| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_160358
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22190 |
1 |
863 bp |
MLOC_22190.1 |
Available |
Available |
LOC_Os02g32660.2, FRAME:-2, EVALUE:9e-158, 13102.m03539 protein 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_22190
Contig Sequence (5466 bp)
>contig_160358 5466 assembly3_WGSMorex_rbca.fasta
CGGCGGTTAGGGTTTGCCCTGCTGCCCGCGAGAGCGGCTCGGGCGACAGGAGGGAGGGGT
ATCAAGTCCGGGGCCGTGACACATCCCAAATATAATCTCCCACACCAATCTAAGTGTGAC
TACCATATTGTTCTTAGGTACTTTGTGAATTGCCCTTATTACGTCCCACTCACATACAAA
CCTACGTGTGACTAGCGTAATTCTGTAGATACAAATTGTGTTAAGTTAAAAGTTAAGATT
GGATCTGCATCAGATAACCCTACATATAAATGGGACCTAGACCTATAGTACATGATATCC
TAGAATCAATAAAGAAAAAAGGGAGGCATGGCTCCTCACACCCTATTCTTTCTTGCACTC
ATGGCAAACCACTACACAAGGTTCTGCATGGCTACACTCTTAGAGTCGAGGCCATGAACC
AACTTGATGTCTTGTCCTTTGCACTGACATGACTATACTCTATTTGTGGACAAGTGATTG
ACTTTACCAAGGCTAATATTAGCGCCTTCTCTATTTATGTTTTGTATTGTAGTATAAAAT
AAAATGTGATCAACCAATTGCTCATCTTGACATCGATACTTCTGCCGTAAAGTTGATAAG
TACATACTACTTTTGGACATATTCGCTTGAGCATCAACTAATTTCAGACGAAGGAAGTAG
TTTTCTATACTCCCTCCATTCCCTTTTGTAGTGTGCATAGGTTTTTTTTTGCTCGCATTC
CAGTTATCCCTTGCGTGAAACGAGGGACACACATCAGAGCCTGCACATGGGTGTGGGGCA
GACCGTGTGCATGCAACGTCATTTTGGTACAAAGTACAGCTCCAGCTCATTGCATTGGTA
TAAGAGCTAGCAACCATGCGAACTATAAAATGAAACAGAGGGAGTATTTCATAGTGATTG
ACAATACTTGACATGTAAAATGCTCTTTTATCAATTTATAAAAACTGGATGATGCTTTTA
CTTATCCAATTCATGAGAAAGGCCATGGGAATTGAAATAAAGAACTAAGACGACTAATGT
GAACCTAACATGCCAACCACAAACTACATTAAGTACCTGTGAACAACATCCATCAGGACA
AGCAAACCAAGCTCGTGAGCTCTATCAATCAAGGATTTTAAATCTTCTGGGGACCCAAAA
CGGCTACTTGGTGCAAAGAAATTGGTAACATGGTACCTGAAATAGAAGTAAAAACACATA
ACAGTGGTGTTGTATTAATCATCAAACAGGAAAAAGGCAGAACTTAAAATACAAAAATGA
TTTGAATGCTATTTCAGCTTCCATGTCATTGGAAGTGAAGCTAATATGATATACTCCTAC
AAAGAACAAATCATTATGCTAGTATGGTGAGGAACATACTACCGCACTATGTGTGTAATC
GTATTGTTAGGTGGCTATCACACGAAGTATGTTATTGTAGACCAAACCAACCGGTGATAC
TTCCAGAGTACCAACATAGAGTTGGCCACTCATAGATGGCTACTCTGAATGAGAAGTTGA
GAACACATGGAGTAGCACGAAGCAGTAGTCTCTCACATAAACAAAATAAAGGAAGACAAT
