Contig Data
morexGenes
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Map Locations of contig_160327 (6413 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_160327

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22169 4 955 bp MLOC_22169.1 Available Available LOC_Os04g59000.1, FRAME:+2, EVALUE:5e-11, 13104.m06215 protein protein kinase family protein, putative, expressed





CDS Structure of MLOC_22169






Contig Sequence (6413 bp)

>contig_160327 6413 assembly3_WGSMorex_rbca.fasta
TCCGATCTCTCCTCTCGTAGATGGTGATCATCATGGATAGATCTTGTATGTGCGCAGGAA
TTTTTTTGTTTCCCATGCAAGGTTCCCCAACAGGGAGAAATAAAGAAGGATCACAATCCA
CAAGTTGGAGATCATTGGATTTGTTTGATTCATCATGGAAACATATGTGTTATTCTATTT
TATGACATTTTACCTAGGAGATATGACTAGGTCCTATGAGAGAGGAGTTTTTCTGGTTTA
TATGAACTTGGCATTATCGATTAGGATGATAATGATTATGTCGTTTTTCTGTCTTATGAA
ATTTTAACTTGGTATGATTAATATGATGATGAGCAGTTAGACGATCAAGAGGATGATGAG
TTCTTAGATGATTAAAGTGGATGGATGCATGTGACCAAGTTGAATTAGAGGAAAATATGA
TGTCGCAATTCACAACAACATATTTTCCCTCTAACCCAACTTGGTCGCTTGCACCCATCC
ACTTTAATCTAAATGTTGTTTTTTGCACAATTATTTTTGTTGTTGTATATTAATATGTAT
AACTGTGTATAAATACAATATTTATATAAACAAAGAAATTTGCGCAGTTAGTAGTGTCAC
GGGTCAAAAATATGCGTTGCTGCTAACATAGTTACCAGTAGCGTTGGGCCACCGGCACTA
CTGCTAAAAGTTAGGTGTAGCGATGGGCAACCGACACTACTGGTAAAAGTTAGCTGTACT
GCCATAGTAGTAGTGCAGCTGCCCACGTTACTAATAGGCTTCTGACCTGCGCTACTGGTA
GGATTTTCCCTAGTAGTGGTTCTAGTCCCATATCTTTCTCCCATCGGAGCTGCTAGAATC
CAATGATGCTTCTTCGTCCTCCTCAGTCCCACAGCCCAGCCTCAAGTCGGTGGTGGTGTA
GGACAAAGTTGTGGCATCCGGAGGACATGACTCATCGGCTGCTGCAGGCCATGAAGGTTG
GATTGAGGTGCATGGGCATCGGGGAAGCTTGGATGCTACCAATATGAGGGATGTTACGCC
TCCTACGTCTCTGGTGGCCACCTAGGCTGAGCGCGTCGTCTACTTCAGTGGATGGATGGA
AGGTGCTTTCGTTGCCTCAGTCGCAAGCACTTCGTCGCTACATGTACGGAGCCACTCAAG
TGTTGGTGCTGCAACAAGAACTTCCACCTTGCCAGCCAGTGCTCTAGTCCATCTCAAAAG
CCCCCCTCGTTGGCACCTTCCTCGGGGCCTCGCCGTGGTGTTGATGTTGTCCGTGGCGTG
CTGGTAGCCTACCCTTCATGGCCTCGTTCCTATGTTGATGCTCTCTTGGCTTCGCCCATT
GGATATTGCTCCTCATGTCTCACGGATGGTTGTGCCCTCCCTCGAGCTCCCGTTGGGCAA
GATCTTCTTGATGCAATGTCGTTGGCTGGGTTGTTGGACATTGTTTTACAACAGGATGAT
CCTATGCTTGATGAGTCTATGGTGCCACCTTCTCAGGTATCACCCGTTGGTCTTGTGGTC
TTCTCTGACTACTCTGATGAGGTCTCTGATTGGTGTGATGAGGGGTGTTTGGATCATGTT
GTTTTGATGGTGGTTGGTGAGGACTTCGACCCAATGTACTTGGAGGATATGATCTCGATG
CCTCGCACCGGGGGCTACTCCTCGCCTATTGATGTGCAATTTCTTGCACATCCGACTCAA
AGATATGCTTTGGGCGATGATATGTGATTGGCACATGGTGTCTCGTCGGTAGGGAGTGAG
GGATGTGTTAATCCTATGTGCTCGGAGGCTACTCTGGTCTCCATGCCCTCGAGGCCCCTC
