Contig Data
morexGenes
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Map Locations of contig_160175 (3399 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_160175

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22038 1 1014 bp MLOC_22038.1 Available Available LOC_Os10g40584.1, FRAME:-1, EVALUE:5e-18, 13110.m03761 protein zinc finger family protein, putative





CDS Structure of MLOC_22038






Contig Sequence (3399 bp)

>contig_160175 3399 assembly3_WGSMorex_rbca.fasta
CCCGCCCCCCCCCCCCCCCCCGCAGTTCCAGACTAAGAGATTCATTGCCCCCGGCGGTCC
TCCTCGTGGGAGGCCGCCGATTTCTCGCTTGATAAACCACTTGACTCAACACGAGTTCTC
TTACTATTGCTGCTGCTAGTAGGCGAGGCTGATTCGTCATCCTCACCCCTCCCTTCAGTA
AGAGCCAATACTCCCCCCTTTTTAGTGCCCGCCATGCTCTCAGAAGCAGGCCCTCATCCT
CCATAGCAATCCTTTTACGAGCAGCAGGATCCACTTGCATGTTGGTGTGTCCTTCCTTGG
ATGGCTCGAGGCCGTATCCAAGAATTCAGGGTCTAGCACAACTTTCTCCGGTGATTTCTT
CTGTTGAGGTTGTGGCGTAGTTTGCCTCTGACTTCTGTCCCTGCCGAAGCTTTCATTGGG
TGTGGGTTTATTCAGCCCATCTACGTATAGCCAGATGTCATATTTCTTGTCCTTCTCCTC
ATGAACCCCTCATCCGCATTCCTTATACTCATGGACGACCAGCCCACATACGCTGCAGAA
GCGTGCGAGCTTCTCATATCGCACCAGGTAGACTTGGCGTTCTTTCCCCCTCATGATGCT
GACAAACTTGGTTAGAGGGCGTCGAACATCATGTCGAACCCTACCCCTAATGTAACCTCC
ACGGGTGTTTCCGTTTAGCCTCATCTCCAAAATCTCCCCAGAGTTCCTGAGTAAATTCTC
CACGATATTCTTCTTGCAAAACCCTTCTAGTATCTTGTGGATGTGCAACCAAATTGGCAT
GAACACCATTGGCACCTCCTCAGCCTTTGTGAAGCCATCATATGGAACCATCAACACCAG
CAGATTCCTAAAGAGCCAGGGCCCTTGATCCATTATACGTTCCCAGTCTCCCAAGCATGA
TGCCTGCACCATGAAGAGCTTCGGACCAACCAGGCGAAACTTCACCGGCTGCACAAGATT
CCAAGCCGCACGCATATCCTTGAAGAAGGTCGCCTGGCTGAAAGATTTGTCGGTATGATA
CCTAGCAAGCGCAAGCCATCTCACGCTTTCGTTGATCTCCGGATCAGCCTCATCAATCAC
AAGATCGTTGAAGACCTCATCCTCCAGATTTAGTTGCTCCATGAAGTCGTCGAGGTCCGG
CGTTCCCATGGATCCGCCTCCAGCACTGGTGCCCGACAGGGCATCCGCAGGGGGCTCCAT
CGCGTCCAAGGAGGAGGACGAACGAGGAGCAGCCGATCAATTTCTCCGAGCAATGGGATC
GATCGGGACGGGTAGACTCTCAGGAGACGAAATCACCGGAGAGGAGAGGAAACCCTAACC
TTGCGGAAGGGGAGCCTAACGTGTACGCCAAGAAGAACTTTTTGCTCTGGCTAGGTGCGT
GTTAGAAGAGGAAAACTAAGGCCTCCTTTGATTTGGGGAAATCTTGTGAGAATTTCATAG
