morexGenes - Barley RNA-seq Database

Contig contig_160028
Source Contig contig_160028
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_160028 (8455 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_160028

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21933	2	2279 bp	MLOC_21933.2	Available	Available	LOC_Os03g12500.1, FRAME:+2, EVALUE:0.0, 13103.m01431 protein cytochrome P450, putative, expressed
CDS Structure of MLOC_21933

Contig Sequence (8455 bp)

>contig_160028 8455 assembly3_WGSMorex_rbca.fasta
TTAATCCTTTCAAGTAACGAGTTCAAGGGGCTTGANNNNNNNNNNNNNNNNGTTGGGTGC
AAGTGTTTGGTTTTGTGCGTGTAGGTCCTCACAATGAAAGTTTGCTCGATTCTCCTACTG
GTTCGATAACCCTGGTTCTCAATGAGGAAAATACTTATCGCTACTATATTTCTTCACCCT
TCCTCTTCGGAGAAAAACACAACGTAGCTGATAGGTAGCAGAAAAAAAATTCGGGTGCCC
TTGCCAGGGAGACATCATCAAATTCTCATCAGGTTTCTTCACACAAATTGTCATTCACTT
GATCTACCTTTTATTTTACTTTATATTTTCTTGCTTGAAAATATCAAAAACACAAAATTA
TATTTCTACTTGTTAGTTTACTTGCTCTGTTGCTATGTCTTAAGAAAACACCAAACTCTA
TGACTTTTCAAATACTAATAATGATGATTTTATTAATACTCTAATACCACCCCACTAGTG
CGGAGTCTTATGATATTAATGCTCATTGCTAAATCTTTTTATGAAAGAACAATTTGTTGA
AAGTCCTAATTAGGATGCTGCTTCACATCTTAACACCTTTGTTGAATTTTGGGACATCCA
AAAGAAAAACAGTGTGCATAATGATGTGGTTAAGTTGAAATTATTTCCTTTCTCGCTAAG
AGTAAAAGCTAAAACTTGGTTTTCATCCTTGCCATGTAATAGTATTGGAACTTGGTTTTC
ATCCTCTGCCTATGCCATGGACAAAGACGCGACTAGCACCACCTTGTTGAGTTTCCGCTG
CACCGCGCGCAGTGCCTCCTCGGCCTGGGCAGTGAGCACAACAACATCGGGCGCACGAGG
TGGTGCATCTTCGTGAGCCACGCATTTTATGTCATAGATGTCAAGGTGCTCCTACATCTC
CTCAAAGGCCGCCTCCTCCTCTAGGTCCCTACGGTTATGAGATAGCTCGGACAGCGTGGG
CTCAATTTCGGAGTAGTTGGAGTAGTTATTGGAGCTCGAGTCATAGTTGGAGCCCGCAAC
CGCTCCAGTGTTGGACGCCGGTGCAGGGAACCGACGCCCTGGGGCAGAGACCCCCCGTGG
ATATCCTTGCGGTCCGTCTCTCCCTCACCATGGCTTTGGATTGTGTGGCGTGTGGAAGCA
ATGAAGTGAAACATTCATGGAAGGATGTCGCACGCTGGTATTTAATCAAAGGAGTGCGGC
CAGTTCAATAGAGGAGGGCAGTGGATGATTGGTGCAGGGAGTTAAACAGAGCACTCCCTC
