Contig Data
morexGenes
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Map Locations of contig_160219 (5422 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_160219

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22080 1 374 bp AK248611.1 Available Available None
MLOC_22079 2 507 bp MLOC_22079.1 Available Available None





CDS Structure of MLOC_22080






CDS Structure of MLOC_22079






Contig Sequence (5422 bp)

>contig_160219 5422 assembly3_WGSMorex_rbca.fasta
AGGAGGTTTGAGGGTTCGACCTCTAAATTTTTTTACGGATTTGAGGGTTTAGGTGTTCTA
GTCTACGGGTTTTTTTGGACGAAAACCGTAAAAAAGCAGTTATTTTTAGAGGTTTGAGGA
TTTGAGGGCTCTACTAGACTTGCTCTAAGCAACTGACGGTAATATTGCCCGTTCGGAAAT
AAATCTTTATAGCATGACAATGTGCAACATAACTGTTTACTGCCCATGAAGCATTATCTT
CTACTGGTCATGGGAAGAGGAAACTGTACCTCCAATATGACCCCCCCCCCCCAAAAAAAA
GATATTCCATGATACGGTGGAAATAGGAGATAATGTATTCCAACTAAAATAATCAATCAG
GTCACAAATGGTTGACCCCTGTTTACTTTCTGCAGGCTCCCAGATGAAAATTTTACAATT
TTAAATTATCACCCTTGCGCCAATACTTTCGATTGCATACGTGCTTATGTCACAAGGTGG
TACGTGACTTGTAGCAGTAGCCTTTGTAAGTGGGGGTGGCAACATTGGAGGACTTCCTTG
TTGGTGGTGCTCTATTGAGTACCGAGTCGTGTTTTTCAGGGTGAAAACCCAAGGTCTCGC
CTTTATTGGTTGTCCCTAGCAATGGCCTTGTTGAAGGCATTGTTTTAGGAACACGGTCTT
TCTCAAGGGTGAAAACCTACGATCTTTAATCGGGCAACGACAATGCTTGTGCATTGTTTC
CTTCTTGTAGGCGTTGTTTTTGGAGAACCTTCTTTCTAGTTCGGATGTTGTCTTAGGTGG
TGGTTAGAGGGCTACTACTGCGGGTGATTAACCACCATGGCAGGGTCATTTTTTCCTTTT
TTTCTCTATGTATTTTTCTTTTTTGGCTGTGTGCATCCTAGATGTTCTTTGGCATCTTGT
TGGTGCAGAGGCTGGGTGTAATTGATATCTACTTGATATTAATATATTCCCCTTTTCAAA
AAAAAATGTCACAAGGTAAATGTAGTTGCTTATACTCAAGGGAGATATTAGTAATTGTTG
GCCATCGCAAGGCTTTCAGAACAATAACAGCATATAGATTAACAATGACAGGTTAAGGAA
ACATACTCTGAGTTCTCTCTAAAATAGGAAGCCCTTTTGTCAATAGCTTTCATTATCATA
GCTTCGGTGATATCAATACCAGAACTGTGATTTTTCGCCCCCTCTGGGTCTTTATTGGTT
TCAGTGGACCTTGCCCCCTGCTCATCAGAACTGGAGGAGATTGTGTTTGAGCCAAACATT
GGTTGGGCATCTTCTGATAAGTTATCCACTTTAGCTTCAGCCCTCTCTGATGCATTATCA
GTACTCTCATTGTCACAACCAGAAAACACCTGGTATCGTGCACAACGGATAGTAAAACTG
AGCATTACAGAAAGCTGAGTACATAATATGTGATGAATACAAACCTAGCGGATTCTATCT
GAAATTAAGAAATACAAATACTTCTGCCTCCGTTCCAAATTAAATGAAGTTCAACCTTTG
