Contig Data
morexGenes
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Map Locations of contig_160308 (7728 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_160308

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22150 4 3246 bp MLOC_22150.1 Available Available None





CDS Structure of MLOC_22150






Contig Sequence (7728 bp)

>contig_160308 7728 assembly3_WGSMorex_rbca.fasta
TCCATCCAGCTCCTCGTCGCCCCGAACGCCGTGATAGGGGCCACCCTGGCCAGGCTCCTG
GTCGCCAACCCGCACGCGGACTCTGGGTGCGAGTACATGAACTGGTGCCGCCTCCACCTC
GTCTCGTCCCGCTGGATCCAGCCGCCGTCGCCTTCAGCCGGCATCCGCCTCCAGCCGCCA
GATCCCGCCGGATCCTGCTGTCCACGTGCCGGATCCCGCTCACGACTCGGGCCGCATTGC
CCACGGCCGCCACCTCTGGCCGGATCTCCTCCGCTCCCGATTCGCTGCTGGTGCTCGTCA
GCTCCCGTCTCGTCTGCGCTGGTTTTGGTGCTCGTCTCGTCAGCTCTCGTCCGCGCTGGT
GTTGGTGCTCCTCTCGTCCGCACTGGTCCCGCTGCTGGTGCTCGTCAGGCCCTCGTCCGT
TGCTGGTGCTCGTCAGGAACAGATCACGTGCTGAAGCAAGAACGTCATCTGTTTCCACAC
TACTCCAGAGCGATCTCACCTGAACCATAAATACATACATCATCCTTTATATCACTAAGC
TCCCTGGGGTTGGAGCTCCCAGGATCGATTGAGTCTAGGGATTTTCGTTCATGTGCATGA
TTTTGACCGGATCGTGGGCGACTGCTGGGCCCATTTGGTCAGAGGCTGGACGGTGTGGGC
TGGGGGTATTGGTGTGGGGAGAGGAAGGGTAATGTGTGGGGGCTCAGTTGCGAGTGACTA
AACTGTTTTCACCGCATCGGCCCACATACATGCCTGACACCCGAGGCTCTCATTAGTCAT
TAGCAGCGCGGTGGTTTTATATCGGTCTCACGTGTCTTTGATCACTAGGTGAAGAGGAGG
AAATTGGGGTGGGGGCGCTGCTTCTGTCTCCTGTGTCGTTTACCACTAGGTGAAAAGAAG
AAAATTGGGGTGGGTGCTGCTGCTTCCGTCTCCTGCGCTGCTTGGTGTGTCTCGACGGTG
CTTCGGTGGAGCGGTGGCGTGAGTGCGTTTGTTGGTTGTCGGCAGTCTACGCGTTGTCAG
GCTGGCCGGCTGCAGCCTTTCTTCATTCTGGAGGCTGCTTCTGGTGCAACCTACTCTTTG
TCTGCTTTGTTCCTCGCATGTCTTCCGCTGTTATCAGAAGCACAACAGGTGAACAAGCGG
CAATATGCGTCCTCCTCTCTACTCCTCTACAATTCGTTGCTTCTTCCCCCGATGATTTCC
TGCTGCACCAATCTGCTCATTGAGCTATTTGCCCTCTTTTTCCTTCTATATGGTTTTGGT
TATTTTCTGATTCCCTAGCTCGGTTAACTGGTAAATTGTGGAGTGGCGATCCACAGACAT
GAATTGAGGTGGTTCTTGGTGCAGCAATTGGGCAACGTTGTATATTCTTTCTGATTTTTA
TGGTTTCTGCACTTCGTATGGCATGATGGTCCATATATCTTCTTCCTGGTTCAGTTTTTG
ATTTGATCTGGAAGGATTTCATTGGGTTCCTTGATCCCTTTCTGCAGGTTATGTGGACTC
CATCCGAAGTGGGAATTTGATTGCACTTTCATTTCTGGCATAGCTGGTACAAATTTCTCC
CTTTTGGTCGGTACTTCATTACTGCTGTCAGAGTTTAGAATTGCATTGCGTAGCTAAATA
