| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1603850
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22206 |
1 |
247 bp |
None |
Available |
Available |
LOC_Os11g26850.3, FRAME:-2, EVALUE:6e-14, 13111.m02571 protein erythronate-4-phosphate dehydrogenase, putative, expressed |
CDS Structure of MLOC_22206
Contig Sequence (3589 bp)
>contig_1603850 3589 assembly3_WGSMorex_rbca.fasta
ATTAAATCCAACACTATTTCATATTCAAATCAAGAAAACTCCAAGTCGAACTAAAATCAT
CCGTCATATAACATCACATAATACATCTCCCATGTTTACATAACACAATAAGTCATCTCC
TAAATACATTTCCTTACACATGAATATAGCAAAAGAAACAGAATTACACAATAGAACAAT
GGCACATCTGCTACTGTCACTACAATGGACTTCATTCCACTCTCCTAGGAGACATGCTCG
AGATGCGACAACTTGTCATCCTACAAGTAGACTCTCCTGCAATCATCTCTATTCGAGCCT
GAAAGAGAAGCAAATCCAATTTTATTTAGCAGACAACCAACAAATCAATCAATAAGTGAT
ACATGTTTGTATTTTCCGCATCAAGCACCTTTAACTTTGCGATTTGAGAATGCACAAGTA
GATTCGTTATTCCAGATAACAATTGTTCCCTCTTTGTAGTTTCCTCGACTTCCATCTCCG
GTAAGAGCTTTGACGACAGCATCACAAGCAGTACCGCGATACTGATACAGGTCAAATAGG
AAAAATGATGTGATACTAGTAGCAAATGAAGAACAACTGTATGCATCGAAAAAAAGTAAG
ACGGGACAACTAAATTGCAACACATCAGACCAACTTATAGAAGTCAAAAATAGCATTTTG
GTAGTTTATTTGGTACTGATTCCTGTCACACTTATCTATCACTGAAGAAAACTTACAACA
ACAACACTAGTATATGAAACTAGATAGGGTTCTTTGTACTAGATTCACGCCTAAAATAGC
ATTTTGGTAGTTTATTTGGTACTGATTCCTGACACACTTATCTATCCCTGAAAAAACTTA
CAACAACACCAGTATATGAAACTTGACAGGGTTCTTCGTATAAGATTCACGCCTAACTTA
AAATGATATATCTGAATCCATTCACAGAAACATCATGCACCGCACGTAGTTCATGATGAC
TACAGAACAAAGAGTGAGCCGCATCAACGTCGGGTAATAGACCAACATTTGCGTGAGGAA
ACCACGGGTGCCAAATTGACAGAGAGAAAGAGGGAGGTGACCTTAAAAGAGATCCATGGC
ATTGGGAAGAGCAGAGTCCCGAGAAGAAGCGCATGAACAGAGGAATCACTGGTCGATCCC
ACGCTCGAGCACCTCCAGACTCCTTCTCCTGAAGTTGCGGATGATTTGGAAGCGCTGTTG
TGCCTGCTTGGTGTTGAGGCCATCGTGGATGCACCTCTTCTTCTCAGACACCACCTACAA
AAACAAAAGAGAGAGTGGGAGTGGCATCAACTTCATGAACATGGCAACATGGGCAGGAAT
GTCACTCGGCCTTATGCCCTCGTGGATGAGCAACGTGGCGTCGCTGCCGTTGTCGATGAT
GAGGTCGAGGCTGTTGTCGGCATCCCAGTCGAGGTAGCGCTCGGTGCACCACCAGTACTA
CTCGAGGGTCTTTCCCTTCCATGCGAGGACAACGGCCGAGTCGCGCGCGATGGCGGCGAC
GGCATGGTCCTGGATGGAGAAGGTGTTGCAGGAGCACCAGAGCAGCGCTGGTCTAGATGA
GCACGGCGGTCTGGATGGTCATGTGGAGCAAGCCGGAGATCCTGGCGCCCTTGAAGGGAT
