACTATAGACTACATACGGA
TGTATATAGACATATTTTAGAATGTAGATTAACTCATTTTGCTCCGTATGTAGTCCATAG
TGACATCTTTAAAAAGTCTTATATTTAGGAACGAAGGGAGTACATACTAATCATTTTGCG
TGCTCGATTCATC