Map Locations of contig_160603 (5019 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_160603

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22377 1 693 bp AK375360 Available Available None





CDS Structure of MLOC_22377






Contig Sequence (5019 bp)

>contig_160603 5019 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCACCGACCCCCACCGCCCCCCCCGCCGCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNCGCCCGCGGGCGCTCCCCGCCGCCGCCCCGCCCACGCGGAGGGTGTTCGCCG
TCAGGGCCATGGCGCCCCCCAAGCCCGGGGGCAAGCCCAAGAAAGGTGCGTGCCTATCCT
CGCCTCTACCTCCGCGCCACCCGACATGGTTTCGCCCGACCCGCCTCGTCCTCTGGCTAA
ACTCTCTATGCATGCGCGTTGCTCTGCAGTGGTGGGCATCATAAAGCTGGCGCTGGAGGC
GGGCAAGGCGACGCCCGCGCCACCCGTCGGACCGGCGCTCGGTGCCAAGGGTGTGAACAT
CATGGCCTTCTGTAAGGATTACAATGCCAAGACGGCCGACAAGCCCGGCTACATTATCCC
CGTCGAGATCACCGTGTTCGATGTGAGCTTGCGCTGTTGATTAATCCCGCGAGTCTGAAT
GTTAATGTGTGTGCATTGTATTGTATTGATAAATGGTAATGCCGGTTGGTCCTCATGATG
TGTGTGGCATTGATTTGCGTTTTGCAGGATAAGAGCTTCACCTTTATCCTCAAGACACCT
CCTGCCTCAGTACTGCTCCTCAAGGCTGCAGGTATGCACCCTGTTGATTAGCATTTAATT
GTTCATAATTTGAGCTTCATGCACCAAAGTGAAGATGTATGAGCATATATAATTGAAAAA
AAAAGGGAATGTATTTTGCTATGTTGGTATGTTCGTCTCTGTGGGGGGAAGGTTGTTCAA
ATGCTACCAGAATATTATGGCTGAGTTTTAGTATCTGCAGACTGTAGAGGAATTGATTAA
TGATTCACTATGCCATTATGAATGTATAGACGACAATACTAACATACTTAGGGCTTGTTC
GGTTAATCCCTCCCACAAGGGGATTGGAGAGGATTGGAGGGGATTGAGGTGGATTTTGAC
TTGTAGGTGATCCCTCCAAACCCCTTCAAATCTCAAGGAACCGAACAAGGCCTTTAAGGA
AAGTAGTCTGTTCGATGCTACGTGTATAACAATTTTGCACACATGGAAGCTACTGATCCT
ATATCTGTATCGGAGGAACTGTATATGGACCTCTGGAAAAGATTCTACAGGGAAAAACCG
CTAAACTAATTCCTTGATTTAACACCTATCTGAATTATTTGGGTACGGCGCAATATGTAT
GACTCATTAAAATTTCTGTTCATCCAACATGGAAGTTTATAGTGGGCTCCAAGTTCACAC
GGTATTTAAGCTTCACCAAATTTGGTGTCCATTTCTTTTTTCCTAACTGATGTTCTAGGC
TTCCATTATCCATAAGGCATTGAATCACTGATGAGAAGGCGAAATAGGTCTTGAACCGCA
TCGCTATTCGTTATATATTGTACAGTTTCTTTTTGGTCTTGTACTTGGTACAGCTTAATA
CTGTGTGTTCGATTTAGAAATCATGAATTTTCTGAAACTAAAAGTGTCATGAGTTAGCCA
CTAACTTGGCACAGTATTGAGCTGACACCATCAACCTTCTATTTGGTGTAGTTTTATGCT
AGGCTTTATATAACACAGCTAAGTAAGCTAACGGTTCGTAATCTCCAATTTTCTTGGTCC
TTGTTTTCAGGTGTCGAAAAAGGCTCAAAGGAGCCACAACGTGAGAAGGTTGGAAAGGTG
ACTGTGGACCAAGTACGCACGATCGCCCAGGAGAAGCTGCCTGACTTGAACTGCAAAACC
ATTGAGTCTGCCATGAGAATCATAGCGGGCACTGCCGCTAACATGGGCATCGATGTCGAC
CCACCGATCCTGGTGAAGAAGGAGAAGGTGGTCTTCTAGTCAGCTCGCCTCCATCTGTAC
ATTTTTTGCTTCATTTTTGTACACAAATATGTTGTGGTGCACAGTTGTGATATTCTTCTA
GGCAAATTTGTAATCATTTGCTTCGGTATCATAGAGTGCTCTCGCGGTGCAGGTAGGCCT
GTCGACTATATGTTTTTGGTCACAGAAGTTTCATCATTTTGAAATTCATATCATCATTGC
TCTATTAACAATCTGAGAAGGGGATGTTCGCATGGTTTGTGCCCCAGTAGATAACTCAGG
TTTCAAGATCCGGCTAAGTTTCTACTGTCTTTTATTGCCCTGTGGCCGAAGTGTGAGGTG
GTGCTCTCGGCAGATGGATTCCGGCCCATTTCCCTTCAGAATTGCGTCGTGAAGATTATT
TCTCGGATCTTGACCACACGACTAATTTTTTTTTATTGAGTTCCTGGTTTCCTTTGAACA
GTCTGGCTTTATTGCTGGAAAATGCATGGCCGACAACTTCCTGTATGCGGCAGATTTAAT
