| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_160414
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22225 |
1 |
793 bp |
MLOC_22225.1 |
Not available |
Available |
LOC_Os06g32550.1, FRAME:-2, EVALUE:1e-27, 13106.m03361 protein THION14 - Plant thionin family protein precursor, putative, expressed |
CDS Structure of MLOC_22225
Contig Sequence (3763 bp)
>contig_160414 3763 assembly3_WGSMorex_rbca.fasta
AGTGTAGAGAAGTTAGCGCTTTTATATGTAGTACTAGCCCGAACTTGTTTGTTGAATGCC
ATAAATATTACCAGGATATGTGCCAAAGGAAAAACCCCAACATTAAAGTCTAAAGATTAT
GGATTATATGATAGACATATGACAATTTGCACTCGATCCTAAAATAGTTCAACAAAAAAT
AGTTCAACAAAAGATCAAAACTAATATGTGAAGTGCATTCTCGTAGAATGCGGCGGCAGC
TCCATGAAGCAGGTTTACAGCTCGACGTGGCTTGGATGACAACCTTGGCTGCATGGGCAA
TAGGGTTTTCGGCTCGATTAACGCATCCTAGCGGGGGCGGTTGGATGGTATGTGGGGGCA
GCGGCCATGGATGTGGTGCGACGGACGTGGTCTATGGACGGTTGACTGTAGGCAGCTGGG
TCATAAGGTGTTGCAATTCGAAAAAAGTGGTGATGTGTCGGGGTGGCGGTCCTGGAAGGC
TGTGTTGATTGAGTGCGTAGAGCGAAGAGGTGGATGTCGGGGTGGCGACCCCGATAGCTT
GGCAGCTTGGACTGCATTGATCTCAGAATCGTGTGGGCGATGAGGTTGCCGTCAAAGTTG
GTCATTGACATGTCATCTAGTGTATCCGATGTATGTCTTTGTGGGTACTTGTCTCTTCAC
CTCAGCGGGAGAGTCTGAGTCCGCTCCTCCCATAACAATGTTAACTTCATCTTTTCGGCG
GCAGTGGACAGTTGGCTCACTTGGCGGAGGAGGGCTTCACGTTGTTGTGTGTTTGCATGG
TTGGCGTTTGTTATGGTGTTCAGCCCATCGTCGACGGGTGTGGGCTTGTCCCAGTGTGTT
TCAATGTTTGGGAGTGGACTTCACCTTTGTATCGGTTTTAGCCAGGTTTTTCATAATTAA
CCGAGCAAAATCTGCTTCTTAATTAATAAAAGGGTCAAAGATCTTGTGCCTCATGTGTAA
AAATAAAAGCTCAGAGAATTGCTCACCAAAAATGCAAAAAAATTGATCCATTTCAGGCTT
ACGTCACGACAACACAGAACTTGTGCTCAAGCCTAAATAAAAAAAGGACTAGAGAAAATT
ACTTGAAGCATGTACTCATGAAGTTTATATCCACAGGCAAATGATACAACATGTACCATT
TTATCTCAGTCATGGCGGTACTTCACGGCAGCAACATGGCATTCATTATGACGGCTTTTA
TTCGAACAAGGAATGGAAATACACACACATAAAACAGGTTGACACACTGGTTTGGATACT
CTCGATGGGATCCAATTTTATTGAACGCAAAGGTCAGACACACCTTGCCCTGTGAAATCT
CAGACCATGGATACACATCATTAGGCAGTAAGGGATGTGAGGCCAGCATCACCGTTGCAG
AAATTGACACAAGCATCACCACAATTTTCCAAATAGAGTTTCATTTCTTCGTCGTCAGCA
GCTGGTGCCCAAATATATAGCATATTATGTGTCAAGAAGTAGCCTTTTCAATTAGTTTAC
AGGAATACACATACCAGATGAATTTTATTTACCTGCGTTGACCATGTAGTCACACATGGA
AGCCCTACACCCCAAGTTGCAATACTTGACGGTGTCTGGTTCATCTGTCAAAATAAAACA
TCTAGCATGTAAATATAATCGCGTATAAGACAAACAATTCCTCTCTTACAATACATTATC
