Contig Data
morexGenes
Links



Map Locations of contig_1602521 (4642 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1602521

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22105 4 1568 bp AK366814 Available Available None





CDS Structure of MLOC_22105






Contig Sequence (4642 bp)

>contig_1602521 4642 assembly3_WGSMorex_rbca.fasta
GGCCTCCTCCGTTGGTACGTTGTACCGGTCATAACAGCCACCCTTGTTGTATAGGAGGTC
AAAGTTTACCGATGAATTTTGGTTTGAGCTTATGCTTTAACAATGAAGTACCTTCCTTCT
ATTTTACAGGATGATCACCCCAAAATGACTGGATCATCTTTTTAGCTTGTTAATTTAGTT
CCAGGGGTTGCAAAGCCATGATATTTAGCTTGTTCACTCGATCGGTAGTTCAGTTCTATT
AATGCAAGTGATGAATCAAAATCACTAGATATGTCTTTGGGTTGTCCCAAGCAGCTCAAA
ATTCATGTATGGAGCAAATCACTAATCAGGCTTGATTTATTTAAAGTTGCTGAAACAGTA
ACACCAATATAATATTTATTTGCTGATTTCATGTAGGAAGTTTTGGATAACAAAGTCAAG
TGCGTAGAGGATGTCAATGGTGTCCTAACTCATCAGGAGGTAATGTTCAGAGAGATTACT
TATCACTACTTTCTCTTCGTGATCTTTATGCTCATTTACTGTTTTGGGTTGACATGCTGC
TTATTTTCTTCAGACTTTTCTTAAAGAAAGATTAAGTGGACTGGAGGAAACCAACAAAGC
ATTACAGGAGCAGGTAAGAATTACACCGTCTGTTTCCAACTGTTTGTTTTTCTTCATTGT
AGCTGGTTGAGAAAATGAATCCTTAGTGAAATACTAATATCGCAATATGTATCCTATGGG
CAAACATTAGTTGTTTTCTTCTAAAAGGAGATACACAACACATACTTTGGTTCTGCAGAG
TAGTTGTTTATACTTAGAAAAAACCTAAAAAGAACAGTCTAATAGTTCATATATTCATAT
GTTGGTATATGAATCTGTCAGATCTGGACCCTCAATTGTTCAATTTTCATATCTACCATG
TGCACATTTTCTTATATATTCTGATATTACTATTTAATAACAAAGCCTGGCAGGTGAAGG
TACTGGATGAAGCTTCAAAAAGTACTGTTGAGGAAAATCAGCAGTTGCTGGTAAGTGTGG
ATGAATTGGAATCAAGATTACAAACCCTTGAAGCAAAGATTGCACTAACTGAAGCCTCCA
TTACTAAAGAGGTAAGTTTCTCCAGAACACCGCTCTAGTGATTCTTATGTTTACACCCAT
TTGATTTCTACCAACCTACAACTGAATATTTAATCTCCAATGAAATTGCCTGGTCAGAAA
TATGTATTATTTATTACCTCTTCGTAATAAATTCTTAGCGTACATACTATTCTATAAAAC
TGAAAAAAATGATGATGCAGGTTCCTAAAAATGAGGTGATGAATCAAACAGATCTGGCCG
GTTCATTTCTCCATAAGCAGACTGCTGGTTTTATGACCGTGATCAGTAAAGTGAGTATTT
ATTTTGGTAAACTATGAGAATGTTTGTCCATTTCCGCAAGGATGTTACTGTACCCAAAAA
TTATCTATGTAGTTTGTTTACATGAATATCCATTCTGGGGGATTACAGTTCAATTGCCCA
CTTGTTGGGAATGTGATTTCCGTACGTGTTGATTCATAATTGCTTACACTCAATGTTTCC
TGTGTGCAGGGTAACGAACTTACTGCTGATAGAGGTCTGAACAGTTCGCTGGTGGTTACT
TCGGACAATATCTACAGTCATGTCAGCAATATTCCCGTCGGTGCCTATGCTAGTGATCAT
GCAGATGAAACTTCGGCACACTTTCCAGAAGCAACGAGCAGCAATGGTGCTGGCCAGAGC
CTCATGAACGCAAATGCACGCCAAGGATTTGATGAACCAAGAATGAGTGGTGAAATTGTG
CCTGTTCCGTTGGATGATATACTGATTCATGAAGATGACCCACAGCCAGCGGGATCAGAT
GTTGAGACAGCCGAGGAGGTTCCATTCACCGATGCCCCCATTGTTGGCGCCCCCTTCCGG
TTGATCTCGTTTGTCGCTAGGTATGTCAGCGGTGCAGACTTGGTGAACCAAAAGTAACTT
AACATCTGGCCATCAGGCAGCTCGAGATCTGTGTGCTGGAAAGAGGAGTCCCTTTTTTGT
TGCGCTGACATAGTTTTCAGTATGTTTTGGAATTTCTTCATAACATTAAGATGGTGGCGA
ATGTGTTGGGCTGGTGCATTGAGTTCTGCAGAGATATGGACGCTATGGTGATTCGAGGTG
