Contig Data
morexGenes
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Map Locations of contig_160134 (4001 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_160134

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22013 4 1954 bp MLOC_22013.1 Available Available LOC_Os06g41770.1, FRAME:-3, EVALUE:1e-71, 13106.m04362 protein bZIP transcription factor domain containing protein, expressed





CDS Structure of MLOC_22013






Contig Sequence (4001 bp)

>contig_160134 4001 assembly3_WGSMorex_rbca.fasta
TATATGGGACAAGTTTTGTATTGAATTATTTAGTTTTCTTCGGTGATTTGAATAATTATT
GTACTTTGGATGATTATTGTATTATAATATTGACATTTTCTTATATTGCACATTAGTAAT
TCTGATTTATGGGGTTTTCGGTTCGCGGGTCGATGTGGCGGCGCTCGAGCACACCCCGCA
TAGCCGACCCGTAAAAGAGCATGTTATGTGAATATCCTTTTTTACGGGTCCGTTTATCGG
GGTCTGACTCTGTCCGCGTCCGCGTCGGCCCGCAAAACCATTTTTCGACGAACTATAAAC
GAGTTTTGTGGGTTGGCTTTGTACAGGATCTGCTAGAGATGCTCTAAGCAGCCACATGAG
CATTTTCTAGCCCCATATGCGAGTATCGTTGACCGGTCAAAACTGACGCCCTATTAATTA
TTGACGGCCATAGTTGGTGATAAAACCACAACCATATCCACATGGAAGCAGTCACGTCAG
GACTTGTTGGGCCCACTTGTTGAATTTTTTGACAGGTCAAACCGACTACTGATGACGGAT
TATCATCACCAAAAACGATCTTAGGTGACAAACGGCTTATAATAGGTGACAGTTTTGGCC
GCCGCAAAAAAATGGTCATTCATGACAAAAAAGGGTTAGTCACCTAAGCCACTGATCTTA
GGTGACACAAAAAAGTGGTACCGTCAAGATTTTATTTTCGTGATATTGCTTCGGTGACGA
TGGGTGTGATGGCCAAAAACTGTCGCCTGACCATTTTGAGTGACAAAATCGGTTTTACGT
TACACAAGTGAACTGTCACTGAAAACCGTTTGTTCTGTAGTGCAATCTAGCCCTCAATCC
CACCCGCCCCACACTATATGGCTTGTGCCACCCGCTGCCCAATGGCGACCTTTCCATGCC
CCATTCCCCACCCCTAGCCACACCGAGGCTCCCGTGCCACACTGTCAGCGTGCCTCTTCT
TCGACACAATGGATGTTACCACCCCATGTGATCCACTCCCATCCTCCACCTAGCTCCCCA
CCTCTTCTCTTCAAATCGTTATTCCGGGAGTCTACTAGGACCGAGTCGCCTGCCGTGCGC
TTAGAACAACAACTTGAGATTTGGTGCCTTGCCACCTCTGACACGCCCTCACCCGTTGCA
TGTTTCCATCCTTGACGTCGCTTCCCCGACCACCGCGGACGCGATATCGTGTCTCGCATC
CTTCCCCCACATAGCTCTGAATGGCCGCTCCCATTGACACCTTGAAGGTGCTCGACAAAA
TGTCTTCTAAATATTTTTTCAAATATATGATGTTTGAATGAGTAATAAAATTGACGATGT
TCACTCACATTGGAGGGTAGGAAAAAATATGTATGTATTGTGTGGGGTAGGAACATTAAA
GTTTGAATTATTATGATGTGAAATTGGAATAGGGTCCAGATGCATGAACATGAAGAAAAT
GAAATATATAGAGTGCTAAATGAGAAGAGGAACATCATCAAAGGGAAATGAATCTAATAA
ACATGCCGTTTTCAGAAGGTTTGGACAAATTGCAATTTATCACGCCACTTACAACTGGTG
ATCAAGTATATACAATCGTTATTATATACTTCCTCTGTTCTAAAAAAAATTGTCTTCTGG
ATATGAATGTATCTAGTCACGTTTTAGTATTTTTAATACATTCATTTCTAGACAAACTTA
AGATAAGAATTTGGGACGAAGGGAGCACTAATGTTCTATTTAAAGCATCTCTAGCAGACG
