Contig Data
morexGenes
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Map Locations of contig_160178 (2475 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_160178

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22044 2 1400 bp MLOC_22044.1 Available Available LOC_Os03g46920.1, FRAME:-3, EVALUE:5e-27, 13103.m05052 protein expressed protein





CDS Structure of MLOC_22044






Contig Sequence (2475 bp)

>contig_160178 2475 assembly3_WGSMorex_rbca.fasta
GAGGTGCGAAGAAGAGGTGCCTGTTCGGAGTCATCCCTCCAGAACAGGTGACTGTTGGCA
ATAGAGAGATAGAATAGACATGACTTTTCGGAGTTGGACACCCTTTCCTAATTAATTTCT
AACAGAATACATGTTTCTTCTCATCATTTGACATGTTGCGCATGTTTGTATGTATTTTTG
CACACATTTTTTTTCATTCCCGCAATGAAGTATGTGAATCTCGACAATTTGCGAGCGTGG
CCTTTGGAATCTCTCTCATATCCGGCGGTTCGGCGGCGGCTAGAGGAACCCCATCGATGC
CTTTAGATCAACGGAATCTTATGGGAAACCAGAATATACCCGGCCTAATAACAAAAGAGA
AAGATATGTCTTATGGGAAACAAGAATACGACAATGTAAATACCAAAAAAAGTTTTCTAG
AAAAATAATTGATCAAAAGTAACCATTGAAAACCTATGAAGATCAATATTGGATTATGTT
TGCACCTGAACAAAATGCACCGAGCAGCTATACCAAAGTCCAGCTCATTGACTATTTGTG
CAGCAATAGTGAGAAATAGAAATAGGAAATAAATTCGTTCTAGAAAAATATAGAAGCGTC
AAACAAATGCAATAGTCATTTCTTTATTATGCATATTAGAAACTCTGCTGATGCACAGAT
CTAAAGCGTTGAAATCCTCCGAAAGCGAGGCGAATAGACCCACCAGTAAAACAAAATATG
CCAAGCACAACAATATCAACTTAAAATCTTATTTGGCATGTCAGGCAAACTACACAGCCT
ATCTGCTTCTATGCTTGAAAAATCACAGTGTAGTGCATTTGGCAAACGAGAAATACAAGA
TGCACACCTTCAGTTTTGATGTCAAGTCCAAACTACTATGGAGATAGATAGTGGCAAACA
TGTCCATTTAATTTTTGTTCCTGTGTTTCATGACAAGAACTGACATAAAAAAATAAAAAT
AAAAATGGAAAAAGACCAATACAGGAGGGCTAACTGTAGAGGTGGAGTAGGAACTAACAC
GGTACACAGCACGATGTAATAGAGTGAGGTATTATCCAAGTATACTAGAAATGACATGAA
TTATCCAAGTTCTCCATGTACTGAACAAAAAAAGCACATTCTCCATCATTCACTGTTCTA
ACTGAAAGCATTACACTGAAGCACAACCATAAGAAAGATCGAATGTATTGAACATAACAG
CAGAGGTCTCAATCAGAGAACAATACAAGGGAACTGTCCACAATCACTTATGCAGTTTCA
AAAGCAATCTCAAACCACAAAAACAAATCCTAGCCACTAGTCAAATATGTAGAACATAAC
AGCAGAAAGCTGTATTTTATCATCAAACATGTCTGTCTGTCTAACAAGGTGCGTGGAACT
GGGCAAGCAGCTACGAGTCAGGTGCCCTGAATGGTAGGTAGTTAGAGCACTAACTAGACC
CGGCGTCAGGTGATTTGACACTCCGCAGCCTGCTGGAGCGTCGGACCGGGGTCATCACCT
CATCATCATCCTTGTTCTTCTGCAAAAAACAAGTTCACAACCTACAAGTTAGATGGACAC
ATCGTATTTGAAATTGACTGAACAGAGAAGATGGACAAGAAGAATCAAAGCTTACTTTCT
TGGCAGCGATCTTCTCAAAGGCCAAGAAGCTGCCATAGGACGACGTGGGGTATGACATGG
ACTCGCTCTTCGAGGCTGGCTCGAGGCCGACGTTCTCTTCCTCCTTGGTCGTCTTCTTCC
TCCTGCCCTGGCCGACGTTCTCTTCCTCCTTGGTCTTCTTCCCCCTGCCCTGGCCAGATG
ACAAGCTGCTGCTGTACTGAGAGAAACCAGAGTCACCAAATCGCTCAGTTTCTTCTGCCA
CAGAACCTTTGACAAGACGGTGGCCCTCACTGCTTGCTGAACAAGATCGAGTCTCGGCCT
CCTCGGCTTGCTCCTGCTCAGCCGGCACATTGGCATTTGTGGCAACCCCAGCTTGAGTCT
TCCTCATGGAGATTGCAGCAACGCCTGCTGAAAGAATGGCCACGACAATGGCAACACCTG
CTGCTGCTGCAGGCTTTGAGATTCTGCCCATGTAGACCGGCAACGTGCTCGAGTCCGACT
TGAGACCAAGACGCGGCTCCTGGCCCTCCTTGCCACTGCCGTGGTTCTCCTCGGGCTCTT
CACTCTCAACATCTTGTTCACGCTGCCCAGTGGGTTGGGATGGGGTGTCCAGATCCTGAC
TGGAGGATGCCATCTCTTCGCCATTGCTGCTGCCTGGAGCTGCTTCTGATAGTCCAGCAT
TAAACTCGTCAACTGCATTGGAGTAGCCTGATGCATCAGATTCTTCTTCCACTACAGCAA
CACCGTCTGATTCTGCAATCAACTCAGAAACTGCATCCTGGATGTTCAACTGCTCGCCCA
AGACAATGGCACCACCATAGCTGCTACCTGGAGCTTCTTCTGACATTTGGACATCAAACT
CATCTACTACCATGT