CATCTTTTCACATTGATTTTTGGTGTGTCGATCGGGAAAACTGCGTGCCCACGGTACATT
AATTGCTCTGATGCGACACAAGTGTGTGGCAGCATGCATGTAGGACATGCTTCTTAGGGT
GCATGCATGGGAGGATGAGACTAGGCCCACGACTGGCATTGTTCCTACGCTTCCACGAGC
GCACTCATGTCCATAGGCACGGAGCAACCGCCCGATGCACCAATCATGCCTCATCTCGCG
GATCAATCATGATAAACCCTAGCGTCTGATCTAAACCGTTCCCGAATGGCGATCCAATGA
CCCTGGTCATGCGGGGTTTTAGGGGTTTGGGGAGGGGTTTGAGAGGAGGTTGGGTTCTAG
GGTTGAGCATAACTAATTTAAAAAAGAAACCACAAATATGGGTATTTTCATCAAATTTCC
TTCATGAACTTAGCTATCACGAACTTGGGTACTTGGTTTTCAAGGGGAATGAGCTAGGTT
TAGGGTTAACCATGGCATAGTTTGTCCAAATGATCCCATATTAGGCATGGACCCTATGTT
TGCACACTAGATGACAAGGGAGGGTGCACAATTAGCTATCACGAACAATGGCGCATAGTT
TGTCGAACTCGATTCTAAATAAAAATGTTGATTTTTATACACACCTTTTTAACTACTAGT
TTATTACCTTCCCATATTTATTTTGATTTCTTTCATACATTTGCTAGACTACTTTAAAAT
TCTTTTTAACATTCCTTTTTTTACAAGATAATATATAACACAAGACAACATAAGCCAAAT
AGACTTTACCAAAATCATACTACAATTCGCATACTACATAACCAAAATATATAACCCGCC
AACAGTTCACAACCGCAAAAGTAAAACATGAGATGATCACGGAGGTCTACTAAACGGGAG
TCAAAGCCTTCGGTAGGGCCGCATGCCCTGATCTTGGCATTCTCCCCACTCTTCGAAGCA
TCCCGTGCATGAGAGAGAAGGTGCTCAAAGAGCCCATCCTTGGGCTTTGGCTTAGTGGTA
CAGTAGGGGCAACATAACTTCTTTCTCTTGTAGTACGCAACCTTTCCCTTGGCCTTGATT
TTCTCGATTTCCTTCCATACGAAGGAGTCAACATTCCCGTCGTCCACATCATCTCCAGAG
GTATACTGCACATAAAAATGAGTTGCACTCATCTAGATATACACGAAAGTCACATTCATC
ATATAGTAAAACAAACAACATTTCAAGTAGGCTTTACCTCATAGAAGTCATCGTCAACAA
AGTCAGGATCATACTCGTTCTTGAACCCAGTCACGACCAGCTTCCTCTTGGTGCCCACAT
GATCATCCTCGGGCAACATGAAAGTCACATTGATCATATTATCCATACTATTAACCTATT
TGCATTTCGCATAGGCATGTGCACAAATTTCACAACATAGCTAATAAAACTATATAGGGG
CCCAACTATATATGGTGGACAACTTTATAATTAGAGAAAATTATAGAAAATAAAAAAAAA
ATCTACCTAAACATTTTGATTTTGTATAATGAAGCAAAGCTCCAATGGCTCCTCTACACA
AGATCAATGCCTCCTCTAAATTATTCTAAAAAGTGTACTTGAAATAAATTGATAGGCGCA
TATAAATTAATGGTCAAATCTACACAAGATTGATTCCTTTTCAATAATAACCAAATCTAC
ACAAGATCAATTCCTTTTCAATAATAACAAAATCTACACAAGATCAATGCTCAAATTTAT
GATCAACTGAAGATGACAGTGAAAAATCTAGTCATGAGAATTAATGAAATCAATTATAAC