GTGAGGGGCCGAACTCAGTGCGGCAGGCCATGAGGTCGGGCATCTCCACCTCGGCTAGCT
CCAGCTCGAGGCAGCCAAAGTCGGCCTGGGAGAGGTCCTTGACCTTGTACTCCCGGCCCG
ACAAGGTCTTCTCCACGGAGAGCGCCATGGAGATGGTTGGTGGATCGGATCTGGTCGAGG
ATGAACAAGAGTGATTGAAGGGAGGGAGGAGAGGAGGTTGCAATGGTAGAGGGTGGGGGT
CGGTAGCGACGAGGTGGCCGACGGTTGGATCGGGGTCTAGGATAGACGATTGGATCAAGG
GGAGACGAGGGAGGGGAAACTTTGGTTGGGTTGCCGCGGCAGGGGAGAGTGATCCGGATC
TGGATCGAGCAAGGAGAGGGGGCTGCTAGGGTTTGGGTTGGATTGCATAGACCTGAGAGG
TGAATGAGAATCGTTGGATCTTTCGGGTGTGGATGGTTCAGATCGGTTATAGTGTGGTGA
TCCATGGGAAGAGCAATAATTGGTTCAAAAAACTATGATTTAAAATAGTTTTTAAGCAAT
AAAACTTGGGGAATTTTGTGAAGCAGCTATCAAAAATATTTTGCAAAATAGCACGACTAA
ATCATTTTTAGGTACATAATTATATATTTAATGAGAGAAACACCACAAAATTTTAATATA
TTGCACAAAAAATCAATTTCCCATTTTTCGATTGCCCAAAATAAGTTTTTTTGTGAATGA
CCTACAATATATTTGATGCAAAATTGGAACAAATGATTTTTCTGAAATACTAGGCCATAT
TTAATGTACAATTGACCAAATGGTTGGATAAAAAAAAATTGTTCCACCTCTCGTGAAAAA
GACAAAATTATGCTCATTCCGTAGGAATCGAGACAAATTTGAACGAGAGGTGCCTCATAG
TTTGCTCATGATTTTTTCCAAAAATCATTTTTAGATATAAAAGTAGTCATTTAATCACAG
ATCCAATTTTTTTCTGAAAAATTTAGTCCATAACTATGAACGGTCATGCCCGGTTTTTTG
ACCGCATTTTGAAACGGGCATAAGAAATTCAAAAAAAATGCAAAACCTTCGCCTTGTGTC
ATCATATGTGACCAAGTTACCACGAAAAATAATAAACTTGTAAGATGGAAATTATTTTTA
AAAAGTGTTCTCAGAAGTCATCTCACATCTGTGAAGATTCATGGCTTTGAAGCCAAATGA
TCAATCTNNNNNNNACATTCATGGCATAGTTTGTTAAAAGGATATCCTATTGTGCACAAG
GGTGTGTATTGGAAGGGCAAACAATTTTGCCTAAGTAAGTTTTCATTTACTTTGGACGGA
AAATTCATCTTCCATTTTCCGAGAAGGACCTACCAAATATTTGTTGTAAAATTGTACAAA
ATCATTTTTATAAAAATTTAAGTCTTATTAAATGTACAATTGACCAAATGGTTTGGTGTC
AATAGCTTTTGATCCACCTCTCGTGAAAAAGATAAAATTCCTTTGATTCACCTCGAAGCA
CGTCAAATTTGAACTACAAGTGCTTGATAGATTTCTCTTTAATTTTTCCAAAAATCATTT
TTGGGTATATAATTATCTATTCATGACATAGTTTTTTGAAATGATATAATATTATGCAGA
AGGGTGCATATTGGAATGGCAAACAATGTTGATTAAGGAAGTGTTCATTTTCCTTGTATG
TAAAAATTATTTTCCATTTTTCAAGTACCAAAAATGAATTTTATTGTGAAGGACCTACCA
TATATTTGNNNNNNNNTTGGACCAAATCATTTTTATAAAATATTAGGCCTAATTTAATGT
ACAATTGACAAAATGGTTGGGTGTTAAAAGCTTTAATCCACCTCTCGTGAAAAAGACAAA
TTTATGTCGATTCAGTTGGAAGTGGGTTAAATTTGAACTGCAGCTGCATTATNNNNNNCT
CTTTATTTTTCCCAAAAATCATATATAGGTACATAAGTATCTATTTAAT