CTCGTATGCTATGGTGCATTCCCTTGTACGTATGAGGTTGAGTTCAGAGGAGCCACTTGG
TATGAACACGCCCAATGTTCTCGCTGAGCCTGTGACGGAGGTGTGCAATGTTGTTGCGAT
GGCGACAAAAACTAAAGCAACACCAATATCTCTAGAGGATTTTCTCAACAAGGTTACTTG
TCCACTCCCACAACTTCTGCTTGGGACCCCTGTGCCTTCGAATGGGGATAAGAATGACAG
GTGGCAGAGCGGGCGTCTGGAGAACAAGAACAAGGCATGCAACATCTCGACATCCAAGCA
TGTAGAGTATAATATGTTGGAGTTTTTCGGTGAGCTTCCGTAGGTCAGCAAAGTAGAGGG
TCCACGGCAAAATATGCAAGCATATCTAGACCTGTACAAAAAAAACACTCTCACCACAAG
TGATAGAGGCGTTGAGCTCTTTGGCGAGGATTGTGGGGAAGTCAAAGTTGGACCTCTCGA
GATGCTTTCCACAAGATAATGTTAGAACATTATTCTTTGAGGCCAAGTCGGAAGAGTCAT
TCGGTATGGATGGTTTCCCTTGGGCAAGTGGCTATCACTTTGGTTGCACTTAAGTCTCGC
CTTACTGTTTTGGGCCTTGGCGCTCTCGTGTCTGGCTTCGATGATGTCCCTTGATGATGT
TTTTGTCTTGTACCTGTCCCCTAGTTCTAGTGCCTCTTTTTCTTGTTTTCTTTTTTACAA
GTTTTTATTCGTTTTTTCCTAATTAGCCGACAATGTTAGATTTTCAGGTCTAGTTTTTCT
TATAAACTGGACCAACTCTCTTCTTATTAATGAAATGCAGGAACCCCTACCCCGCTCAAG
GTGTTCTAGAGAAAAAAGGAGCAATACCCGGATGGCCTTGTTGGCGACAAAGTCATTAGG
CGGTGGTGATGAGGATAGGTGGCAGGCTTGCGTATCCAAACTCACTCCATGCTATCGTAG
GTGCATAGGTAGTATCTGGAATGGCTGGGGTGGAAATAGTCGGACACATCCTTGGGGTTG
TTGCCGCGGTAACGCACGACACCAATACTGCAGGTAGAGAAGCAGTGAGTTCCCATAGTT
GACACATGTCGATAAAATGAGTATTGTTGTCACCACCAGCGAGCCATTGGTGATTGTAGT
TCATAGATGAGAGAAATCCAGCTTAATAGTTGGCAACAATGAGTTCCCATCCTTGCCTAC
ATGTTTGCCATTTGGTGATAAAATGAGTATTGTTGTCACCGCCAGCCAGCCATTGGATTG
TAGACTGCTGCTTCCACATTGTCTCCTCCATGTCATACAACTCAACTAAATATGTGTTTA
CTTTTAGTTCGAGATGATCCAGACCAACACGATCAGGGTAGCAACAAAGACATTCAAGTT
ATTTTTAACTCCTTTATTTGTTTCTTGACATTGCCAGAAGAGTTTATCTCCCAACTTCCA
AGTGCACCCGCTAGACCAGTAAGATTTCCTTTGACTTTCAAAAATAGAGCTAGCTGCACT
TTTCCTTTTCTAAGCATCAATGGCAACCTTTGCTAGTTCTGGGTATGCCCCCCACATAGC
CTCATAGCCAGTGGCGGACCCAGGAATGGGCCACGCCGAGGCAACATTCCTTAATTGTAG
CGGCTACTGTAGCAACCGTGCTACAGTAAATGAAGAAGATGGGCCTCACGCCCCAGGCTG
CCGCACCTTTTGCGTGGGGCCTAAATCCGCCCATGCTCATAGCGGATGGGGCGTGGGGTG
AAAGGTTCGCGTCGGTGTCGTAGAAACACACACCTAGATCAATGGGTGAGCTGAACTCGT
ATAGGTGGGTGAATGTAGCCCTTGGGTACAATAGATCCCATGAAGGAGTGACAAGGGCCC
TATCAAGCCAAACACGTATAGGTTCCTCCCACAACCTTCTTCTCACACTTTCATCAATTT
CCTTTGTAGCTCAGGTCACAAAAATCACAAATATGTACCATGTCCTCAAAATCATCAGTT
TATGCCTAACTCCTATTGCCAACACCATCATGCTCACTAAGGTTCAATACTTCATTAAAA
TCACCGAGTGCAATCAGGGCAAATTACTAGTAGCAATAAGACCCTTGGAGCATCTCCAAC
ATATGCGCTAAATAAGCCCGAGCGCTGGATAAAATGGCTATATAGCGCGTGAGAGATAGC
ATTCCAGCAGTCACGCTATAATCTCGCGTGCGGTAAACAAGCACCAGGGCGTTGGATATC
TTGTGCGCCAGCTCCAGCATGCTCGGAAAAAACTGCATCGCGTGCTGGGTATTTTGTGCG