AGCTGAAAAGTTGATATAATAGTTGCTAAAGTTGAAATATGTTCTATTGGCAAAATAGAT
AAGTAAAAGAACCAGAAATCGACCCAGAGAACTACCCAAAGCTTCCATAGTATGAATGCT
CTTGGATTGCCATTATTTGAACTGCATTGTATCCAAGTCTTTTAATTCTTGGAAGCACCT
CATCTCTGAAGTTTGCATATGTGTTGATCTTTGGTTCCTGGTAGCACAAAGAAACAAGTA
ATTACCCATGTGTTAATGTAAAAAGGCTACCAACAAGCATAGTTATTTTTATATTTTAGA
ACAAGAGCATAGCAAGCCACCACATTCATACGCATACGCCGAATTATCTAGATCGTTGAT
TATATGATTTCTATTGTTCTATTTCTGAAGTGAGACATGGAAAATAAATGTAATTACAAA
TGTTTGTAAGGAATGAGGTTAATTAGATTGTTGATGATGATAGGAATATGCAACTTGTAT
TTCTAAGAGGCCAAAGGCCAGTATATATGCATGTACAGGATAGAATATGCAGGAAACACC
TTATACAATAGGGTAAATACGAAAGGTTACATGGCTATATATATAGTACTCTAACACCCG
CTCTCAAGCTCATGGTGGATTAATAACAATGAGTTTAGAGAAATAGAAGCCATGATGCGC
TCTAGTCTGGGCCTTTGTCAGAGATGAAACATCAAACATGTAATACAGTGATAAAAATAT
GAACTTATACTAGCAAAAGATGTAACATTCACAGTTACATCAAGTTAAGCGTTTGAACAA
CTGGACGCCAGCTTTTGATGCTACACAATCTAACACTTCTCTCGAGCATTGAGAACATCA
TATTTGACTGAAATCACACTATTCCAGCATTTTTTTTTCAGATTCGTATTATCTAATTCT
TGATTGTCCACAAATTATATTTTTCAGATTGTATTAACCAAGTGGCATAGCAAAAAAACG
ATAATTTTTCACTTATAAAACAGAAGAAACGCAACAACACAAAAATATCATTGTAACAAA
CTGTAAATTAACTTGAACTGCATATGGCTAACATCATTTATGGAATACATGGTAAAGATG
AAATACCGGGCTACTCATGCCAACATGTGTTTCATATATCCGCAATGATTTTGGTCGTTT
AGGTTGAGGATGCTTGAATACATACTTCTCCTGCATATGCATGTAAGAATTTCATAACTG
GTTAGTGAATACAAACCTAAGATGCCAACAGCAAATAAGAAGTAGGACAGCTTGAAATAA
CATTTGTGAAGCTTCATGAGAAAAAAAATCATAATTTTCATTCCAATTAAAAATTTCTGA
AATCTAAAAGCACTAAAGATGAAGTAAAAATGTAAAATACCTCTTCAGGAGGGTCATAAT
ATATTCCATTGTATGGTATATCTCCTGGAGTCTGCACGGAGTACTTGATCCAAGCAGGAA
TTGAATCCTTTGTCCCAGATGGAGTATCCATCCGCACCTAGATGTTCAAAAGAGCTTCTG
AGTAATACAGGACATGTTCCTGAGACTAACACAGTTGGCAAGGAGAAGAAACAAACCTTC
ACCCGTGAGCCATGAGGAATTGGCGGCGAACCATCTGCATTGTTTGGCAGAAAAATCTCC
CAAATACCCAAGTCATTCTGAAACAATTACATTGAATATGAGCATTTGCAAATCTATACA
TGGAGCTACAGTTCAGGAGGTATGCAGTCGGCCTACTCCAATACCATTATTATGTAAAAC
CGCCCAGTGTCTTAGAATAACAAAAATCAGTAAATCATGCTTAAATCATAAAAAAAAGGT
GCAACATTACTTATATAAAAGAGTACCATGCATGTTGTCACTTCGACCTCATACAACAAA
AGCATCATCAACATTGATATCTAGTAATGGGCTCGTGCAACAGGCAAGTGAAGAAAAGAG
TCTAGTGAATTTGATACTCCTAAAAATTTACAACTATATTTACGGCTCAACTCCGGAATA