CTTCTTGCATGTTTGAAAATAATCCGAATTCCCCACACAATTATACATCAAACTAGACCA
AAATATTTCCATGTAATATTGTTTTACAATAGTAGTGTCATGCGGATTTTCTGCTATGCA
AATCTGATGCCTATGATGGAGTATATATCTCCACAGGGACCAATCATACCTGGTGTATTT
CTGTCCTTTCTCTACATAGGATTCTTAGAGAGAGAAAATTCTATGAGACCGGGTATTTTT
TCTTATCAAGTTAGACCCATCTAAACAAATGGCATGTGTACAATATGAATCTTGGAGCAA
ACTCTGGGTCTTCGTCCCTGCTACAGTTATCAAATACAATCTCATCAATAGCGCCAGTGT
GCTAGTCGGCGAGCAAACCATGACGATGCGGTCGAATAAATCTCTGTCCCCACATAGTTT
CATGCCAAGGTGCACCCCGTTGCTGTTGGTCCTGGCCACGGTCACCAAACTGCCGGTGAT
GGCTGACATGAGCCGACAATCAGGCATAGCTGCTTTCTCTGGATACAAAAGGAGCTGTCA
GTCTTGGCCAAAATGCTAATTCTCCCTTGAGCTAGAAATTAACCAAATCCAATCCTATCT
AATCTCTCACCATTATTCTGTGCCTTTCATCCTTCGAGCAACCTTTCCTCCTACAACTTG
CTCAATTCCTCACGGGTGGAGCTAGCTGTTTTACTGGCCTTGTAGCCTTGCAGCCTTGGG
CGATCATGTACTTCATGCTGATGTTGTGGTAGGGGTTAGCAGCGTCGGGACTCTCCGTCG
TCTGAAATTCGAGGCGACTGACATTGAATTGGACGGGTGTTAGAAGAAGATGCAGAGTTT
ACTCCAAGATTCGTATGGTACACGTGTCATTTGTTTAGATGGGTCTAACCTGATGAAAAA
AGGACCTGGTCTCATAGATTTTTTCCCGATTCTTAGGGAGGTTCATTTAAACATCCGAAT
AGTAGCCGAGGTCAAGGTTCTTGCCAAGTCAAATAAGTTTGTTGATAGCAAGAATAGTAA
GTTGACAATCTGTGATGTTTCTGGACATCTGCAGTGTTTTCTTAGAGGATCTCTCTTGAA
GTTTTATTCACAGTACAGGCACTATTTGAAGTTTTGAACATCATATAGGCAATTTTACGG
TGTGATGATACTAGGTTTATGAACCTAGCGAGCTCAGATGTACATCAGAGCTGAAGAGAA
TGACGGAAGATTACGCCGATTTTATTCAGACTCACTGTCCCTTGCATTGATTGGCCTACA
GAGACCCTTGGTAAAAATGGTTTACCATTGAAAATCCCTTCACTTACTAAACTCCCTTAC
AGCCTGGATTTTGTGAGCTCTCGGGTTGTTTTCATGAGCATAGAGAACATTGAAATTCTT
GGAACTTGAATAGTTTGGCAAAATGCGGCAAGATTGCTGATCTCCACATTGCACAAGCAC
GGCAACCAAACATTACATTGCGATTCTTTCATTGAACATCACACATGCATACACTAGATA
CTTGCACTGCATATGCATCGCTTCCTCTAGCTCATAATCATCCTAGCTCCACCATTATCA
CTCTAGATTCAGCTCTTGCACTCACCTCTCTTCTTTTGAAGACATATGCTCTATCTTCTT
CTTGGTGCTGACATTGGCAGGGAGGGTGCACCAGGACGCGCTGAGAGGTTGCGCCAGAGG
TCATTAATCAAGCAATAAGGAACTTAGGACATTTCTAACGGATGCTCCAAAAATAGTGAA
GTATCCAGTGGAGTAAAAGCTTAGGGCATGTACAATGGTTGATAAGATGGTCTTATCTCA
AGTCTTGCATGTAATTTAGAGATGACAAAAAAATTGTTTTACAAAGGGTCACTTCTTAGC
CTTATCTTCAATAACTAGCTGTTCATAAAAACATGGTGAGACATATTGTGTTAAGAGATC
ACCTCTTATTCTCTCTTAAATAAAAGAAGACAAACCTTTTCTTATGAGTTCTCTCTCCTC
CACCTCATCATTTATCCTACATGGCACTCTTAAGATAGCACCATTGTACATGCCCTTAGT
