| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1605611
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22339 |
1 |
628 bp |
MLOC_22339.1 |
Available |
Available |
LOC_Os05g02300.1, FRAME:-2, EVALUE:5e-17, 13105.m00194 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
CDS Structure of MLOC_22339
Contig Sequence (3709 bp)
>contig_1605611 3709 assembly3_WGSMorex_rbca.fasta
GACGGCGGCGAGGTAGACGGGGGCGCCGCTGCCGACGCGCTTGGCGTAGCGGCCCTGCTT
GAGGTAGCGCCCGATGCGGCCCACGGGGAACTGGAGGCCGGCCTTGACGGAGCGTGAGAC
GGCCTTCTTCTTCGGCCCGCCGCCGCCCCGGCGCCCGGCCGCGCCGGCCTTCTTCGGCGC
CTTCGCTACCGACTCCATCGCCGATCCAGAGCTCCGAAGCTTTTCCTCTTTGCTCTCCTT
TTTTTCGCCCCCTTTTCTCCCTGTCGATTTCCTCGGGGTTTTTTTTAGGCTTGTTTTGTG
CGGTGGAGTGTGCGTTTGTGCTTTCTGTGTGTTTCTGTTCTGTGTTTGTTCTCCGGGCGA
GTATGGAGGTTGGGGGGCGGTGCTTCCATCTGGAGCGCTGGCGTCTTGGGGTCGACGGAC
GCCAGCCGTTGGTGGGCCTCGGCGATCCGTGTGAGAGGGAGAGCAACCAATAGGACGATG
AGAGCTTGCAAATGTTTTTTTTTTCTTTGAGCAAATGTTGTGAGTGCTTGTGGATTGTGA
TTTTGGTTACACATAGATATGGCGGGGCTATTCGGCCTCGGGCTTTTTAGTTGGGCAGCG
CTATGCGTCGGCGCTTCGAAACTTTCGGTCGGTTGCACGCAGACCGCACCATCAAAACTG
TTCTTGCAGCAAAATACCTCGATGTAGCAAATTTTGATCACGATGCAGCAAACATCGGTC
ACGATTGCAATAAAAATATGGTTGTAGCAAAAAATATAAACGTGATCATAGTAAAAAAAT
ACGCCGATGATGCATGGTATCAAAACAAAATGTGGGTTGTAGTAAAAACAATCCGGTGAA
CTCGGGTTGCAACTCTGATAAACGTGTATGCAATTTTTTAATAAACGATTGCAGTAAAAA
TGATATCGGTTGTAGCAAAAANNNNNNNNNTTGTAGCAAAAGTAAAAAACACCGGTTGTA
ACAAAAAATCCGATGAACTGAAGCTGCAACCAAACGTATATGCAGCTTTTTACTGGTTAA
ATGTAGCAAATAGAAAACGCTTTTAGCAAATATAAACATTGGTTGCAGCAAATTTAGACG
AGAAAAAAGTTGGATGCCTAATCAACTGCATGCGCGGGTCGCGCGCCCGGCCACAGGCGT
TTCCTTTTTTAGTTTCTTTAGCGAGACTCATAAAAAGCTCAAAATAGATGAATTGTAGGA
TTTTAATTTACAAATATCGACATACTAATGTTTATATATATACTATGAGGAGAATAATTA
AATTAATGTTTTAAAACAAGAGAATGCCACTATATTGTATGTCAAGTCTGCTAGAGCTTA
GAATTTCAAGGTTGGGCTTTCTAAAAAAGGTATGGTTTGTGGTCTATATACTTACCATTC
TGGACGAGGTTTTTGGAATCATGATGGCATGTAATATTATTTTTTATCTTAACAGTGTCG
TAATTCTATGATCATGTCACTGTCGTATGGTCATATTATTGAAGTGTCAACAAGGGTCTC
ATACTATTGTTTTGTCGAGGATATCAAAACACTATAATCAAGGCTTCGAAGGTTTGTTCT
GTTAGGTGAAAGGGGCAATTTCTTTATCCTAACACGCAAAACTTGAGGGATATGCTTAAA
AAGATTAGAAAATGGTTTATAACACCAAACAAAAATCATGGGCCTAGCTCTTTATTTCAA