CTTGATAAGCAGCGTGCTGGAAAAAACAACTATATAACGCGCGCAACCAAAACTAGCGCT
TCAGCAGCCATGCTAAAATCTCGCATGCGGTAAACAAGGTTCAGCACACTTGGTAAAACG
CAAGGTTCAGCACACTTGGTAAAACGGCGTCACGCGCAGCGTCCGCTCGCGTAAAATCTG
GACTGCGTAAAATCTGGACTGCTACAGGTGAGGCCGTCGGATTGGATGCCATATGTTGGA
GCAAACACCCTCCACTTACACAAAATGAACCATATAGCTGCTTGCCGTTACTGTATTTTT
GACAACTACTCTCAAGATTTTGTGGCCATTCACTTGTGAGTTCACTGGTGAACTTTCTTT
GGTTTGAATTTGACATCAACGTCATTCTGGCATTGGCAAAACAGGATTCACATAGTTACA
TAAACCCAGAGGGTGCCCGAACTTACGCCAGAGACATAAAGTAACACGGAATGCCAGATT
TCAAAACTAGCATCTGATTAGAAGATCATAAAACAAGAGGGGACGGAGAGAGAAGAAAGG
TACTCATGGATAAATCCACGGTTGCAGCAAGAGAACACACATAACTACACTACATACTGG
AAACTTGCGAATAAGCTGTCACTAGTCTAGCAAGCAGCAGCTGCACGCAACGGCAGAATA
TCTAGCTTGATCCTCTCCCTTGTGCCCCTCCAGCGTCTTCCATGGAGTAGAAGCTCCAAG
GTCTCTGGTTGATCACTGCTTGGCTTTCCGGCTACCATTGCGAGATCTCTTTCGGCTCTC
CTTGGAGCCACCAGACTTCGGTTGGGTAGACCGGGCGTTAGGAATAGGCACACGATGCTC
ACTAGACAAAGCAGGGAAACCAACGGCAGGGTTTCTGCAAAAAGGAAATGATTGTATTTA
GCACAGCAGAAACGATCAGACCATCTTGCAAGATTATAGCAATCCAGGTTCATTTCATGC
AAACTCTATGTGAACCCATCCAGCTCACTAAGTTAAGCCATTATTTGTAATCAGTGGAAA
CGATCCAATGTCACCAACGGTAGAGATTTTCTGAGTGCAAGAGGGTTGCATAACTCAATA
AGCTTGAATGTATCATATCGATGATTTCAAGTTAGAACATTAGATATACTTGCAGTATAG
GAAGTAATGCACTAGTTATTTGTCAGCATGTTTGAGCAATGAAAACCAATTAGTAAGAGA
ATTTCGTTCATTCAGCTTATGGTGAAGTATATATGTTTGATGCATCTTACCCATAAGTAC
GGCAGACTCCTGCATGACTGTGTGAGCACCAATAGGCCTATCCTTCAACATGTTCTGGCG
CAGTGCCATGTTCTCAGCTGCGCAGCACTGAAGTGCGTAGCTGAGGCGGCGACACTCCGC
CTCGAGATACTTGCTCTTCGTCTCCAAGTCCTTAACATATGACTTTTTCCTCTCCCTCGA
CTTCATGGCAGAATCCCTATTCCTCATTTGCCTGACAAATGAACAAACACCCAACTTGTA
TGAGGCTATACGGCCCAAATAGCCTTGCAATTGAGAACACAAACGTTCCTACTTAAACAA
TAATACTGGATACTTGTCATCTGGTTAAGATTTTTTTTGACTCTAAGACGAATCTTTCAG
CAAGAGAAAATAACATTCCGTTTAACCAAGAGATGTACCAAATGTGACTCTTTTTAGCCA
AGGTCAAACTCCACATGACAACGGACAAGTTATGCAATTATAAAGTTGTAGTGCCCTCAT
TTAATTAAAATTTCTTCCAATGAATAACATTCACCATACAGAACAACACATCTGAAAGCT
TAAGAGATATCCTAAAAAAAACTTATAGTTTGTTGTACAATTTTGTGCATTTTAGTACTA
CTCCGAATTAGGTTAATTATGACAAGGACCCTCCAGATAATTGATCCTTAAGCTGGATGT
AAATTCGTAAGTTCTACGGGCAAACAAGATGACAGACGATATATCGTGCGACAAATAACA
AAATTTGGCATACCTCCTCTTCTTTTTGCTGATGGGATCATCGCCATCAACCTCCGTCTC
CGGCGTCACCACCTCCACCCCCTCTTCATCCCCCCTCCTAGAGTCCCCATCAGTGCTGCC
CCCAGCCTCAGCCTCACTCCCGTTCCCCTTCTCGCCCCCCTCCTCCGCACCGTCGAACAG
GGCGTCGATGAACTCATCCACGCTGATCCCGTCCACCGGCTCCACCCCCGCCGCCTCCTC
CTCCTGCATCAGAAACCTCTCGATCTCCGACAGCGCCTCCT