CCATAGTTGTCTCCTTCGCAAGACACCCACGATTGCCCTTAAATTGGATTTCAAGAAAGC
CTTCGACTCAGTTAGCTGGGAGGCTCACCACTGGCAAGACAACGGTGTTGTTGAACGGGT
CCCTGGCAGGTGGATTTTGTGTAAGAAGGGGCTACCCCAGGGGGATCCTGTGTCGCCCTA
CCTCTTCTTGATATTTGCAGACCTTGTCCGCTAGCTAATTGTCAAGGAAGTGTCGCCCTA
CCTCTTCTTGATAGTTGTGGACCTTCTCCGCCAGCTAATTGTCAAGGATATCTCCGCCGA
TAGGTTGCTACATCCGCTTGTCGGTGACCTATCGTGTCCTGTTATACAGTATGCTGACGA
TACCCTTTTGCTTGTCCGAGCTGATTATGGAAGCTTTCTCGGCTCAATTCTATATTGGAT
GCCTTCTCTGCCGCCATGGGCCTAACCATCAACTTCCACAAAAGCACCTTGGTTCTCGTG
TGCGTCAATCCCACACACGCTACGCTGCTGGTTGCGGAGCTTGGGTGTCCATTATCATCA
TTCCCCCAAACCTATCTCGATCTACCTCTTTTTGATGCAAAACTGCGTGTTAGTGCCCTA
GACTTCTTGCCGACGAAAATTGAGCGGCGCATACGTGGATGGTGCACGTACACCCTTGAC
CTAGGAGCCGTTTGACTCTTACTTCTGTGGTTCTGGCCACGACCCCCACTCATGCCATGT
CGGTTATGCCCGTCCCCAAAGGCATTATGAACAAGATGGACCGCCCCCGAAGGGCCATGT
TCTCGAAGGGGGCAAGGGAGTGCTCCGAAGGGGACTGGCAGGTAGCTTGGCGTGAGGCTT
GTCATCTCCGCGAGGACGGGGGTCTTGGCTTGGTCAACATTGAGGTACAAAATACATGTC
TCCTTTAGAAGATGGTCCATAAGATTTTCAGTGGCGTCCGTACCCCCTGGACCATATGGG
TGCGCCGTTGGTACTTTGGGGATAGTCCTGATGCTTCAACCCCCTCATGGAAGGTTTCCG
CCTCCCTGGTCCCGCTCTATCGTTCCCTAACATCGATGAAGGTCGGCGATGGCGAAGGCA
CATCCATATGGCAAGATAACTGGACCTCGCTTGGTCAATAGGCAGCTGCTCTCCCCACCG
CGTACTCGCATTGTCTCCGCCCCGATTAGACTCTTGGGGACTTCGACCGGCTGGGTGCGG
ATGCAATTCTTGTGCACGATCGACTGTCTAGGACTACCGTGTGTGGAGCTCCACATGCTT
TGGTATGCGCTTGACCGTATAGGGTTCTCTTGAGAGAGTGATGAGAGGACCCTGGCATGG
GGTGGGTGTCTTCAGTTCAAGGCGGGGGCGGTGTATCGTTTGGTCACAATCTCTCGGTGC
GAGCTCCCCCTTCATGGCCTCAACTTGGAAGGCTTCATGCCCCTCAAGGTCAAGGTGTCC
GAGTGGATTCTTCGGCATGGCAACACTTGTACACGGGCCTTCCTTTTGAATTGGTTTCCT
CAATTAGATGACTGTCCTTTCTGCCTGGGGCATTTGGAGACGATCCTTCACCTCTTCTTA
GAGTGCCCCCTATTGCGTCTGATGTGCGCGTGTGTCCTCGGTTGTCGCCGCTTGCCCATA
AATTGCACTATAGAAAGTGTTTGGTGCGCTCTCTCTACCGTTCACCCCTCGTGGAGCCGC
CCTCTTCTCAGCACGACGATGTGTTCTATCCGCTGGTGGTCTAGAAGTCTAGGAATTGGA
TGGTTTTGATAACATTCGTACATCTGATCTTGAATTGCGGCATTCCACCACGAGCACCTT
CTATTGTGGGTTGTCCGTGCCCTCTACCCGGTAGACTCTACCCCGTTGCTTCAGTGGTGA
TTTTGTGTCCCGGGGCGATACAAACGTTTGGGGAACTTTGGTGTCCGGTTACGAGAACCT
CGTCAAAACTCCTGGGTCCTCGGGCGATACAAACGTTCGAGGAACTCCTGGGACCGCTTA
CGGCGACCTCGTCAAAACTCGTAGATTTTCTACATTCTCGCCAGTTTTGTATGCCAGTAC
TCACTCATTTTGGGTCCAAGGGCGATCCAAACATTCCGCGAACTCTAGGACCGGTTATGG
GTAACTCGTCAAAACTCGTAGATTTGGTCCATTCTGGCCAGTTTTGAATGATATTACTCA
CTGATTTTGGGTCCCGGGGCGATCCGAACGTTTCACAAACTCCGGGGATGGTTACGAGGA
CCTCGTCAAAACTCAAAGATTTCGTCCATTCAGGCCAGTTTTCTTTGCTATTACTCATTG
ATTTTGGGTCCCGGGGTGATACGAATATGTCAAGGACTGGTTACGAGGACCTCGTCAAAA
ACTCGCTAATTTGGTCCATTCTAACCAGCTCTCCATGCTATTACTCAGTGATTTTTGGTG
CCGGAGCGATACAATCTTTCAGGGAACTTTGGGGTCCGGTTACGAGGACCTCATCAAAAT
TCGGAGATATTATATATTCTAGCCAGATTTTGTGCTATTAGTCACTAATTTTGGGTCCCG
GGGCGATCCGAACGTTTCGCAAACTCTCGGGACCGGTTATGGGGAAATCGCCAAAACTCG
CAGATTTTGTCCATTCTAGCTAGTTTTCTATGCCATTACTCAGTGATTTTGTGGCGTGGG
GTGATACGAACGTGCCGCGAACTCCGGGGACCGGTTATG