GTGCTGCCGACATATTTTTCTTCCTCCTGTAATTTATCAGGAGCGTGAGAAGTTATTGTT
CCCAATTTATACAAGAAGGCCCTGTACTGTGGCCCTCATATACCAGTTTGACCATGTGAG
AAGCTGTACTGGCCAGATCTATATTCTGTTAACACCTGAAATGTTAGTATGCCTTGCATC
CTCTGAATTCTGAAATGTGGGTGATATGGCCACCTTGATATCATATTACTCCCTCAGTCC
CATGTCGTTCAAACGTATGTGTCAAGCGTCTAGATACATCTGTTTGAAGACATCTATTGC
TTTGGTGTGATCTTGTGCCATGTATTTTTTTTTTAAAAGAAGGATAGTCCGGCTTCTGCA
TTGAGCGATGCACACAACAATCAGGTGTGTATAGAGTCTCACAAAACAATTACATGGATC
AATTCAAAGCCGTCGATCTATGTCAATACATCTCCTAGTTTGATAATGTGCCCTCAATGC
ATCAACATGCACCATTTAATGCGATGACCTTGCCAAGCTGCCTCATGGCGAGCCGAGAGC
ATCAACCGGTCTAGTAGACCCTTGGTGTGTATCGCTTGCGCATGCATCATAATCTGCTGA
TGCCATCTGCCCTTGTCCCAACTTTAGAAGAAATCAACATATTGACTATTGGGCCAGACA
TCGCCATCACGCCCATCAACACATGTCCAACGTCGTGGTCCCGCTACACTAGGCCGCCAA
GAGCCATCGTCGCCTACAAGGTAAATGCCACACCACATCACCTCTGATCCAGCTCGTCGC
CAACGCCAACGCAATGATATCCACCAGCCAACTATCTCACAAGGCCGCTTTCAAGAAGGG
AATGATGACGAGGGTGTCGTCGCCGCCCACCACATTTAGAGTTTTCACACGAAAGACAAA
TGACATGGTGGAGGTAGAATCAGATCTGATGAATGTCTTCATGGAGAAAAGACGACATCC
ACGTGTCGGTGTTAAAATCGGTGGATCTCGGGTAAGGGGTCCCGAACTACGGATCTTGGA
TCAATGGGTAACAGGAGACAGGGGAAACGATATTTATCCAGGTTTGAGCCCTCTTGATGG
AGGTAATACCCTATGTCCTGCTTTATTTGTATTGATGATGATGCATCAAATACAGAGTTG
ATCTACCTCGAGATCGTATGATGTGGTATAAAACCCTAGGAGTCTTGATCTTAATCTGCC
CTATGAACTAAAAACTCTCTGGTTTATATAGATATCAGGGGTACCTAGGGTTACGCAATG
TCGGTTACGTCAGGGAGTAACCATGCCGATATGATCATCTTGACTTGGAGCATACATCAA
GGCTTCAGAAGATTCTGTTCTGGACACGACATCGTCTTGTCGTTCGACCCTTCAATCATA
ATCATAGGGTAGCCCATGAGTCCGGCCCGTGAAGATAGGTTAGCGGTCCGAGGACCCCTT
AGTCCCGGACNNNNNNNNNNGCCCCCGAACTGGCCTCCAATGCCGTAGTCTTGATTCCTA
GTTGCTTCTTGCATCCCATCCCCATTTATATTCGGTCGGTAATAGTTCGGCCACCGATGA
TTTCCATGTTTCCGAACAATATATGTTACTTAGCCTCGAAGACCAACCGTTCGAGTGTGA
ACAATGCTTTTGTCTGACTACTTTTTAGCGAAAGGTCGCGGCCGGTCATGACCACTGACA
AGTTATAAAAACTCGATCCGTGGTTCGAGGCAGTTCTTTCATTGGCATGTTCCATCAATA
TGGAGATTGTGCCCCGCTTTTAGGGGATACGATTTATGACTTGGGCTATCCCACACGTGC
ATAAATGCGTGATATATGGGACAGTGGCGAGGTCCACGACGCGGTAAAGGGGCTCTTGGT
ATTACAACGTCTTATAAACAGGAAACTTCCAATAAAGCCTCCACACACTTCTCAGATCTC
ACATCGCCATCGCCTTCCCTAATCCTTTGAGCTCGAAGCTCCCAAGCCCCATTCTCCCCC
AATCTCTTCAAACCTTTTCCCCAATTTGGCCATGACTGGCTCGGGTTCTAAAGGCAAGTG
GGAGGCCTCCTGCATCACCAACAACGACATCTTGGAGTTGAAGCACGCCGGCTATCTGTC
GGCGAACATTGTTCATCGCGCCCCGGAGAAGGGCCAAGTCATCCCCATGTCAAAAGAAGG
CGAGAGGGTGGTGTTCACCCCCCACTTCCTTCGGGGCCTCGGCTTCCCACTCCACCCCTT
TGTAAGGGGTTTGGCGTTTTACTACGGGTTGGATTTCCATCACCTCCCCCCGAACTCTAT
TATGCACATTTCGGCTTTTATCATCATGTGCAAGGCCTTTCTGCGGGTCCAACCCCAATT
TGCCTTGTGGTTGAAAGCTTTCAACGTCAAGCTGAAAGTAGTTAACGGCGAGCAGGCACA
CTGCGAGGGAGTGATGGTTAGCAAGCTCCCCCTGGTACAATGCCCAGACGGTTCTTTCAT
AGACTGTTGGAATTATGCCCTA