TCCTAAGTCAAAACTTCTTTTTACCAAGTCTACAGAAAAATACATCCACATATACAAAAC
AAAATTAATTTAGTAGATCCATCACAAAATATATTTCCGTACCATACATATTTGATGTAA
AATATCGGCACAATTTCCTGTAGACTTGGGATGGTAATTTAATAATTTGGAATGGAGGGA
GTATTATACTAATGGAACTAATTTTCTAAACTTCCAAACAAAACTTAAGGAAACTAACAT
CTGAACTAGTACGGGTTAATGGACTCAAGTGCTTGTTCTACGACGTGTGTGTTATATCAA
GTAAATGTTTATTATGTTGTCTTCGCAAAATATTAAATATGTTATGGGTACTCAGTTTTC
ACATTCATGTGAATAGTCAACAGTCACAGTATTATCTTGAAGATAATCAGCCAACTTTGC
ATTACAAAAGAAAATAAATTAGTCAACTACAATGCCTATATTTTAAATAAATTTGATTAA
ATCGGAGACAATCGTCCATACTTACTTTTGTAGTAAGACAACAATTTTTGGAATAAGACA
AAAAAAACACAGTGCTCTGAAGAGAGTAGGAGCTAGGCAGGCGGCAGGTTGGCACCTACG
GTCTACTAAGGGCTAGGCAGGAACAGTCTACGATTCTGAGATAAATAACTTCATTTTCTT
AGTCTAACAAGATCAGCCAATCTGCAGAATACACTATTTGCAAAATAATCAGTGCTAACT
TCTTAGCAAATAAACAAATACAATTAACCTTCCATGCAGTCAAAAACAATAAAGGCTATG
GATACCTTTACATAATTCAGCCCAAATAGCTTCTGTAAATATTAGAAGTAACGTTTAAGA
AAGTTAAGATAAAATATCGTTAAACTAAGGAACCATTAATTGCATTTGTGGTATTTACTC
CATGTTGATTATTGCATCATCGGAAAGCCCGTGTACATTATCCTCCATCATACCTTGTCA
ACACATTGCTTAATGAACTTCTTATGAGGATCAAGTGAATTTATCTTCAAATCCATGTCC
TTCTCCAATGTTCTCCTCACACCTTCAAGGGTCAAGGAGCTGAAAAGGGAAATATCAGTG
TTATATTCCTCTTCGTTGACCAAGCTAAATAAGAGGGCAAAATCATCAAAATTCCTTAAG
GAAGGAAGAAGAAAACACCGGCCTCTACTTCTAGACTAGAAAGCATAGATGGATGGTACT
ACCCAGAAGGAAGAAAACACCGGCCTCTACTTCTAGACTAGAAAGCATATGGATGGTACT
GCCGATCTACAGAAACACCTTAAGTTTGTCATGATCCCTTAGAGTGCTGCCTGATCACAA
GAAATCTGCTTCCAAGCCCTTACTAATATTTGATAGCTGCATTTGGTATATAGCACTTGC
AACAGCTTTGCAGAACACTACGGAGAGGAAGAACCAACCATGCACATTGCATTACAGAAC
ACCAAGGTCCATTCCCTCGGGCTAACACATGTGCCCATACACAGCAATGAAGTGCCCATG
AAATCGACAAAGCCAGCAGTACACAACAATTAACCGCCCGTGAGGTTCCAGTTCCCTCTC
TCTAAAGGATAAAGCCCTAGAGTTTCCTTTTCATTCCCCTTGAGACCTAAATCTTAGGAG
CTACAGGTACTGTGCCTGTCAGGCAGTAGCCTGCAGCAGCTGCTTAGATTCAGTTAACGA
AGGGAAGAGGTGGGCCCTGATGATTCAAGCTCAACCATTCGATCTCCATCCGACTGACTA
GGCGCTCACTTACCGCTTCGTGCCTGGAGTAGCTCGAGCCCCATCGTCGATCGTCGATCC
AACGGCTTATCTTCATCGTGCTGTCCCTGTTTACTTTCCGACACTCGCATTGTTCTATTT
CCTGTTTTCGGTTTTACCTTCAGTAACTTTTCTGGCTTATAAGCCAAGGATTCGGCCCAG
CTGTGGCATCAAGCATTGTAATAGGGTAGAACACTAGGCCGCTGTGTCCCGGCTGGCTCT
