morexGenes - Barley RNA-seq Database

Contig contig_160213
Source Contig contig_160213
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_160213 (7547 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location
Predicted Genes from contig_160213

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22072	1	3544 bp	MLOC_22072.1	Available	Available	LOC_Os07g04900.1, FRAME:-2, EVALUE:0.0, 13107.m00435 protein NBS-LRR disease resistance protein, putative
MLOC_22074	1	346 bp	MLOC_22074.1	Available	Available	None
MLOC_22073	1	271 bp	MLOC_22073.1	Available	Available	None
CDS Structure of MLOC_22072

CDS Structure of MLOC_22074

CDS Structure of MLOC_22073

Contig Sequence (7547 bp)

>contig_160213 7547 assembly3_WGSMorex_rbca.fasta
TTGGTCTATGCTATGCAAATCAGCCTCTCCAAAAATGTTCAATTCTGCTCCACTGGATGA
TTTTGAGTACCAAAAATGCGCTGGTAGCTTTACATTTTCCATCATGACATGACGCAGACT
TTCAATCCAGGAGATGAGAATCACTAACGAGAATTCTGGACAGCCGGTTACCTCAAGCTC
TTGTAGCTTGGGGAACCAATCTGGGGAAACAATGTGGTTTGGGAAAGGAAACCCCAACAG
TTTCGGGCACTTCCTAATAATAAGCACTTGCAAAAGTGGGAACATATGAGCATCCGGTGG
CAACAAGTCTCCATCAACGGAAGACTCTTGTTCGCCTGTGTAAACCCATTTTTCAAAACT
TCCTAGGCCAATGAGTGTAAGCTTTATTAGCCTGCAAAAGCTTTTCTCTACGATAAAATC
CTTCAGTCTGGCAATATTCTCCAACCTTAATTCATGAAGATCCCACGCCTTCCCTAATGA
AGGGAAAACTTCCCAAGAAACACCATCCAGATAAAGAGATTGTAGAGCCTCAACAGCAAA
CTCATCACCCAGCCATGTTGGACAAGACGGACCTCCATGCCCTCTAATGCACAACACCTG
AAGATCTCCATGTGGCTGAAGGATCTCAAGAACCGCTGCTTCCACGCTAGGCTCAACACT
AGATCGCTCACTATCCCAGCACAATGTTAACCTTCTCAGGTAGTTTTTCTCTATCAGTTT
TGCTTGAGCTGCTTCTTCTTCTGTGTGTATTTTCTCAAGGTTGTAGATGCCAAGCTCCCT
GAGCTTGCTTAAATGCTCTAGTTGCTTTGGTTCAAATCCTTCACTTTTTTTATTGACTCG
AAATACCTTCAACTCTTCTAAGAGTTTAAGTTTTCCCACATTATAAATATCAGAATGAAG
CTGACCATCACCTGGGGCATAAAAATGGCACAATTTGGCAAGGTTGCTCATGTCTTCGGG
CAAATCACAACTCCCTTCCCATGGCTGAAGATCTAGAACCCTTAAATGATAAAATTTAGA
GATGTTGAGTGGTAAATGCATCTCTCTGTCACATGTCCCTAGACATAGGCATCGTAGGTG
GACAAGTCTTGAAAAGTTATGTAACATGGACTCCATGGGATACATCATGTCAAGCAAATA
AAGAACGCGAAGAGCATTTGCTTCCCAAAGAAAATCACCAAATATCTTGGCCAAACTTCC
ATCCATTTTACCAAATAACATAAATGTGTGCAAATGTTCAACCTTCAATTTTGTCTTCAG
TTCTTCCAATTCACTTCTTAATTTTTCACCTGACACTGCATCATATTTGCCTAAGTCGTG
