Contig Data
morexGenes
Links



Map Locations of contig_160244 (2829 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_160244

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22098 4 1799 bp MLOC_22098.3 Available Available LOC_Os01g29230.1, FRAME:+2, EVALUE:6e-20, 13101.m03041 protein expressed protein





CDS Structure of MLOC_22098






Contig Sequence (2829 bp)

>contig_160244 2829 assembly3_WGSMorex_rbca.fasta
TAGGAGTCCTTATTAGTCTACTAGTATTAGTCTAGGAGTCTTTATTAGTCTATGTTTACT
TTCCTTGCACCTCAAGTCATGTGTAACATATATATGCCCCTTGGGCCTTCAATATAGATA
AGTTGCTTTCCTAACATGTATTACTCAAAAGGGGGAAGGGTAGCACGCCACCGGCGGCTA
GGGTTTATACCCAAGTGCATATTACATGACCCAAAATGGAGGAGATCAGTGAGGCTTTAT
AGCCATTACGCGCTAAGGCGGAGTGAAAAGCAGAGGAGTGCACATGCTCTTGCCAGAAAG
TAAACAGTGACGGGACGCTGATCAGGATCCGTGGGATGACACATCAACGGCGCAGAGACG
ACTCCAGTGACGAACCGTTATGGGCGTTTGTGAGCCACTGGATGGCAGATTGACGGTGCA
GATGCGTATTGGCATGCTGGAACAGGGGAAGGTTATCTCTGTAGCCTGACAGTAATTATG
GAATGAAGTAGTTTAAATGCATGTTTCAAATGAATTTGTGTGTGAAATTTTTGTTTGAGT
TCTTTTGATATTAAGATTTAGGGGATCCGCTAGATGAAGAAAACTTTAATTCCCCTTGAA
AAATGGCTTTTCTTGGATACGGGATATGATTTGGGAATATAGAATAAGGGATCTGCAAGA
GATGCTCTAACCTTCCTATCTTTTGGTCGACTTATTTTGGTTCCATTTGAAACGAGGGAA
AAATGGATGATTTTTGTGGGATTGGAAGCTCATAGATTTCTGGATTTGATTGATGCTACA
ATTACCTCAAGGCATTTTGTTTATATAACCAGAACAGTATAATTGTACTAAAGGATGGTA
TGCCTGTCTTTTATAGGTTGCTCGACATCTGTGAAGGCATTTATGCTGCGCGGGCAGAGG
GCGAGTTAGAAGTGGAAGAAGTTTTATATTGGACATTGGTAAATGTTTACAGGTCACCGC
ACATGTTGCTTGAGTACACCAAGCCAGAGTAGGTTCCCGATTCTGCCAAAGGAGCGACTT
CACAAATACTAATCCCAGTATTTTACAAGAGGCTTAGCTGATAGATCTTTAATTGATCCA
TGAGGAGCCACGTCACTTGAGTCCCTTTGTATTTTTGGCTTTCAGTCTGCTTAGAACAAT
ACCATGTAAATAGACCTCGTAGTTGTTCTGGCTAAATACATTAGTACATTTTTTCTGATA
GCATGTACATATTGAAAATGATTCCTTGATGTATACGTAGAAGTTTGATAGTTGAAGTTA
TCCCAGTAACTAACCTGTAGTAAAAAGTTGTTGAAAAAGATGTAATTCATTCAATCAAGG
TCAGCCCAACCGGCAGAATGTGTTCAATTCCGGTTATCTTATGATCCTTACACTCAGGTA
TGACTAATTTTTTCTTGTCAAAATGCTTTGTTCTCTGCTGATACAACTTCATCTATTCTC
ACTAACTTGTCTTGCTCAGCGGTGGGCTAACTCGTCAGCTTCCTGCTCAACAATGGAGAT
ATGAGAAGTAGCAAATTTCAGGAGAGCTCTTTGGTTTCCTGGAGGATATCAGCAATCTCC
TATCGATCGAAACAGAGTCCCACAATTTGACAACATCCAGCACATCTCGTCAACCGGAAA
TCCCTTAGTTACGCTGAATAACAAAATGAGGGAGGGCCACCGCGAAGAGCCTGCAACAGT
GGAGTGACAAGTGGATTGGCAACATCAAGCTACAAATTTCCATTGCTCTCGATGTCTCAT
GAGGAATTTGAGGTCTCATGAGGAATTTGAGGTGTGTAAGCTGTTAAAATGGAAGCTATT
GTACCCGCAGAAAAAAATAAATGAGGAAGCTATTGGGCCTATGCTCTGTAGAGCAAACGA
TTGCGTGGCAACGCTCGAGGCTGGTATACTTGCGAGAGGGGGATGCAAACTCGATTTTTG
TATCAAACATGTGTGCCATCACTAGAGAAGGAATATCCTAGGCAATAACGAGGAGATATA
AACGGGGCAGGAACAAATCACAGAGTACTGTGTGAGCGATGCCATTACCATTTGTGCTCG
TATGGGCTGTAGAACGCTTTGGACTCCCGTACATTCATAGGGAGCCAAGGGCCAGTACTT
ATATAAGTGGGAAAAGGCAAGAAACTCCTTATACAATCGGGATATACAGACAAAGACTAT
ACACATCTAACACCCCCTCAAACTCATGGTGGGTTAACAAATACCGAGTTTGGAGAGAAA
GAACCCATGTTGTGCTCGAGTCTGTGCCTTTGTGAAGAAGACCGCCAACTGTAACTCAAA
GGACATATAGTGAAGAGTGATAGTCTGATCCTGCATAGCAGCATGCACAAAGTGGGCATC
CACACTGATGTGCTTGGTGACCTCCTGCTTCATCGGGTCTCGCGCGATACTGAGAGCATC
TGTGCTATCGGATAGTAAGAGAGTTGATGTAGTAGCAGACACACCAAAGTCCTCAAGTAA
CTATCGTAACCAGATCACCTTAGCCATTAGCATAGCCATCGCACACAACTCAGCTTCGGT
ACTCGAGCGAGAAACTGCAGTCTGTTTCTTGGTCTTTCGGGCAATAAGAGAGCCATCAAG
AAAGACACAGTAAGAAGATATCGAGCGGCGACCAGAGAGATCACTAGCCCATGTAGCATC
AGAGTAGACCTGAAGCTCGAGTGAGCTGGAGCGGGGAAAGAAAAGACGATGAGAGATCGT
GCCACGAAGATATCACAGAACACGGAGGAGGTGACTATAGTGGACAGAGGTGGGGGCTGC
AACAAACTGACTGAGAATGTGGACAGGATAGGAGATGTCAGGACGCGTAACAGCAAGATA
GACAAGGCT