AGAGTATATTTACTCCATTAAGTTTTGACCGGACCTAACTGATCCCCTATATTTAGCGGA
GTATATTTTTCATTTTTTCTAAGTCTTGCAATTCTAGTATAAATTGCAACTACATATTAG
CAGACATACAGAAACTAAACATAAATTTGAATGTTCAACCAAATCACGAGTACAGTTTAT
AAATTGAATTTTTTAAATTTAAACATGCTGAATGGTCCAAATATAGCAACTAGCATGTGA
TAGAACAACTAGGATTCGCTAAGATAACAAGATCTTGTTGGAGCTGAGCATAAACTTGAC
GGTTTTCGACCTTGCGGTGCTCCTCAAGGAATGCCAGGACCCCTGTTCATATCATACACT
AGCTCAACCGGAGTTTTGTTGGTGATGTACCGAAAGTTCTCATGCATATCCTTCATGTCT
TCAATGATCATGCTATGCAACATCATGAAGCAACTAATGATCCGCCATAGAACCTTGGAC
TTTCACTACTCAACAGGGCCACATGGTCACGAACAATTGCAAAGCGCTTCTGAAGCACAC
TGAAGGCTCTCTCAACATCTTTTTTAGCAGCTTCTTAACATTGGGCAAACTGAATGTTTT
TGTTACCTTTTGGACGTGGAATTGTTTTGATCAAGGTAGTCCATTGTGGATAGATGCCAT
CCGTAAGCTAGTAACCCATCGAATAGTTGTGCCCGTTGACCGAGTAGTTGCAAGGAGGAG
GTTCACCTGTAATAAGCCTAGAAAACAGTGGTGATCTCGACGGCACATTCAAGTCATTGT
GTGAGCCAGGCAAACCAAAGAATGAATGTCATATCCAAAGATCCTTCGATGCAACTACCT
CAACACTGATCGTTGGATGGTTGATTTGACCTTTGTACCGACCCTTCCATCCCCCGGGAC
AATTCTTCCATCTCTAGTGCATATACTTAAGTGATCCAACCATCTCTGACCATCCTCTTG
CTTCACTCTCAGTCACCAGCCTCTGGGTGTCTTTCTCGGTTGGTGCTCTCAAGTACCCCG
GGCCAAAGACAACGATCACTGCTTTAGTGAACCTGCGAACCGCCTCCAAGATTGTGTCTT
CACCAATACGGACGTAGTCATCAATTGCATCGACCGAACACCCATATGCCAAGACTCGAA
CAACCGCAATATACTTCATGAGAGGGCTTGCACTATCTCTGCACATGCATTTCCTTGGAG
CTTGAACCAGTCATCATATCTCTCAACGGCTTTTGCAATGGTCAAAAAAAAAAAACTTGT
GCTCATTCGAAAGCGCCGACAAAAGTAGGATAATTTGGATTTGGGTCAAAGTAGTCTCTT
ATGATCTTGGCATGACCCTTCGCTCTATAACGGTTGATGTGTATGCGATCAAACTGTAAT
CCTCTCCTCAGCCGCCGAACATCATCGTTGAAAATCATGCCTAAAACGGTTTCAAAGTCA
TCGTCGTCTTCTTCCTCTTCGGACGACGACGAGTCCTCCAAGGCCATCTCCCTCAACCTC
TTCATCTACAATGTAAACCGGCTAGGTTCAATCCAAATGGCTCGGTTCACAAAGAAACGA
ACAAAAAACTCATCTAGGTCATTCGTCGAACACTAGCGATGTGGTGGAGGTGCATTGGTC
TGCCGGTGACGTTGAGATCAAACAGGTCGGCGGCGGCGAGAGAGAGAGAGAGTGACCTGC
AGCGATGTGCAAGCAAGGTGAGATACGCCAGCCGACGAAAAAAAAGAAGAAGCACCGACA
AGTTTGCGCAAAGGGACTAACTCCATCATCGCTTTTATCACATGGTCCCTCTGAAAGCAC
GACAACGCCTCGGTCTTGAACAACCTCTGGCCTTCGAACATTGACCCGGTGCGCGCTCTT
GTGGGCACCAGGGCCGGCCCTGAGGGAGGGGGGCAAGGGGGCAGCCGCCCCAGGCCCCCA
AGCTGGAGGGCCCTCAAGTATGTTCTTTGCATTAGGTCTAATGATGTTTTGTTTGAACGA
GGCCTAATGATGTATGGTTGTAATAAAAAATTAAAGGTTAGTAGGCCTGGCCCAAACGCA
