Contig Data
morexGenes
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Map Locations of contig_160441 (4323 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_160441

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22250 2 2272 bp MLOC_22250.1 Available Available LOC_Os12g02730.1, FRAME:-3, EVALUE:3e-13, 13112.m00216 protein histidine triad family protein, putative





CDS Structure of MLOC_22250






Contig Sequence (4323 bp)

>contig_160441 4323 assembly3_WGSMorex_rbca.fasta
TTATCCTCCAAACCCTCCAATCCAGAACTCGACTGTGTTAAGGGAGAGGAGTTAAATGAG
GAGAGAGAGGACTAATCCACATTTTAGTAGGGGTACCCCTGACTAAAAAAAAAATTAGTC
TCAATTTTAGCCCCTCTTTAGTCAGGGGTGCTTGGAACTTTGGCCTCTTAAAGAGACTAT
TTTTAGTCAGACTAAAATAATTCCCTTGGATCCAAGCACCCTCTTAGCTCACTGGGGGTT
GGGTAATTAAAGAGATCGAGAGAAGGGGGCTTGCACCTTTCCAATGCATTTTTTACTCCA
CTTCATAATTTGTCCTAAAATGTCCTATATGTACACTTTTCACCGGACGGAGGGAGTATA
TTAGTATGAATAGGTTGCCCACTTGAACTAACTGCTGCATAAAATTCTGCGATATTTTCA
TAAGAAGATGAAGATCAATTAATTGCATGACATGACATTTAATATTATTATTTCTAAAGA
ATTATTAATGGCAGTTGTGTCAACCACTTTTTATAAGCCACTCACATGAAACCAAATTCT
AGCATCGACATCCTTGATATCTGGATTCTATTTACATATCAATGCAAAAGACTAGGAAAA
TATGCATACAATATATTCTTAAAAAGGAATCAGTCATCCTTTTCTGTTGGAAGTGTCTGG
ACTGTATCCATGAGTTTTAGTAGGCATAATAAACAAGCAAGTGAATCAAAGTTATTGATG
GTATGACAAAACGAGGAGACCCCATCCAGGCATGTCCTCATTAGCATTCTCATAAAGTCT
AAATATCGTCTTTGCCAAATCAAAGGATATGACCTGCAGAGTAAGATTGACATAGGTAAA
TACAAAATAGCAGCCAGAAGTACAAAAGATACAAATCTAAAATTACAAATAGCTGTTGTA
GAAAATGGAAACAAAAATAAATCGACCGTTCATGAACATGGTGATTTGTTCAAACAGATA
ATTTAAACGGCTTATATGTCTAAGAACTACTCCCTCCGCCCCGAAATGTAAGACGTGTTT
TTATACTACCATAGTATCAAAAAATGTCTTGCATTTCGGGACAGAGGGAGTACATAGGAT
GGCATAAATGGGTAGCTAAGAACTATAAAGGAAATCATGCATTGCAGGATCAAGAAGATG
GGGTCTAGGAACCATGTACGGATAAAACAAAACAAGCCACTCCAGCTCGATGGTGTTTTT
CCTTGTCTTTTGGCAAATGAAGTGTGGGAGGGAAGCATGGCATTCTCTTAAGCAAATAAA
AAAGCTTGACTGCAGAGTAGTACTTAGACATATTTCTCCCAGGTTAACGTTGAAGCTGGC
AAATAAAAGAATGAAACCCGTTCGCCTACTTATTTCTCCCAGGTTAACGTTGAAGCTAAA
GCACAGCAGAAGATCTCCATTCTCGAAGCTGGGCATAACTTCCCGAAATAAACGAAATTG
GGATCTAATCTGTCTATCAATAGTTAACACGGTCCAGTGTGTTTAAATTATTTCCATAAT
GGTCTGAAGAGTGAATTTCTTATCTATCATCTGGTCTAAACAAATCTTATGTGTCATCAG
CTGCATCCGCAAGGGCGGGCTAATTTTTCTAAGCATGTGTCGCATGCCCACATGCGATTC
ATCATCGAGATATATACCTACCGTGATTCTAGGTCAGGAGCCGCAGACTGGCATTAAATT
TTCTAAGAATGTGTCGCATGCTCACAAGAGGCGAGGCAGGGGAAAGGGGCGAAGAAGGCG
CCGAGATTACCAGGGAGGAGGGGGCGGAGGTTGACCATGGCGTACGAGAGGGGCGTGGCG
TGGAAGACCTCCCTCGCGTCGATCTTATACGGCCCGAACTTGTACCGCGGCGGCTCCTCC
ATCCTCGGAGCGGGGAAGACGAGGAGGAGACGGAGGACGAAAGCGGACGCAGGCAGCAAG