AATCCAATTCCAAATATTTATAACTGCCAAGGTGAAATCAAATGGCTTAGCAAGCACGAA
CCTAATACTCCCTTCATCCGGAATTACTTGCCGCAAAAATGGATGTATTTAGAACTAAAA
TACATCTAGATACATACATTCCTCAGACAAGTATTTCCAAATGGAGGGAGTACAAAATAC
CCTCAAAAACTAATCTAACCAAGTATACTAAAGCAGGAATCATAATATAACTAACTAAAA
CTATATTATTAATCTTACCACTACCTATGAAAGCGAAATGAGAAGGAGTAGATCCTCGGC
CACCTGCTTATCGCCGGCATACGCCGCTCGACGCCGAGTCGGAGCCCGCCACCTCCTTCC
CCACCAGATCACCATAACGGCTGCACCTGCAGCTCTAGTGGTGGTTTGAGCATCTCTGGC
ACACTTGTGGACGCACACAACTCCCGCTGCATCTAGCACGGTCCCCGCGAACTTCTCCTC
CAGCACTGCCGTCGGGGTGATGGTTTTGCTTCGGTCCTTCATCGTTGTCGAAAACAACCG
GCCGGATGGAGGGAAGTGTGGTGAGGGTGAGCGAGTGGGTGCGGAGCGGTGGGAAGTGCG
GTGGCAGTGAGGGTTTTGCTACGGAGACGAAGCGATTTGGGGGGAAATGGTGGGGGCGAT
GCGCCCGGTGGTGGCTCCTCTCCTCTTATACAAAGGGGAATTTTTGGACGTTTTCCATTG
ACACGTGCACGTCCACGACCATGCTATGGTGCATGGGAAATCAAAACACCCACATACAAA
TACCAGTATACGGTCATCCTGGGTTTAGGCCTCTATACATGACCAACCAACATCCCACTT
GTCATAGGCTGTAACGACCAGACCCACATGCCATACGCGGCCCACGTGTCTTTCCGACCC
CACACATTAGTAATCGAGGAGGTAACGGTGAACTGCGTTGACCCAATGACAATGCTGGGT
TTGAGATTTTCTGAGAGTAGGGCGAGTGTAGGAGGGAAAAAGTGAGGAATTTTAGACCCC
TTGGGCCAAATTGAGCACAACTAAGGAACCAAGGACACAGAAATAGAAAACCCCAATAAG
AATGCTCATGTTGATCCCAATGGTGTGCCATTATCTACTTTGACTGAGCAAAATCATGAT
GCTATCGATGTGAACTTTGTCTCTAGGAATAATTTCAACAACAATGCTTATAGAGAGAAT
TTCAATCCTAGACTGTACACCGACAATTCCTCTAATAATTATGATAATTTCTATGGTAAT
TCATCTAAAAATAATAGTAGGATGTCCTCTGATCTTGAGAACGCCGTTAAAGAATTTATT
AGTTCTCAAACAATTTTCAACACTATGGTAGAATAAAAACTACATAAAGTTGACGATATG
GCTAAAAACATGGAAATGATTGCACATGATGTGGATACACTTAAAGTAAAATTTCGCCAC
CTAAGCATGATATTAATGAGTCCATTAAATCTATTCAAATCTCTATTAGTGAAACTAAAT
AGAGGACCACTATATTAGAGCTAAGCACGAATTCTTATTAAAGGCTCTTCCACCCGGTTT
ATATCATAATCATGATGAAGATGTTAAAATAATTGGTGTTTCTCCTACTGAATCTTTGTT
TAGTAATCTAAAAGTTGATGGAAAAGGTACCGAAGATTAGTCATCTTTAGCTAGAAGACG
TCCCGATTATTTGGAGGGTGATAATCCTAATGATAAAACTGGAAAAGGTGGGTTTGGAGA
GGTCAATACTTTACATAGTAATGCACCCACTACTTTGGATTATAAGGACTTTAATTATGA