TAAGTATTAGCGCAACTACCAGAGATGGAGATCCTTAAAAAGATTACCGTAGATGGACCT
TTTTTTGCGTCGTCGTAGATGGACCCTAAAAGAACTAATTAGAATGTGTGATACATCTCC
GTCATTCACGCACGGAACCACCGGATCTACAAACACACGCATGCATCGCAATCACGCATG
CAACAGGCGCTGCCTTCTCGCCTCACTCCAATATTGTGGCAGATAAACGGAGTGCTTGCT
AAAGCAGGACGACCAGATCTCAAGGGACGCCGTGAGTGCCGGATATCTGTGGCAGGCCGT
GTTGTGTTGTGTCTATAAAGGTGAGTACTGCCAGCCGATCAACAAGTTTCACTGTTTGTA
TCGTTAATCATTCTTGATCTACTCAACATAAAAAAATCGTTCTCGTTCTACGTTTTAACA
CTGATGTTCATGTGGGGGGGTCGATACCAAAGAGATTAGGCAAAAAACAAGGTTCCGGAT
GCTGGTCATGGCGGTTAGTTTCTAGATAAACTAAGCAATAATTGCACAACTGGATAATTA
ACTCTTGATTTAGCCATTTGCGCAACTAGATGGGGGTACTTTTTCACTATTGCAGCACCA
TAGATTAGTTCTTTAAGATACAAAGATATTAAATTTTGATACAGTCTTTTGTCCTTTTTG
ATACCTAAAATAGTGTGCTCCTACTGTTATAGTTCAAGCATCACATTAAACATGACTTTG
CATCACACGTTTGTTGTCCACTTTCTTCCTATTATTTCAATGTTTATATGTGAAGGGGCC
CCGGTTTTATTTTGGCCCTGGGCCCTCAAAATCTCAGGACCGGCCCTGATGGGCACCGGC
AGGAGTGAGAAAATTAGAGTGAGAGGATTAGAAGTAGTTATCCCTGTAACCTAAATCTAG
TGTAAGAAGGCCAATCAACCTCCTCTGTGCTCACCCCACACCCTAGATAATGTCGTCTTG
CGTCCGCCGCCTAGGGCTGCACCATGTAACTCTTTTTTCACCCTAACAATGCAAAGATAC
GCAACAATGCGTATTCACAAAAAAGCAACAAAGCAATTCGACGGATCAACGATGGTCTTG
TCGGCGGCTTTTCACCTTGATTTTGATGACGACGACGGGGGCCGAAGGGGCTCGACGTCG
GGAAGAAGGGCGACGGGGGGCAACGGAGGCAACGAGATGGCGACAGGGCCGACAGGCGGT
CGCCAAATGTCGCGCCAGCAAATTTGTAAGGGCGGGGTCATTGTGAGGAAGAGGCGCGGC
TTTTACTCAAGCGCGGAGCGGTGGCGTATATTTAGGGCCGGAGTAACTTACGATGGATAA
AGGATCGGCTAGGCACCGGTTGAAGGAATAAAACAAAAAAGTTAGTTCCTTAGAGCATCT
ACAACCGGATCATGCAAATCCAGCCCTCAAACGCCCGTTGATGCCCCGGGCGCGTCCGCG
GACACCCACGGGTCACGCCTCAAATAATGCATTCTATACCTGGATATTTCAAATTTGAAA
CTTTAAATCCATACTATTACATGTGACGTAAACCTAAAAGCGGAGATCATCTGGATTCGC
CGTGCCCATGTCCGGCGGTTGGCTACGCCCCTCACAGTGTTGGTCCGGTCGCTGTCGAGG
TAGAGTAGGACATGGGACGCTAGCCGGCTCACGGGAGTCGAGCTTCTGCTGTCTCCCATG
CCGTACTCTTCCCCGTCGGAGACCGTAACCCGGATAGTGCAAGTCGACGTGAGTTCGATG
AGGGATCCTTTCTGGGAGGAGCCGACGTCCACCATGCAGCGGTTGCGTCGCCCGCACTGG
TGCACCCTATGGGATGCCGGAGAGTGTGACTCCGCCTCTCCAATATCCGTTGCCGCGAGG
GCCTCCGCCACATCCCGTGCCTGCTGCTTTGCCCGACGGGCATGCCGCGCCATGACATCG
TCCAAGGACGGCCATGCTTCGTGCTCGGCGCGTCAACGGAGGGGTTGCACTTTCGCCACG
ACGTTCGGACGCTAGACGGACCGCACCGCCTCCGGTGAGGCAGCAATG