morexGenes - Barley RNA-seq Database

Contig contig_160043

Source Contig contig_160043

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_160043 (2582 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_160043

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21942	1	299 bp	MLOC_21942.1	Available	Available	None

CDS Structure of MLOC_21942

Contig Sequence (2582 bp)

>contig_160043 2582 assembly3_WGSMorex_rbca.fasta
AGACTACTAGCAAGGGCAACCGACATACAGACACTAGCGCCGCTGCCGGGCAGACAAATC
CCGCTACGAGTTAGCATTTACGCCAATGACGCGGTGATTTTTGCAAACCCCAATAGGCAA
GAGATAGACAGACTATTAGAGATCCTGAGAGATTTTGGGAACATGACTGGACTACGCATT
AACCCAACGAAATCGACTGCATCAGCCGTCCGCTGCAAGGATATAGACCTCCAGGAAGTT
CTGCAAAATTTTGGTGGAGTAATAGTTGACTTCCCTGTCAGATACCTTGGCCTCCCCCTA
ACATTGTCGCAGGTGCGCCTCGTCCACATACAGTTCATCCTAGATAGGATTCGAGCCAGG
CTAGCTGGGTGGAAAGGGAGACTGCTCACAATAGCCAGTAGAAGGGTATTGGTGAGAAAT
GTCCTAACAGCATTACCCACCTTTGCCCTTTCAGTGCTACGAGCACCAAAGAAATTCTTG
CTCGAGATAGACAAGGTTAGACGCCGCTTTCTTTGGGCTCACGAAGAAGAAATCAGTGGA
GGGAAATGCAAGGTAGCATGGCGAGTAGTATGTTCCCCGGTTGAAAATGGGGGACTAGGA
ATACTAGATATGACACGGTTCAGCAGAGCCCTACGCTTGCGTTGGCTATGGCTGTCTTGG
ACAAGCCAAGACAGGCCATGGAATGGCATGCAACTGCCATGCGACGACGATGACATAGCA
CTTTTCCATGCCTCAACGGTGGTCACGATAGGGAATGGCGATCGAACCTCATTTTGGAAT
AGCTCCTGGACAGACTCAGCAAATCTAAGGACGCTATTCCCAAAGCTATATAGCCATACC
CAGAGAAAAACACATCTGTAAAAGAGGCGCTGCAACATCGCAACTGGATTACAGACCTAG
CACACGGAAACACATCAGATAGGATGAGGCAGTTAGGTTAAATAGATGGATCGAGAGCAG
AAATATCCAGCTCCAGCAACAAGTAAATGACACCATCAAATGGAAACACGAGGCCTCAGG
AGTATACACCGCCAGCTCGGCATATAAGGCTCAATTCCAAGGGATCTTTAAGTCTGATAT
CAAGAAACTAGTATGGACCTCCTGGGCACCTGCAAAGTTAAAAGTCTTCACATGGCTTTT
GCTCAAGGACAGACTATGGTGTAACGATCGTCTACAGAGAAGAGGATGGCCGAACAGTTA
CTTCTCCCAGCTATGCCTTAGAGATTTGGAGACATCAAAGCATCTATTCTGGCAATGCCC
GGTAGCAAGATCAATTTGGACTCACGTTGCATCATATATCGGTTGCAACTCCCTAAGCCC
CGACAAATGGCCGAACACAACAGATGCAACAACCATCATGTCTAAAATGATAAGCAACTC
AGTGAAGGAGCACAAGAAAGCAATCAAAACAATGATCATCGTCATACTTGCTGAGATTTG
GAAGGAGCGGAATAACTGCACCTTCAGAAACAAGGAAGCTAAAGTCCAAGACATGAAAGA
AGTAATCACTAAAACCATAACACTCTGGCGCGAAGCAGACGCGACAGCTTTGGAGCACCC
GTTTGGGGAACCACCGTGAAAGATTGTATTAGCCCCCAATTTTTTTGAAGTTTCTTCTTT
TTACTTCCTTGATCATGTGATCGCAACTCCCCCCAGATGTTTTTCTTTCTCCATGTGCTA
TCTGCTATAATTTAAAAGCCAGCGGTTGCTGGATCTTTCAAAAAAAAATATCCACATCCA
CATCTATATATATATCAATATAAAAAAAAACTTATAAGGACAATCCAATCAATTAGGACT
ATTAAACCATACCAATCCAACGACTTAGAATGTTCCAATAGGGAGCGGTCAACATGTTTA
GCATACAATTAACACCACACAAATTCGAACGCATGTGTTAATCACATAATTAACACGTGA
TTGATACACCCTGTAATACAAGCGCGTACTTAGTTTCCTCCCAAATACCAACGTGCATTG
CGCATTGCTAGCGCCAAGTAAACAGCTGATCTGTTCTGTCACTAGAAAAAAAAACATAGT
TGTTCTGTCGCGGGAAAAGAAAGCGTCAACAGAAAATAAACGTGAACACGTGGCCTGCCT
TCTTAAAAAAAGAGAGAACACACACTACAAACAGCCACCATCCTCTTTTTTAGAAAAAAA
AAAAATAGCCACCATCTCGCGTTGAATCGGAGCGCTCACCGCATTTCCAGGATCCTGCAT
CGAATACGGAGATGGTGGCTGTTTTTTTTTTTTGCACGGTCGTACTCTTCTACTCGGATC
GACGCAGCGACCCGTCACTCGCGGGCGCTATTTAAGGCCGGGACCGCAGGACCAGCCCAC
CAGCTCCCCCCACCCCCCGCGCGCGCGCAGTTCGTTCCGCCTCCCACGTCGCACGCTACG
GCCACCTACCACCCGCGACGACCGGACCGGGGGTAGCAGCAGCGCGCGACCAGCCGGGGA
TAGCAGCCAGCAGCCAGCAGCAATGGAGGCGGCGGCGGGAGTCGCGATGCAGTCGCGGGC
GGTCGGGGTCGCCGGAACCGGCTCCTGCGGGCGCCGGAGCGGGGATGGCCGGGCGCGCCC
GG