CCAGCTCCATCGCTAAATTCGTGAAAAAGAAACCACCCTCCTGCGCGCGCTAAACGCTAT
TTTGGCATTGCAAAAAGAATTTAACGCGTCTTGCTGCCACGCGTCTTTTAGAGATGCTCT
TAATGATATCCCTGTTTTGTACCTGAAAGTTTTGCCATCAATGAGAGTCACGCGTCAAAT
TGTTGACAAATAACCATCAATCTTGGCATCTAATGTGATACTAGGAATAACTTAACACAC
TTTCAAGATTTATTGAATCGCTCAAAATATGGGGCTAATGCTTCGATCCGAGCTTTACTA
ATTTGTGTCTCAACTATGCCTAGCACGGACGGGGTACACATCTTCGCGAAACCGCGAAGC
TCTCAAACTGTCACGTTGTTACCCGCTTGATGGCAGTTCAACTCATGAGATTTATTGGGA
GCGGTGCGATCCATCCTTCTGAGAAGAACTTGTAGTTTTTTACCTCTTCTCAGGTCTTGT
TTTCAAGATGGGCATGGGTTGCCATCAACTGTCGCATGTCCATGTATAGCAGAAGTAGAG
GCACCATCCAATGCTACCAGCAAAGATCCCCAAACAGGGGGTACCACCATGATCATGAGG
AGGCTTCTTCCTCGTAGGATCAACTTGGTCCCAAACTGGTGAGTTAATTGCTGAAAACAT
CATCATTGAAGACTAGGGTTGCAGAAACCACAGTTTTATAGGTTTGTGTCAAAAACCATT
AATTTTGAGCCTATTTTTTGCAAATAACATTAGTTGTTGGTTTGGGGCGTTTTAATAACA
ATTATGACAGGTGGGTCCCGCTTTCGTCGACGTGGCGTAACAGTTCACAGGTGACGTCGT
TAGACCGGGGACTTTGCACCGGCACCCTGCTTCAAAATATAAAAAGGCAATTAGCCCATC
CTCATGTTTCTTCTCTCCGGCCTGCAGCAGCATTTGCCATGGTCATGGCCTATCCTTGAT
GTCCTTAGACGCTCCCGTGCGCCCGGCCTGCTGCTGCTCACGCCTGTCGCGGTCGTTGGA
GCAGCGCTTGTCGCGGACGACGGAGGACCGGCAGCAACAACTTTTGCTGGCACGAGGTTG
CCGCGGGAGCCGGACACCGGAGCAACTGCTGTTTTCGCCGGTGCCGGTGCAAGGCGGGGG
GAACGTAGGGGACAATGTGGGACGACGGCCGCACTCTTTGGTGCACGTCCGTGCGAGCAG
GAGCCGTACTAATCCACACCCGTTAAGAACTAAGGAGTATGTTTGATGGGGTAAACGAAA
CTACTTTTTCACGCAAACCGGCAGCTTTATATAGCTCTGTTTGCTGTATTTATGTCTGTT
AATATACTTAGCAGATTTATTGCCAAGATTTATATATTGTTGGAGTTCTCAAATAATCTG
TTTGGTTTTCTTGTTCTTTACATTCGTCCATACAGCGAAGTAAATTATCTTTTGTAGTTT
AAGAAATTGAGAAGCATGCTTGAAAAAGTAATCACAGCAGAACTTTGTTTACAGTTATGC
CATGAAGATGAGTTAGAATATCTACATCACAAATGCAATAATTCAAGTTTCCTCTGGGAA
AGCTTTTCTGATATCTCTGTAGAGCTCATTAATCAGAGCAATACAAACTGACTATCAGCT
GGCATAAATGACTGAAATATCTGTTTTTAATCAAACATTCGCTTTTGACAATTCTTACAG
AACTATGCCACGCATGAACGCTGGTGAACAAGGCGGAGGACGTGTTGCTCCACCGCCGGA
TCCTCGCCGAGTGCGCCGACCCCGACAACCGCCCCGTCTTCCATGCCCGATTCCTAAGGG
TAAATTTATCCATCCATTAAACTCATGAAATCTTCCCTGCACACTGTCGCTTACTGTGTT
ATTATGGTCCTCTGCTTTCATGCGCAGTACCTTCAGCAGGACAAACCTCTGGCTCCAAAT
CAAAACGGTAATTGTGGGGGATCCCTGGCTTCCATGCTCACGTCGAGGTCGATGTAGTAG
CTACATCCCCGGTGCGCGCGGACACAGACAGACAGACAGAGAGAGAGGCGTTGGTGAGGT
GAAAACGCGGGCGTGGACGGGGGGTGAGCGGAAAGCACGGACCTTGGCGGGAGGCGTTAG
TAGTGGTCTTCGAGCACGCGGTCGAAGAAGGGGTCGGCGAACGCCTCCTGGTTGCCGATG
GCCCGCAGGCGGTCGTAGATCTCCCTCCTGACGCCGGACAGCTGCACCCCGCCGCCGCCG
CTGCCTTGGCCGGAGGCGGTGGCGGCGGGGGCCGGCCCGCAGCTCCCGCCCGCCCCCCCG
CCTAACCTCGGATAGCACACCTTCTACGACACTATATGCGCCAAAAGCAATAT