AAGTTGTTCTTTGGTTGAATGTATTTTCTTGTTTTAATCCATGATTAGTTCACATCATGC
TTATGAGCAATATAAATCTTTTACTAAACATATTATAGAAGCTATGATATAAGCTCATGA
TGAGAAACTTGAATTAAAGGTGTGAATACCTAGGAATTGCATGATTAATGAAAACACACT
ATTAAAATTAAGCTTAAAGATTACAAATGTAATGTTTTGTGTGACCTTAGTGCTAGCGCT
TGTGACTAGTCGGCTCTCAAATTTGCTTGTTTACATTCAACTTCCTCATATTTCAACCCC
TAAATTCATACAGAATCATTCAAAAAAAATGTACTACGTACTATCCTATTCTTCATCGTC
GTCGGCCGCAGCGTGAGTCGCCTCCACCATAGCCTGTGGCGTCTTCATCTGCTGCCGACG
AAGACGTCTAGCCTTTGCCGTAGAATCCGAGCGGATGGAGTTCAGGATGGTATGCTGCTC
TGCCCGCAGATCCACGTCCTCCGCCATCGTCGACGCCTCCTCCTCCCCAACATCCAGCGT
CAGCGCCTCCTCCGCAGGCTCCTGCTCCTCCTCCTCTTCCTCCTTCACCTTCTCCTCCTC
TTCCTCCTCCACCTTCTCGTCCTTGAAAACCTCCATCGAATCCAAAGGTAGCCCCGCGGC
CCTCCGGAACCGGACCTACTCAAGGAGCTAGAGCCGGTGCTGCACCGTGTAGTGGCGGTG
GCGTGAGGGCATGGCTGATGGCTACGATGAACGAGAGGAGGAAAGTGTGAAGGGTAGGAT
TTGAGTACCGGCGGTTAGGATATTATACGGTTCGTCGATGCGGCGCCACGCGGCATTCGC
ACTACGATGACGGAGGAGGCGTCCCTCCGACCGCTGAATTTTGGGATGATTTTGCATGGA
CCCATGGGTCCATGCCGTGAGGTTGATGTGGCGGACGTGTCCGATCGCGCTGTGGCTCTT
CATATTCATTTCATATTTGAGGTCAATATGAAGTATGCCTCACAGAACCCGACTTAAGAG
CCCGGTTAGGTTGAAATTACGTGATATATCGAGGCGTTTAACAGGGATACGAGCACCGCC
CGCCTAGTGGTTAAGTGAACGGTGCAAACAGGTATTGATCCCGTTAAAATATTTCTTCGT
CCCACCCCTAGTAGAAAGATTATATATCTCCGTGCCGGACTTGTCGATTGGCCCACCCCG
CACGACACGCGGAACACGCGCGCACATGCGGTCCTGGCCCCCTGCCACGCCAGCCATGCA
GGCTGCATAGTCGCTCGATCGATCTCCGCGGGCTATTTGTATGCCCAACGAGCCGCATTC
CAATCGCAACACACACACACACACACAAAGCCTCCTCGCTCCAATCTTGTCTGCATCGAG
AGCGCGAGATCCAAAGTTCCAAACCCAACCAGCCTAGCTAGCAGCAGAGTTAGATGAACC
AGAGCGGCATGGCGCGCAGCGACGAGGGCTCCCTGGTGCCGCGGGAGGTGCCGGGCAGCT
ACGGCCTGCCGTTCGTCTCGGCCATCCGCGACCGCCTCGACTTCTACTACTTCCAGGGCC
AGGACAAGTACTTCGAGTCCCGCGTCGAGAAGTACGGCTCCACCGTCGTCCGCATCAACG
TGCCGCCGGGCCCCTTCATGGCGCGCGACCCCCGCGTGGTCGCCGTGCTCGACGCCAAGA
GCTTCCCCGTGCTCTTCGACGTCACCAAGGTCGAGAAGAAGAACCTCTTCACCGGCACCT
ACATGCCCTCCACCTCCCTCACCGGCGGCTTCCGCGTCTGCTCCTACCTCGACCCCTCCG