TATGGTTATAGACAAGTGATGGGTGGTGGGCTGAATTTCCACTGATCCAACATTAGGGAG
ACATAAACAAAGACAATCATGCGATGCAACCTTCATTGCCAAATCATGTAGTAGGTCATG
CATAACATATAACAAAACACCATCAGTTTCCTCTTCCTTGAAAAATCCATAACTGACTAA
CTCAGTTAAATTGCTCAAACCTATATCTTCAAATGTTTGATTTTGATCACTAGGTATCAA
AATATCTAGTCCGATCCACAGGCTGATGAGATCATAGCTTCTCAGACGTATATCTTCAGG
AATCAATGCAGAATAGGAAAAACATTGCTGGAGATGGAAAGGGAGAAAGTCATAGCTAAG
CCTCAAGGCAGACATAATTCCATCGGTTTGCTTTTCCCATTCTTTACTTTTGAGAACCCT
TTTCCAATGATACAAACTATGTTCTTTACTCAGTAATCTACCAACAGTTTTTGCTGCAAG
AGGGGAGCCCTTTAGTTTTTCCATTATCTTATCTGCGGTCTCAAGCAGAAAATGTTTGTC
CCTTGGACATTGCTCATCACCGAAGATAAATGCAAGGAATAACTTTCTAAACTCTTCAGA
TTTTAAACCGTCCAGTTCTATTGAATGGCCAGTTGGTTTAACCTTCTGTGCTATTGCTTG
AAACCGGGTTGTGACCAGAACCATGGAACCTTTTTCTTGTGATTGGTTGAGTATCGACAT
GAGTTTTTCCCAGTCACCCACATTACTAATCTGCCATATATCATCCAATACAAGTAAGAA
CCTTTTAGATTTCAATCTTTCTTCAATCAACTCTTCAATTGTACTGCCCTCCTTTTCACT
TTCAACTGGACGAGTACCTACTTTAATCTGTTCAAACACCTTATCCAGATTGAAATTGAA
TGACACACATATCCAAATCATTACTGGAAAATGATTCTGCACCTGTTGGTCGTGATATAT
GTGTTGTATCAGAGTTGTCTTCCCCATTCCCCCAGGACCCACAACCGGAAGCACAGTCAG
ACTCTTGTCACGGTATTGACCCAGGGTGATATCATGTATGATGCTATTCATGACACGATC
CCTCCCGTACATTTTTGGCTCATCAATTCGACCTTTGGTGATGGGACGGCTCTGAGCAAT
GTCTGGGATGGTTCTAGGGCCACAACCTTGCAGAATCTTGGTAACCTCGTTGCGCATAAG
CTTTAGTTGCTGTACAGTGTCCTTCATCCTTTGGGAGAAATCCACCCTATTAAACTCATG
CATTGGTTTTCCTTGCGCATTGGCGCCAACTTGATCACCATGAACATGTGGATGCGGGGA
AGATGAGCAAGGGAGGAGTTTACTGAGCTTGGGCATGCATCCACTAAGCTCCTGACCAGC
CTGATTTGAATCGCCACCAGGTGATCTCTGCCTGCCACACGGCCAAGCTGCACAACAACT
GACATTTTGCCTTGCTACTCCCTGCCGGTGATCGCCACCGGTGTTGGCACCAAAGCAGTA
CGACAGCTGTTTGGCAAGAGCTTTTGCGGTGTGGCGAGCATTGAGGGCGAGGTTGCAGAC
GCAGCCCTTGCCGTGCTGGTCAGCAGCATCGTACGTGCCGTGGAGCTCGTCGTGGATGCG
GAAGTAGTCCAGCTCGTCCAGCAAGTCCTCGGCGTTGCGCGCCGAGTCGAGCAGCCTCTG
CAGCAGCTCCTCCATGGCCGTACCGCAGATGTCCTTGCGTGCAGCTTGTTGGAGCGTGGC
CTTGACGAGCAGCAGTTGTGTGCTCAGGGCCTCGATGTTGGGACCCAAGTTGCTGGTGGC
TGACCAAGCCCCCAGCACGCCATCTGCAACGGGGCCTAGCGCCTTCTCCACCACCCATTG
TGCCGCACCCAGGGCGGCCTCGGTCATCGCCGCCTGCCCGCCTGCCTGCCTGCCCGCCTG
CATCCAGGAATCAAAAAGGATTTTAATTTATTTTGTTGTAAGCAGGCTGAATTATGAATG
GGCAGGGGTATCCCAACTAGTATCTGTTGAGAGAAATTTTCAATCACAAGAGAATATATA
GTCAAGGCACCAGGACAGAGCCATTTTCAATCACAAGGGAAGTATAATGCTGAATCAAGT