TATTTGTTACAAATTGACATCCATCTATTCAAGTGATGCTTTTCCATGCCGAATATTTTG
GTAATTTTTTTCTAAAATGTCACCTCTCCCTATGAAGATATGGTTATGGTGCACTTGCAA
TGCATAATATGGCAACAGTGTATCGGTTGCATTTAGCACCGGTTGTACAAGTGAATATAA
TGATACGACAAGCCTAGCAAAAATAACTTATAGAAAAAGGCCATCCTTGGTAATGATTGT
TGATTTCCCAATTTTTTATTAAGAACATTATAAGAAGGGAGATGAAGCAACTATGATAGA
TAGATGAGGTACAAACGTTTAAGATATTTTAGCCGATTTAGAAGATAAATTAAATTGAAT
GCATCATAGTAATTGTGCTTTTATGGTTTTCATTACATGTCTCACTCTGCAGTAACTACA
ACTAGGAATGATACATGATTCTATTATTATTATCCTAACATGGCGTGCACCTTGACTAGT
AAATACAATCACGCAGTATAGCTTTGCATTATTCAATTTTATATAACCAAAATCATACCA
GGGTTGCCAATAAATATTAGACCTATTACCTAAAATTAGTAGACGCCATGAATGCTAAAA
TAGAAAGCATATTAGAGTTTTCAAGAAATAGTAAACTTCATGAAATGCTGAGCTCTTATG
CATTCCATGTTGGCAATACATGATAACCACTCTGTGTAACTTTCTTTGTGTCACGAGGTT
TTATTATAGCCTTTAAAATTTCAGATACCAAAAATAAACAAGCCAAGTTTTATTACTACG
ACGATGAAATCTAAACCTCGCTAACCCTTGGAATAGTATAGATTTGAGAACTTGGCTTTA
ACATGAGTATGACCGTGTGTTTGATAGCAATTCGTGGTGCCTCCCGACCATCACCACATG
TGATTTACGTAGTCATGTGTACGTGTTGGTGCAATGTCTTGCCCCCTTGGGTTTTGGAAG
TTGTTGTGAAAAGTAGTAAAAGACTTATTTGTCTGCTAGTGCGCACAAAGATAAATAGTC
TCCAATGTATCGGGAACAATGCTACAGTTGGCGAGAAGTTTGGATTGACTTCACCGAGAA
GTATGTGCGTTGAAGAGAAGAGAGATATGCTTCAAGAAGAAACAATATAGAGAAGATTGC
ATGACAAAGTTGGCCTTAAAAAATATTGTGAAACTAAAGCAATTGGTATTTAGTGTGTCC
AAGAAGAAATGGCTACAGTCAAGAAGATTGAAGGTGAAGCGAAGACATTGCATTTGTTTC
GTTGTTCTTCTTTGTCTTATTTGAGTCATATGACCATATTAATATTGAGAGGGTATAAGT
ATTTTGAGACTTATATCTATTGTGATTCTTAGTCGAAACCTATGGGAGTTTGAGAGAAAT
CTCTTTGTGTGCTAAAACATTCAGCCAGAGACATTGATCTTCTGGGATGTGAGAGATATG
TTTCGGAACGAGGAGTCAACTTTACTTACTCCTCAAGTATAGTTATCGTGTGCTCAAAAT
CCGACCATTAAAAATGTATAGAAGGCCATTGGTTCGATAATTTGTCCTAAATGGTAATTT
TCATTCTAGGAAGGTTGCGGCTATATATAGCTAGCTGTTGTGACGTTGTTCGTTGGTTGC
TTCGCTTGAAATTCCAACAAGATTGTTCAAGCACCCCTTTCTAAGAGATACTAGTAAAAT
CCATTAACAAAGTCAAGACGGAAACTTAGGTAGTGATTGAGCATTGCTACCTCTTGAGCT
TGCGTTGGTTTTCCCTTGGAGAGGACAGGGTGATGTAGCAAAGTACATAAGTATTTCCCT
CGGTTCGTTGAGAACCAAGGTATCAATCTAGGAGGAGGAACAAGCGAGGCTCCAATAGTA
GTACCTACATAAATAAACAAACACTTGCACCCAACGCTATAAAGGGGTTGCCAATCCCTT
GATAGAGAGATATAAAATATTCATAGATCTGAAAGTAAGACTAAAGTAAATAAATTGCAG
CAAAGTATTTTTGATATTTTTGATTTATAGATCTGAAAATATAATAAGG