AGCCCACCCACACCAAGGTCAAGCAGCTGCTCTTCTCCCTCCTCGCCTCGCGCAAGGACG
CCTTCATCCCGGCCTTCCGCTCCCACTTCTCCTCGCTGCTCGCCACCGTCGAGTCGCAGC
TCCTTCTCAGCGGCAAGTCCAACTTCAACACGCTCAACGACGCCACCTCCTTCGAGTTCA
TCGGCGACGCCTACTTCGGCGTGCTCCCCTCCGCCTCAGACCTCGGCACCACCGGCCCGG
CCAAGGCCGCCAAGTGGCTCATATTCCAGCTCCACCCGCTCGTCACGCTCGGCCTCCCCA
TGATCCTCGAGGAGCCGCTCCTCCACACCGTGCACCTCCCGCCCTTCCTCGTCAGCGGCG
ACTACAAGGCGCTGTACAAGTACTTCTTCGCCGCCGCGACCAAGGCGCTCGACACCGCCG
AGGGCCTCGGGCTGAAGCGGGACGAGGCGTGCCACAACCTGCTGTTCGCCACCGTCTTCA
ACAGCTACGGCGGCCTCAAGGTGCTGCTCCCGGGGATCCTCGCGCGCATCGCCGACTCCG
GAGAGAAGTTCCACAAGAAGCTCGTCACGGAGATACGCGCCGCCGTGGCGGAGGCCGGCG
GCAAGGTGACGATAGAGGCGCTGGAGAAGATGGAGCTGACCAAGTCGGCGGTGTGGGAGG
CGCTGCGTCTGGACCCGCCCGTCAAGTTCCAGTACGGCCGCGCCAAGGCGGACATGAACA
TCGAGAGCCACGACGCGGTGTTCGCCGTGAAGAAGGGGGAGATGCTGTTCGGGTACCAGC
CGTGTGCCACAAAGGACCCCCGGGTGTTCGGCCCCACGGCGAGGGAGTTCGTCGGCGACC
GGTTCGTCGGGAAGGAGGGGAGCAAGCTGCTGAAGTACGTGTACTGGTCGAACGGGCGGG
AGACCGAGAGCCCCAGCGTGCACAACAAGCAGTGCCCAGGCAAGAACCTGGTCGTGCTCG
TCGGCCGGCTCCTGGTGGTGGAGCTGTTCCTCCGGTACGACACCTTCACGGCCAAAGTCG
GCCTCGACCTTCTCGGCACCAAGGTTGAGTTCACCGGCGTCACCAAGGCAACGTCCGGTG
TGGCAGACGCTGTTTAAATCCTTCACCGGACGGCCATCGGTGACAAAGGGATCAACGCAG
GGCAGCAACGATCCTTACACCGTCATCACGTACGTACGTACGTGCCTCGCTATATCTACC
TTAGTAGTGTACGTACGAGTCAGTCATGCATGTGCATGCATCTTGTTCGGTTGCTTCGCA
GCATTGTGCCCTCGTGTATGTGTGCGTGTGTTGTGTTTACTTTTGGCAATCTTGCCCAGT
GTAATAAGCCGGACTTTTCTACAATAAGATTCCCCCTTTTGGCGTACGGTAAAAGGGATG
ACCATGTGGTAAGTCAAAGTCAGAGGCCTCTCTTTTGTACACATACGCAACGCAGGCTTG
CATTCACAGCCACTCACCCGTAGAAACCTAGAGTAGAGCGGCACGATCCATGAGAAAGAA
TCGGCGCGAGGTTCCTCGCATCCTAGGCAAGATTTGATTCCGCGTAGATCACCGGGGCTA
AGAGGAAGATGAGGGGAACCAGTGGCCTCCTCCTACCAGCTAAACGATTGACGTAATTAC
TTGATGCGTTTTGATTAACAGTTATGCTAAATCTTAGTCGACTGAGGCACTTAGGCTGGT
CACAATGGGGAGTAACATAAGGTAGAAACCTACACACTTTTCTAGACTATGTTCCTACCT
CCACAATGGGGAGTAACATATATGTAGTGTCATGCAACAATGCATTTATTAGGCT