CACGAGAAAAGGGGAGGGCAAAAACAGAGCAGGAGAATAAGCACAAATAATAAAAATGCT
TAACGAAAATCTTGTGTATTTCTCTGTGGCCAACAGAGAGATCTGACCATTGTAGTTTGT
GTATTATTACTAACAGACACATGTAATTTGCGTATTCAAAGCTCACAAATCCGAAGTCGG
ACTCGGACCGAACCATGGGTGGGTTACAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA
TCTGACCTGCTGCTGCGCCGGTGCGGCTGGTTAGGTTCAGATACGGCGAGCTGAGCTGCG
TCCCGGACGGCGATGTGGAGGCGACGAGCGGGACGGCCGGGGAGCCAACCAGCTTGAGAT
TGAGTGTGGAGTGAGGAAAGTATCTCTATCGCCAAAGATTGAGTGTGGAGTGAGCACTGA
GAAGTGGAGTCTCCTCCCCTGGATCTGGATCGGACGCACACTGTTGCTCCTGTCTGTCTG
TCTGTCTGTGCTGTGCAAACTGTAATGATTAAAGTTTTTCCTTGACTTCACCTACCGCAA
AAGTCTCCAACACCGATCCATAAATATGCTCCAGCATCTGTCCAAGGATATTGGTGCGTA
AACTGGTCATTCAAAATTATTCGCATATGTTTCATAAATTATTTAAACGGTGCAGACGAT
ATTCATGCAAAGACATTGAATTTAAGTAAAGTTTGGATATAACTTATATAAAAGTCCTAT
ACCAGACGACCACCTCGTATGCGTCGTCGCTCCGTCCTGTCGAACCGCCGTCACCCTCCG
TGCCGCCGTCGTCGTCGTTGTCCCTCCAATGGCGCAGGGATACCGGAGGGGCGTGACAGT
CTTGTCCCGCGGTTGCCTACCACTCACGGAGGAGCCGTTCCGGCTCCTGTTGCATGGTGC
GGAGGGCCGCCTTGGCCACTACCGACGGCGTCGACTGAACCCTGGTACCAGCCTTGCCCC
TGCCGGCGTTGGCGGAGCAGTTGCCAAGCGACCACTCCTCACCGATCTTGGGGAGCTTGT
TGTCAAGGCGTCTGTCGGTCGTCCCTACGGTGGTGATGGAGTGCTTGAGCGTTCATCCCC
TGCCGTCTCTTGTCCAACTCCGATGCTATTACTTGGGTGTTACAATTTGCCGTTCGTTGC
GGCAAATTGTCGCCACAACGTGCAGGGCAACACTCAAGATTGAGCGAAGTGGGTCGACCC
AGTATGCAAGTCATTTTGTTTTTGATTTTGGGCACCTTCTTGAAGTTCCACGCCAGTTTT
CTTTGGTTTTGGAAACCTTCCAGACCGTTCCTGAATTTTTTTTCTCTTTCTTTTTCTTTT
TTCCTTTTTTTATGTTTTTGTTTCTTTTTTATTTTGTTTTAATTTTTTCCTTTTTCTTTT
TCAAGTTTATTTTTCCTTTTTGAACATATGTTCAGAAACTTGTAAAATGTTCACTCTGCA
TTTTTTTTTCAATTGTGTTCCTTTTTCCGTAATTTTCCTCCTTAAAAATTTGTTTGAAAT
TTCAAAGAAGTTTTGAATTTCAAATTTTGTTCCCCTCTTTTGAAAGAATTTCAAGTTCCC
AAAAAAACTTCACATTTCGAAATTGTGTTCGCAAATTTGAAATATAGTTCATTAATTTTA
AAAATGTCCATGTTTTCAAAACTGCCGAACAAGTTTTTGAAAAAACAGAATCATTTCGCA
AAACAGGAGTATTTTTTGCAAATAATGACCAATTGTTTTGAAACAGGAACATTTTTTGAA
ATTCCAGAACAAAACTGGAAACACAAACATATTTTGAAACTTCTGAACAAAATTTGGAAA
CACAAATATATTTTAGTTTTTTGAACGAATTTTAAACTAGAACTTTTTTGTAATACCTGA
AGAATAAGACAACACGAATTGTCTTTGGAATTTATGAAAAAGTCTTCAATTTGTGTACAA
AAATTGAAAAAAACAGATTCTTTTTCAAAAGACATGAATAATGTTTGCAAATAATGACCA
AGTTTTCCGAAACGGGAACTTTTTTTGAAATTCTAGAACAAAAATTGGAAACGCAAACAT