CATAAGTTGTATATTCAACCACATTTAAATATATAGGCAGATCTAAAAAAAACTAATCTA
CAAAGAAAACATGATATATTTGTGAAACTACATGCATACTTTGCTCATATGGTCTGCAGT
TGGATCCCAATTGTTGAAGTCGCCAACTAATGCTGCAGACTGCAATTCGAAGCAGTAATT
ATTCAAGAGTAGTTGAAAGATAAAACTAGTATACTTAGGTAAACAATCAGACAGTCAGAA
GAACATACATCTGCTCCAGGAGCCCATTCTCGGTAAGTGATACCTTCAGCGCTGCATGGG
AAGAGGAATATAGATAAGATACAAAGAAAAGGTAGAGACATACTTATCTAGTCAGGAAAT
TTCACCTGCGAACAAATCCAAACTTCTCGTAGCCGCGGGAAAATACATCCATGCCTCCAT
CGTATTCATCAATGTCTGAACGTATTCTCCTATATAGGCTGTATCTGTTTTTGATCCATT
AAGGCATAGTGAGACTGCTAGTACAGTTTGATCTGGGCATATCGGTTCATCCTTACAAAA
GCAACACAGGGGAAATGAATGTTCAATTGGCATAGATATTCAAAACACATAGAACCCATC
AAGAAATACATTAATTAGTGTACCCAATTACAGTGGGTGGCTATGGGTATTTTACATTGC
AGTTCTTACCAAACTGTCCTATTTTTGTTCGGTTACCACCTCAGTAAATGCTAAATTCAT
GTTACCTCAGAACAATGAACACACAAGAGTGACTATGAACTTCAAGAGTTTCGTGACACA
TCAATCAGCCATTCACATCTTATCAAAGACTGTAAATTGTTTTCAAAGTGCACACAAAAG
AAGCGAAGCATACCGATACTCAAGATGGTACTTAAAGTCTCGGAGCATTGGGTCAATGTC
GTATATTTGCTGTCCATTTCCGGGTTGTGGCACAATGCGTATTTTCTTCACCGTGGATGA
TTCTTTGTCCATTCTGCTCACGCCTTCAGCATCAATTTCTTCAGTAACCTGATATGTCTC
TGAAGACCGAATAGTATCTTCACCTCCATCGTGCAGGCTTGGTTCATCGTCGATGAATGG
AACCTAGCAAGACATGCAAGACAAAAAGTTCAGAACCGTGGCACAAATAGTTGCAAACCA
ACCTAGTGTGTAGGCCTCGCATGTGGGGTGTTGTTTCAGATTTCAATTGTCATGCAGGCA
GGTACCAAGAAGATAATAATCCCCATTCCCCAACAAATTAGAAAGAGGATGTAGTGCAAC
CTACGTGTGAAATAAGCAAAAATTTAGTAGAATGGTATATAATTTTGCCGGATAGCAGAC
TTTGAATTCCAGTTCTGGAAATATTTCAGCCAGTACTGAAATCCAGTGAAATTTCTTCTT
TGAGGGGAAAATTCAGTGAAATTCAGTGATTTCGGTTCACATTTCGGCCAAAGGACCACA
ACGCTCACTTGAAATTCAACCAATTAGTTGAATTTTTAGATTTATTTTAAATTAATTTGA
ATTCTTGTATACGACTTTTGGGTTTCATCTCCATAAGAGTGGCTGAGTTTGACGTTGGCT
CGCCAAGCCTATCACAACCCTGCTCCTTTACCCGGGTTTGGGATCAGCTATGTTGAGACA
ACATAGGCGGAGAGCCATACAATGAAGCTATGGGAGAGAGTCATTGAGCACCGCTTAAAA
AGAATGACAAGTATGACCAAAAATCAGTTTCGTTTCATGCCTGGGAGGTCGACCATGGAA
CCATTTTCTTGGTACGACAACTTATGTAGAGATATGGGGAGCAAAAAAAGGACTTGCATA
TGGTGTTCATTGACTTGAAGAAGGCCTATGATAAGATATCGCGAAATGTTATGTGGTGAG
TCTTGGAGAAATACGAAGTCCCATCAAAATACGTTACCCACATCAAGGACATGTACGATA
ATGTTG