GTCTTTGATATTGGCATCGTCTCCGTCATTCGCTTTTTATTAGTTATTTCACAATTACTT
TTCGGTAACCAGGCAACTCTTTTCTAACTTTTTTGATGAATCGGATCCTAAGAGACAGCC
TTTCGAAAAAAATACTTGTTGGTAAAAAAATACGAAAACTTATATTTATGGAAACGTTGT
TCATGGAAAAACTCATACAAATATCATCGGAAAAAAATTAAAAAAGTTCATTATATTATT
AGGAAAACTTAGAAAACTCTAACTCGCCATACGCTTTATATGATGGCATCTTATTTTAGA
AAGAACTAGTAATATGGAATATAAGGAGTTCATTCCCTTTACCTGAGTTGGACACAAGGG
CCAATTTGGGGAAGCCTGTAGGGCATTTTCCGCTACTTGTGAGTTTACACCTACAGACGC
CTGCGCATAGCTTCTGAGCACCACGGACGCGGCAAAGATTGTAGCAGTTTCTTCCTAGGG
TGCTCCTGCAGCAACTCTTGCCTTCTACTTGCACCTGTTCGAGAACCAACCCCAGTATAA
GTAAACACACCATCACACCCTTGAGGCCCATGGCTGGTTGGCTGTCTTGTAGAACACAGG
CTTTGGTTGATGGGATTACTGAGACTAGGCTTGGATGGCTCTTAGTTATAGGAGATGGTG
GTTGTGGCACACAGGATGTCCAAGCGATGGTTGTTGTAGGTAAATGTTACGTGTTCATGC
CAGCCGGACGAAAAACAAAACCTCTTAGCTGTTAACTACGAGTGTGTTTGAAGTGCTACA
CTCCACCTCTAAACTCTACTTCACTCCTCTTCTAAACTCCACTCACAATCATTAACCACA
TGCGACAATGACAAAATCGGTTTCTAGTTGCATATCACTCCTTAAACATGATACTTTTTA
AAAGAGCTTATGGACAAATATTGTACCTTGTCCTTCTTGCCATGCCAAGGAGCCGACTTT
GGCAATGAAAACAAAGTGTCGTTAATCACAGGCGGCAATGGAAAAAAGGCGACCTTATGG
CTGTCATCCATCCCAAGAGAAATTTGGTCAAGTGTATGATAAAGATGATGGTTATGAAAT
ACGTGCAAGCAAACATGTTTGTATCAAACCATCTGCGACCACAGTTCACATGGTAATGCA
TCTCTCAAAACCGAAACTTTTGGGCAGTTAGCTAGTTCTTGTCCTTATGTGCTTTAGGGC
CTTTTCAGCGCTCCACGGTGCTAAAAGTGTCACATCGGCAAAAAGTTAATGTAGCAAAGT
AATTAATTAGAAGAAGAGATAGCATGAAGACCCAAGGAAGAAACAACAATGTCAAACGAG
TAAATCTATGCAAAATATCATATGCATGCGGAATTTTGTTGCTAAACCATAAAATGGAGA
AATCTTAGCTAGAAAAAGCTAAGTTATGTACATGCATATGTGAGTTTAGTTCATAAGTCC
TTCGATGCACTTAGCACCTTGTCTAATCACCTGTGGTGGATCCAAAAACCTCTCGAATGC
GAAGCAAAGCACAAACTAAGGTATCTTAAGATGCCATTTTTAATACAAAGTCATCATATA
AAAATGTCTAACATAAGATGTCGTATCGATGCTAGATTCACTCATGAGTGAGCACCATTA
CTTTTTTCTAGAATGCAACTGACCTCTACCTGGGACCGGGAAAGTTTGTACGATGAGATA
ATACAATTTTGTTGGAAAAAAATAACGATGAATCTTTCACAAATTTGATGACGTGCGAAG
AGAAAGGAGTGGCATGTGTCCGAGCAGAAAATCAACACTAGTAGAAAACAGGGCTTTGGT
CGAGGCGAGATAAGAGATTTAATCCCGATTCTGTTACGAACCGGGACCATATCAGTCCCT
GTTCATGAGGCCAGGGCGTCGGCTGGGCCAGGGTCCCGGTTCGTCTGACTCCTTTGGTCC
TGGTTCCATACACGAACCGAGACCAATGGTCCTCACTCCTCGCGCAGCACCTTTAGTCCC
GGTTGGTGGGTGGAACCGGGACTAAAAGTCAGTCTTCTGTCCCGGTTCTGGCCACCAACC
GGGACCAAAGAGATACTTATATATACCCTCGCCCCTGCCCACC