ATTTTGAAACTTCGGAAGAAAATTTAGAAACATGAATGTTTTTATGATTTGTGATTTTTT
TTAAACTGCAACATTATTTATGAACATTTTTTTGAAACACCTAAATAATAAGAAAACGTG
AATTATTTTTGGAATTTATGAACAAGTTTTTAATTTGTGAACAAAATTTGAAAAAAACAG
AAAATTTACCAAAAACAAGAACATTTTTTTGCAAATAAAGACTTTTTTTTTGAAATGGGA
ACATCTTTTAGATTCCAGAACAAAAGTTGTAAATGCAAACATTTTTGAAGTTTTGAGGAC
ACTTTTAGTTCTGAACATTTTTGATAAAAACAAAAATAAATCAAAATTGAGAACAAAATT
TCAAATCCTGAACAATTTTTAAAACAAAATGAACAATTTATTGAAAATCATACATTATTT
GAAAATGAAAACTTAAGTCGTTTGTTCCGTAAAACTGAACTTTCCAGGTATACCATCTAG
TCTTCAAGAGGTTTTGGCAGAATGTAAACAGAAGTGGCTACAAGCCTACTAAAGAAACAC
AATAACACGTGAAAAGCAAGCAAGAAGAAATTAGGAATGCGGGAGTAGTGATAGAAACAT
AGCAGTATGTTTGAAAAAATGATCACCTAAATATCTGTAGCTGGTACTGATGCTGTACTG
ACATGTTGATTGTGACAATCAAAATAGGCACGTCTTTGAATGACAAATAACCCAATTTAA
ATGCAACATATGAAGCCCATAAGATCAAAAGAACACGTTCGCAGAGAACCAAACCATATG
TTTATCACAGGTTATGTTAGTAATGAGTAGTAATCAGCCCTGCTTAAAAAAAACGAGATC
AATCCGGACTAGACTAGCTTGTTGGTATTTTTTTATAGAAGAAAAACTCCATGAACACCG
AGTGTTTAGCCAAGGCTCAAACACCGACGGACTGGCTGCAAACTCCAGCGTCAAGCCAAC
TAAGCTATGCTCGGTTCTTATAATCAGCCCTGCTTCAGCACACCTCTACCCAAAAAGGTA
TAAAGGGCAATATACAGACGTACGCACTTCATATGTTGGACCGCCAAAACGTATACGCGA
TGTGTACAGACGTACGTTCGGCTCCCCTACTCGTCGGACCCTCGCATAAACAGGAAAAGA
AAAGAAAACCATTGGACTCTCCCGATCCACAACCGTTGTCGCGACTCTGACCAGTGGCCA
TCTCCAGTCGTCGTCGACCCCGCTTGGATCCCATTCGTGAGTCGACGTCGGTGTTGAGCT
CATCGACATCGTTGGACGCGGCACCGTCGACGCCCCCCTCACACACGACACTGTTGCCAT
CACCCTCCTCGCAATTGGCAACGTCAAGCATGCCGTCATCAGCGCCCCTCCCGCATACGT
CACCGCCCCTCGTGGAAGACTTTTCATGTTCAATGATCTTTGATCACTGAGTTTCTGTTT
CAGGTGACCAATTTGATTTCGGTCCATTACTTTCTACTATGTTGATAAAAGATTGAAGGA
TCGTTGTGAGGCACATCGATGTCACGAGGTACCTCCATCTATTTACCATATTCGATATTC
AATTTTCTATGACACCACTGTTTTTGAGTCGAANNNGAAGACCCACTCACAATAGCTTAA
GAGCTCTTACAGTTCGTCGCTGCCATCGGCACATCAGCACATCAAAATGGTTCTTATGCA
TCTGGATATCAGTTTTGCCTACCTTGTGTGTGAATTCTTAGTGAACGTTTCTTCAGGCAG
CTTGGACCTCACCTTTGCCCCATCAGCACATCGGAATGGTTCTTATGCATTTGTGAGTGG
CATTGAGATTGTGCCCATCAGCACATCAGAGTGGTTCTTATGCATTTGTGAGTGGCATTG
ATTAAATAAGGATTCGGCAAGCTACAAGGGGAGATACAACATGTTACTATGTTACCTTTT
AAAACTCCCCCCACAGAACAGATAGTTGTAGTTACATTTGCTAAAATCTGAAGCATGTGG
CCTTTTGGAATATGCATCTTTTTTTTGTTCCTATTTTTTATTTGTTGGAGGACAACATGT
ATGTACTCATATTTTTGGTTCATCTTTTTTTATGTATTAATCGTTTG