GAGGCCGCGGCGGCGGGGCGACTGGGGAGAGGGCGGAGAGCTCAAGCTGCCTGCAGATAG
CGAAAACAGCGACTTGGAGACAGCTTTTTGTGAAGTTCGTCCCCCAACCCGAAAGCGTCG
ACCGACTGATTTCGTGCAGAAATCACTAGCGGTCGGACCCGTCCCTCCTGGTCCCGTTAA
CAGCGTCTCTAACAGACCCCGTATCTATATGTTCCTGATTTTTTAATTGCGGGATCGTAT
AAAATTAATTTGCAGAAACGCATAAGCTCACACACAACATGATTGATATGTTTGAGGGCG
GCTGGCCAGCAAATGAAGACGGTAAGGCGCGGGCAACCGTTTGTTCGGAACGACAGTGAA
GGTAGGATTGACGCCGGAGAGAGGGTATACGGTTGGGTTCAGCATGACGACGTCGAAAAG
GATTCTGGTGTGGATCTGGGGGTGAGGAGAGCTGATGATGGATTTTGGATATAATATGAG
ACTGTTGAGTGAAACGGGGGCGGACAATGGGGGTGTTGGCAGCTTCAGTAAAAAGGGTAA
AAAGAGAACATCGGTCGCCCCGCGGAAAGCATGTGCAAACGATTGCATCTATGAATCTGT
GTGCACAAAAACCATAAATTTGTTTGAAATGAAGACATGATCTCACCATTTCGCCTTGAA
TTTTTTTTCACGATACACAATCATCATTATACCCTAGTATTAATTTTCTCATGCATTTCG
GGACTCGTTTGCTATTTTTAAGTTTTTTTTGTATTTGTTATGCATTTAGTGCATATAAAT
CAAATATCAACTATAGCTACATGTGGATGTTGGTAAAGAATGCTCTATAAAATCATTTAT
GTGTCATTTTGCGTGTTTTCATTCATTGCACAAGGTATTGAAAGAATTTTCAAACGTTTC
GGTTACGAGATGCGCGCACCAGCGTAGTGCTTGTTGGTGCACTAATTGCAAGAAATGCAA
ATGGACTCCCCAAATCACAGAAGTCGGTGATTCACCGTGGCGTGATCTCAAGACACCGTA
TAATTTTTTGGTAAAGTTTGGCACATGTGTGATGACCGCTCCTTGAAAACCAGAGCATCT
CACAAGAAGAATCATAGTTTTCGAAAGGAGACATGGCAATTCGAACTCCAATCGACGGTG
ACTTCATCGCTTCGCCTTGAAATTACTCCCACGACGGGCAATCACCATTGTACGCTAGGT
TTGATTTTCTAGCACATTTCAGGGCTCATTTGCTATATTTAAGCTCTTTTAGCTTTTATC
GGTCATTTAGTCATACAAATGAAATCACAATTACAACTACATGTGTTGACGCGAGGGATA
AGAACATCTGTAGCAAACCCCTTATATTGCGTTGAACTACAAAATAACCGTCAGTTTACA
ATTTTGCGCCGAAAAAATGGACCGAAGAGACACCTTATACGCCCCTAGTAAATTGCGCCC
CCCCGAGTCGCAAAAACAAAGGTTGTCCCCCTACCCCGTCGACGCTATTGATAACCCACA
AATGTAGAGGATCGTTTGTAGCCTTTTTGATAAGTAAGAGTGTCGAATCTAACGAGGAAC
TAAAGGTAGAATTATTACCATCGATACAACTCTACGCATACTAATGCTTACTTTACCTAG
AACAAGTATGCAACTATTTGGCGGGAATAAAACTAGAAGTGCTTTGTGTTGGGGATATTA
TCCTGTTGTAAGACCCGCCCTGTGGGCCGGGTCAAGATAATGGCGGCTCTATCCCTATGG
TCAAGATGGGCCGTTATTAAAGAAGCAGAAGGCGTCCGATGAGACGGTTGGCCCAAGACT
CAACAAAGGCGACTTGCAGTCCATGTAAGGAAAAAGACACCAGAAGTTTCCTTGCGTGGG
AGACAAAGCAAGTTAGAGATAAACCAGCTTACTGATTGTAATGAGAGTTGGGCTCTTGTA
AGACCTAGAGCCTCGACCTGTATNNNNNGGCGAGTCTCTAGGGCAGATAGGGTTAAGTTA
ACATCAATAGAGAGGTAGGTCATGCGAATCCGCAACCTTGTAATCGATTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGCCGAACCTGGGTAAACTT
GCCTCACATTTCCCAGTCAATCCCTTTGAGTCGCCACATAGCTGCAATGGCCTCATCACT
AAGTCATTTCACGAGGACATCTGCGATGACAAAACCACGACAGTTGGNNCCCACCATGGG
GCCTGCGCACGGTGAAGTTGAGTTCTCAAAGGGAGCCCTTCCAGGGTTCGGGAGCTATGC
GGACGGCCTTATGACGCAGAGCCGCCGCGGAAAGTACTAAATCGACAACTCGGGCTGGGG
TCCCGAGGCCGAATCGATCGAATCCGGGTACCGGGTCCCCTTCGGCAAGATACACGTCTT
CAT