| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_160302
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22145 |
4 |
2243 bp |
MLOC_22145.2 |
Available |
Available |
LOC_Os03g41460.1, FRAME:-2, EVALUE:0.0, 13103.m04461 protein CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_22145
Contig Sequence (4184 bp)
>contig_160302 4184 assembly3_WGSMorex_rbca.fasta
CGGAAATCAGATATTAATATGCACTATTACAAAATTGCTCAATGATGTTAGGATCCGTTG
TTGGCAAGTTATTCAGAAACTTGTTAGGCCTATTTTGGTTCATAAGAAAGAATCATAACA
ATATAAATATTTTTTCATTGAATGTTGACTCATGTTTATAGAACCAATCATATACTCCCT
CTGTTCCTAAATATTTGTTTTTGGAAAGAATTAATTAGTTTTCTTCAACAACAAATATTA
CGATACAGAGGGAATATAAAAATAGGATCCATTCCTATGAATCAAAGGGCTCTAAAAAAA
TTCTTACAAGAAACGAATTTCTATGTAAGGAGGCCTTACTCTATTATCGTGATTTCTAAA
AGAAACAAGGCCTTCCATGAAATATAATGCAGTTCAGGCTGTTCTCTTGTACAAATCTCA
ACACCTGGAACCACAAAGCAAACCCATGGATGCCCTGAACAATGCAAACCCATGGATACA
CTGAATCACATCAAGACCCACAACGCAAACACACAAAAACTCATCTGAACCAAAAGGTCC
AAGCGCACTCATGTCTCACAAGATGCTGGATCCTGGATATGGCAGGAACTTGATCAAACT
GGAGTGCCCTTTATTTGCCTACAACACATATACATGGTACAAACATGATGTGATAACATG
TCCCTTATCTAAGGGGAGCACAGACACGGTCAGTTCCCAAATTAGCGGAGATAGTCACAC
GGCATTAGAGCAAAGCATGGTTACATCCAAAAGGCAGGCTAAACCGTTTCAGAACATCGG
AAGTACAGGGACCAACAACAAAAACAACAACAAAGTAACATTTGTGGGCTATCAAGCATG
AGCAGCCGAACTTCAGCGGTAGCCTCAAGATATCTATCCCTTCCTCGAGTATCTTGGCCA
TCTTTCGGTCAACTTATATGTGAGAGCCTTTGCAGTGTCACATGGCATATACGATCTCCC
CGCTGCTTTCCACGTCGAGGTCGGCGTCCGAATCAAGGTCGTCCATGTCGTCGTCAAGGT
CGAGACCGTCGTTCAAGAACTGGTTGATCCGAGAACCAGCCGCCGGGATGGTGGCCTCCG
CCAGGATCTGCATGATCTCGTCCATGCTCTGCATCGGCTGTTCAGGCTCCTCGTACTGGC
TGCTCATGGTGCTATCATCCACCAGGTCAGCTGGGAGGTTCTTCAAGAACCACGGATGGT
TTCTTATCTCGGGGATTGTGATTCTCTGCAAAAAGTTTATCAATCTCAAAGTGAACTGTA
TGCCACAATATAGTGACTTGAACACTACATGGCTATTAGATATAAGTACTCACGGTAGCT
GGGTTGCCGACGAAAATCTTGGCAATAAGATCTCGACACTCGGAAGATATGTGCACGTAA
TCGGGAATCGAGTACTGCACGCTCAATATCCTCTGCCCGAACAAGCTCATTAGTTTTATG
ATCAGGACAGAGATGGTCAAGAACATGAAGATGGCTCAGAGTGGGAACCTGAATTGTCTT
CCTAAAATTCTTGGGCTCATCCGGGTCCTCAAAGGGATATGCACCAACTAGCATAACATA
AAGCGTCACTCCACACGACCACACATCCGCAATCTTCATTTCATCGAGGAACAAAGGATT
AGTGCTAGGTAACTTGAGACGATACATCGCAGAGTCTAGCAGTACCATGGGATTATACAT
CATGCATCTCACGAATGGAAATGCTTCGCATGCAAACATAGTTGCCCAAGTGGAGAAAAA
TACGCAGGAACATTAGACAGAACAACAGGATCAAGATATCATGAGAAGTAGTATTAGCAT
TGGAGCCCTAATTTGGCCGTGTGCATCCTAGCTATGCAGAGGCCGGGTGCGTGTGCTTCA
TTTCAAGTCATTAAAATCCACCCTTTGCCGTTAAAAAAATGCATACCTTTCCATCATATT