GATAGGATTTTTATCAAAACAAATCCTTTAGAGCCCTTTGGTTGGTAGAAATAGAATCCT
ATTAATATGGATGAATTCTTCCTATCCACATTTCATAGGAAAATAAATATTAACCTAGAC
TCAATGAAAAAAAAAATCTATGATGTGAACCAAATAGCATCGTCTTTCATAATCCTAATA
GAATTTGAGATACATGCATCTAATTTCCTATGACTTTTATATTCCTATTATTTTTCTACC
CAATGAACCAAAGGAGGTCTGAAATTATCCTCTTCTAATACCGGATAGGGGAGTTGTCCT
TAACTGCTATAGTAGTAAAGTCTTTTTTTTATGTTTTTAGTAGTAGTAGTAGTAAAGTTA
ACATGTACTGTAGGCATTTACCATTTTGCCATACGAACTTGTTCCTATGCGTCTATCCAG
GATTCCTACCTTTGTCTGCCCAATGATTCACACCGAGCGTGGTCCGGTGAGGCATGCGAC
TGCAGTGAGCTGGATTCGGTGCCTCAACAAGAGACACCGCAACATGCCATGCCAATTAAC
TCACGCCCTGACCCCCCTACCGCCGGACGTGCAAGATCCAACAGCCAGGGGGTGAAATCT
TGCAGGGCTATATTTTTTGCTGGTCCTATACTACATGCTAGCCAGAAGCACAATGGGAAA
AATCACATCGGGATCGGTACTGCTCCGTAGCATATAAACACAGATGAGACGACATATGGC
CGAACAAAGATAGATGAAGACCACCCACCAAACAACACAGACCAAACAATACAATCACCG
TAAAAGAAAAAGGTGGTATTGTATGGTAGTACCACCTGGAATCAGCCAGTTCAGCGGTTG
GCGTAACAGGGCATCTAGTGATACTGAAGTAGCAACAGAATTGACACTGAAACCTATGCT
GCGAAACATCTCCAGAGGCAAGATCACCTGAAGACAACCATAAGAAGAATGTACTACCCG
CTCCTGACATGCGTGATCACGAGCCAAGAACGCGACATAGCAAGCAGCCAAGCATGGCGA
TTTTGGCAATGGGATGGATACGGGCAGGCAGCAAGGGACCAAAGACGACAGACGTTTTCT
TCTTCCTCCAAGGACCAGACCACGAGCCCGTAAACTTTGCGCCAGGCCTCTGAAGATGTT
GCCAACTTCCTCTTATATCCTACCTGACAAAAAACACATACGGATGCTAATAGCCTTCAA
GCGGCGACAAATACTGCCTGGCAATGGCAAAGGGAGAGAGAGCTGTGCGACAAGAAAACT
TTAAACCTAGGGCGACAAATCCCTGCCCCGGAAAAGAGGGAAAGACGCCACAAAAGATAA
AATTTCAGAACGGAGTTCGTACATGCATGCAGAGAGTGATGTTTGAATCGACGGTGAAAA
GTGAGACGGGCAAGAACATTTTTATACACCATTTCAAGATGAGATTCCACGCGAGCAAAA
AGAAAAAAAGCAATCTTTTACTGTTTTACACAAGGGCTTGGGTCGACGATCTCTGTCAAT
TCTACGTACTGGCACAGTGGCAGCATCGCCTGCCGGCTCAGGAATGTTAAGCACGACACA
AAAAGAGGATGGTAATTAGGTACGATGGGGTGGTTAATTTGGCGCGCGCGCGGGCGCGGG
CGCGGCTAGACCTTGTAGATGATGAGGAAGCAGGGGAGCACGGCGCGGCTGTCGAGCACG
ACGAGCTCGCCGTTGCCCATGTCCACGGAGTCGTACTGCGAGGAGCGGTGCCGGAGCGCC
TGCATGTCGTCGCCGTGCGCCTGCCGGACGCGGCCGGCGATGACGCGGCACACCAGCATG
GCCCTGCGGCCCGCGCCGGGCGACGGCGCGGCTCTGGCGTGAGCGGCGCCGCTGCAGGCG
AAGGTGCGCACCGCGGAGCCGGACGGGCCGAGCTGGCAGGTGGCGACGCCGGCAGAGAAG
ACGCCGCCCGCGCCCGCGCCCGCGGCCGGGCGGCACTGG