morexGenes - Barley RNA-seq Database

Contig contig_1604994

Source Contig contig_1604994

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1604994 (1068 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1604994

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22296	1	260 bp	AK358920	Available	Available	None

CDS Structure of MLOC_22296

Contig Sequence (1068 bp)

>contig_1604994 1068 assembly3_WGSMorex_rbca.fasta
AGCCAGTGACCGAGGCTCGCCGCCGCCGCTGCTCAGCCAGTGATCGAGACTTGGGAGAGG
GATGAGCGCCGTCGCCTCCCCCCCTGAACTGTACTCTGTATGTCTGTGTCTGTCAGCGTG
TGATCTGAATCTGAAGAAGAAGAAGGAAAGCGCGTGCGAGGTCAGTGGTTTGCTGACGTT
GCCGAATGCTTAGCTCTGTTCTTCCTCTCTCGTGTTATGCTTGTACAGTCTCTTGATCCC
TCCTTCAGCAAACCGTGGCCGTCTGAACTGTTCCTGAGTACATGAATGAACACGTAATAA
GAATTCTGAACTTGACAAATGAACAAATTCCATAGTACGTCATGCAATCTACTCCCTCCG
TTCCTAAATATATCTCTTTTAAAAGATTTCACTAAAAGACTACATACAAAGCAAAATTAA
TGAATATATACTCTAAAGTATGTCTCTATACATCCGTATGAAGTCTTCTAGTGAAATTTT
AAAAAGACTTATATTTAGGAATGGAGGAAGTACTTACATCTTGATTATTAATCCTGTTCA
TGATTCTCACAAGTTCATTGACTATACTCAGAGAAATTATGTGCATCCAGCGGGGTAAAA
TGTTTCAGTACTTGTCAACAAAACAGGAGGATCACACAACACAGATTCGTGTTACACACC
AGTTTCTCTATCAACACCCTGTTGGATTTTTTTGTAAATAGGCCTTTGGTCGAAGGGTTA
ATTATCCTTTTGCCCTGAGTGGTGCCTCTATGCTCAGTTTTGCCCTCAATTGTGAATCGT
GCTCAGTTTTGCCCCTAGTCTGTCAGCACCGATTCACTTTTATGAACACTGTCGTCTCTG
TTAGATCAACGTTTTAACTTGGCCCTTACAGGTGGGACCAGGCGGCAGAGACGCGCTAGG
TGATCACACCGTTGCTCTCATGGCTTGTGGGACCCGGCAAAGAGCCGTGCGTGTAATGTA
CTTCCTCCGTTCCTAAANNNAAGTCTTTTAAACGATTTCACTAGCGGACTACATACGAAG
GAAAATGAGTGAATCTACACTCTAAGGTATGTCTATATACATCCGTAT