CGTCGTCCCTAGGCGGCGCAAACCCTAGCCAGATCTCCTCTTGTAATCGTTAGTCTGTAA
TTAAGAGTGTGATCTGAATTCCATGTGTGTTTGTCCTAGCTCGGTCCTCACAATTGGTAT
CTAGAGCCAGCGAGCCTTGGAGGCATTTGAGATCTGGATCGAGAAAGGTTGGGTTTCGGC
CCGCATAAAATTCCTTCTTCGTCCCGATCTCCGACGGCGGTGTGCAGCTCGGCGGCGTTG
ACGGCGGTAGATCGTCCGGGTGTTGGAAGCGGCTGGTCAATGGTTGCTAAAGAACACGTC
TCTAGTGTGAAATCCCACCCAACCGACCCTTCTTGAACATCAGTGTCGGCGCGGCGTCGT
CGACGGTGTTGCCGGCGGCAGGTAGGACGCTCTCAAGCTCCGGTTGCAGCTCAGCTGTGG
TAAAATCCCCTGCTTGTTGTGTGCGTACAGATGCGGTTCGATCAGGTCATAAAGTTCACT
GCTTTGTGTAAACCCTGATCGAAGGAATGGTCCAAGTCTCTTGTTCTCAAAGTACAGAGC
AGTTGGAAATGGATTCGCTTCAGTTGGATATCAAGGCTTTGCAGCATGACCGTGATCAAG
ATAGGAAAGAGTTCCAAGAATTCTAGTCCACGGTTAACAAGAACTTCACTGATGTGCAGA
AATCTTTACTGGAAATGCAGTCTACCCTTACTCATCTGATCAATGCCATCACTCCCAGAG
AACAACCCCCTTCTACTCCTATAGCTGGTCAGGGTAGTGCTCAACAGGTCACTCCAGTTC
CACTAAGAGCACCTACGGATCAATTGCACACTCCTATTACTGTGGGGTCTCCTGTTTTAC
ATGATGTTGCTTCTGGCAAAGAGTTGAACTTGGATGGTTCTCAGAAACAGCCCTACAGAC
ACCCCAATTTTGGAGCTACTAAGCCTCCTCCTGCGGTTCAGGATACCAGGGCTGTGCACA
CTAACCCTGCTCCTGCTGAGATCCAGCAACCTGACCCTTGAGTTGGAGTTGGATAATGGG
GAAGGTGGCCACAGAAGGACTCAAAAGGGCCAAACGTTGGTGAAACCTGCTAAAATGAAC
ATGCCTGAATTTGAGGGAGAACACTGACTCTTGGATTCAAACCATGGACTTGTATTTTGA
TGCAGCCAGAACACCCCGAGAAACAAAAACAGAGATTGCTGTTACATATTTAAAAGGCCC
AGCAATAGAATGGTGGAGAGGAACTGGCTATATAGTAGCAACTATGCCATGGTATAGATT
TTGCAGGTATTTGGGTGATAGATTCTCTGAAACATCAATCTGTGATAATGTTAGAAACTT
CCATGCTCTTACTCAATCTGGTCCTGTCAAGGAGTATGTTTTCCAATTTGAGCATGGTAT
GAACCTGATGAGAAGGGATATCCTGCTCTACCAGACTCTTACTGCATGAACAGCTTTATC
TCTGGTCTCACTGACAGTATTCAACACTACATTCAGTGCCATGAGCCTCCTAATCTGCAG
AAAGCTATTTGCCTAGCTAGAAGTCTGGAACAGGCTCAACCACCCAAAAGAACAGTTTAC
CAGCCACTACAACAGCCCTTGCCTGTGAAAAGACAAGTTCAGTTTGTTCCTAACAGACCC
CAGAACATAACTCCATCTGCTGTAATTGAACAAACCAGGCAAAAAGAAGTTTGTTACAAA
TGTAATGAGAAATGGTTTCCTGGTCATAGAAAAGTGTGCAAAATGACCCAACAAGGACAA
GTCCTGGCCTTGCAAGCTCAAATTTATCAGATATTATTTACTTCACTGATTATGAAGAGG
ACAAATGATGAGTTTGGGTCAGATGTTCCTGATCAACATTTATAAATCTCCATGCAAAGT
GTCAAGAAATACAGCCTCACTATGTCTGTTCAAATTAACAACTGCACTGCTATGGCCTTA
GTTGATAGTGGGAGTACTACTA