CCTTCTTGAGAAGAACCTCAGGAGCAATGTATGCGGGGGTTCCGACGGTTGATTTAGGCT
GCGAGTGAAGAACCGACGACTGCAAGTACGCAGACCAGCAATGAGCAGAGTAACAGGTCG
ATACACTAGGACACAAAACTATAATCACAAGCAGAGGATAACCCCCAATTTGGCATGTGA
ACAGAGCAAACATGTTGATTTCTGAAAACTGCAAGCCTGCGACAGTGAAGCAGGTAGCAT
CTTGTTTTAGTACGTATGTAGGAGGTACCTTGGAATATCCAAAGTCGCATATCTTGAGGC
GGGGAGCCGTGCTCCCGTCCAGCAGGGTGTTCTCCAGCTTCAGGTCACGATGGCATACTT
GCTTAACAAGAGACGAGACCAATTTAGCAGCTGCCGTAACTGTAACTGACTAACTGTGCA
ATCGCCCGAAGAGGAAAGCGTACCATGGAGTGGCAGTAGCTGACCCCTGAGAGCAGCTGC
TGGAAAAAGAAACGCGCCTGAAAAGTCAGAGGCTTGGGCGGTTAGTACTGGCTAGCACAG
TGATTCGGTGGCAGTTGAGCCCACGTACGCGGAAACGGCGAACCTCGTCCTCGCTGAACC
TGCCGGCGTTGCAGATGCGCTCGAAGAGCTCCCCGCCGGAGGCGTACTCCATGACGATGG
CGAGGTGCGTGGGCGTGAGGATGACCTCCTTGAAGCGGATGATGTTGGGGTGGCGCAGCG
ACCGGTGGTTGATGATCTCCCGCTGCACGTTCTCGTCAATCTGCAAACACGCGCTTGAGC
CCTGGCGTGCCGTTCCGCCCCGTACGTGCAGGGAGGTGGAGAAGTAGCTAGTAGGAGGAA
GCAAGTACCTTCTCCCCGCGCTCGATGTACTTGACGGCGACGAGCTGGCCGTCGGCGCGG
TTGCGCATGAGGCGCGCGACGCCGAAGTTGCCGGAGCCGATGTCCTTGACGAGCTCGTAC
CGGTCGCCGTCGTGCATTATGGGCATGTCCATCCCCGGCCCCACCGTCAGCGCCGCCCGG
TCCATCCCCCTTCCCCTTCCCTTCCCTTCCCCCACCGCCGCGAGGTCGGTCGATCGAGCG
AGCAAGCAAGCTCCCGCGCGCGCGCCTCCCGTGACCCCGCGATCCAAGAGAGAAAGAAGC
CTTGGCCTGCTGCCTTTAGTTTAATTAGCTGATGATGAGCTCCAGCTCCAGCTCCAGAGG
GGGGGAGGGTGGTGGAACGGATTGGGCGGAGGAGAAGCCCCGCCTCGTGATCTCTCCCTC
TCCCTCTCTCACTCACTATCGCCTCGCGCTTTTCGCCCCGCGCCCACGCCGTGCCGGCAG
ACTTTATTTCCTTAATAAAATCGCCCCTCTCTCTGTGGCTTCTTCTCCTCCGTGTCTCCG
TTTTACTTTAATGTTTCTCTCCCCGGTCTGCTTCGCTAGGCGCGCGAAGGATCCAGTCCG
GTGGGGAAGAGAAGACGGGGGGAGCGTGACGTGTCGCGTCCTCTGTCCTGGCCCAGCAGC
ACCGGGCCCCGCGCGTCGGGCTTGTCACGGGAGGCCGGCGCCGGTGGTGTGCGTGCACGT
AAGCAGCGCCGGTCAATGACGTGCAGACCCGGCGCGGTGAGGTACGGGTGGGGCCCGGGT
GTCGGCGTCTGTGGTAGGACGGTGGCGTAGGCGTAGGGTGGTGGCGGGGCTGGAAATATC
TGGAGGGGTGGCTGGAAGGCGTACCGCGTGGAGCGCACGGGTGACGCCTCAACTTCGGGT
CGGTGAGTTGAGCTGAGCCCGCCGCTCCGTGCGGATCGGATGGTGGTCGGGTGACCCGTT
GCGTGCGTGGACGGCTGCGATTGATTTGACGCTGTGGGCGTGCTCTCGTTTCGGCACCGG
CGGTCGTCGAGTTGATCGGCTGACTCGCGGTAGGCGGGGTAGCTGATGATTGAGATAAAT
ACACTCATGGTCATTGTATTTGGAACGAAAGCATGATACGATCACTGAACATTGGAATAC
GCTCGTTACGGTTATTGAATACGATGGGACGTGAATATATGATCACTGTAGCACGTATGC
GGTGCGTACNNGCCTAGTTTGACCTATTGTTGACCGCCACGTAGTGGTCTCTCATTCGGC
CAACGATTCATGAAGGGGTTTTTTTTAAAAGAACCAAAATCCCCAATCCCTCAAATCCCT
AACCCGCAGCGTCCCCCTCAAATCCCTAACCCTCCGTCGCTCTGCTCCGCCTCCGTCGCT
CTGCTCGGCCACCACCGTCGCTCTGGCGCTGTCCCCCGCAAGCT
