Contig Data
morexGenes
Links



Map Locations of contig_160014 (3798 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_160014

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21916 1 389 bp MLOC_21916.1 Available Available LOC_Os01g61360.1, FRAME:-2, EVALUE:1e-11, 13101.m06530 protein DEFL4 - Defensin and Defensin-like DEFL family





CDS Structure of MLOC_21916






Contig Sequence (3798 bp)

>contig_160014 3798 assembly3_WGSMorex_rbca.fasta
CTCCGTTCCTAAATATAAGTCTATATTTCACTAGGAGTCTACATACGNNNNNAAATGAGT
GAATCTACATTTTAAAGTATGTCTATATATATTTATATGTAGTCCACTAATAAAACCTTT
TTAAAAAATTATATTTAGGAACGGAGGAAGTACTAAGGTGCATGTCTAGTGATAATCTAG
TGATGGTCTTAAAAGTCCTAAATACTTGTGAAAAGGCCAAGGTTAACAGTTTGTGTACTC
TCGAAAAAAGGCCAATCCTACATGGCTGCCGGTATGCCAATGATGGTCATAATAAGTGCT
AAAAAACATCGACCTTAACAACTAACAGCTTTGTCCAAACACGTAAGGGCATCTCAAGGC
CATATAAAACCCCCGTGTTGTAAGAAGTTCTTAAACTTCCCTGAAGTAGTATGCGGACTT
ATCAATTTGATCACTAAATTTTTGTGTATGTCTCTCTCAGTGAATTAGATCTCTCTCAAT
GAATTAGATGTTTCATTGCCTACCCCACCTCAAATAAATAAATAAATAAAAAATCCTAAC
TCCGTCCGCAAGGGTGCCCCAAGGCTTCAATTGGCCAAGGGTGGGGCATGCCCCAAGGCT
TCAATTGACCAATGAGATTTGGCGATTCGAGGATACCCCCTCCACATACACACACATCAA
ACTGAGGTGATGCTTGACCAACTATGCATATTTAGGATGGACGTGAACATTTTTGTGGTG
CAATGGTTCACTGTGATGCATTTTTTAAATGAATTGATGATGGATATGATCCACAATGGT
CAAGTACCTCCAATATATGACGTTGGTGATCAAAATGCGCTAATGAATGATGTTGGGCAA
CCATCTCAAACCAAGGTGGCGAAGTGAGGAAGTGCATAAACCTGGAAGGAAGATGTGTTG
GTTTGCACCGCTTGTTTTTTTAACACAGTACAATCAACGACGCTCACATGCACGCACATA
CACTCAATCACACATGCACACACTATCCCTATGAGTATCTACGAAATAATGAGCCGCCAC
AACATCTTAAAATTGACGAAGTCATCAAAGGCGCCTTGTAGTCGATAGTAACATCTTCGA
GTGAACGAACATCGTCGAAAAGACAGAAATAAATCCTGAAAAATGCATATACTAGTGTCA
AGTCAAGGACTTAAACCCCTGGTGGGCTGGTTCCATCACAAGGAACCTAACCATCTTGGC
TACGCTTAGTTCACTTCGGCACCACTTGTTTGCAGGTGAGCATGGATCCAATATGTGGAA
CATAGCAAAAGAGTTAAAAATATTGGATGAAAAATCATGACTACCGCCATGAGTTCAAAA
ATACCCACCAACATCCGATCACAAGTCATCACAATGAGAACTCGCTCACTCATAGTTGGT
ATGCCATCCAAGAATCTGTCAATAATGGTTTGGTGCATTTACGCAAGTGACAAATAAAAA
CCCAAGTGACACGGGAGTCAAAAGCCATGCGCCCCCACTTTACATTGATCATTATGTTTT
TCTTTCTTTATATGTTGAAATATGTTGATTTGTGGTTTGTTTGATAACTGAGCATGGCAG
TGACATTGTGCCAACAAAATGAGGGGAGGCCATTTGGACCGTCACATTGTTGGATGAAGT
CGAATGCCATAAGTAAATGGAGTCAACTTTTTGGAGCACTCAATAAACCCACAAGAAGCA
AAAAAACAAAAAACAAATGATGGCTCAAACTCCCAGAATAAACCGCCGTCCATTTTCAGG
TCATTTGGAGTTCCAAAGAATACCCAACTCTTCCGTAGCCCTTTTCGGTCAAGAATTCCA
ACTATCGACAATCTCTCTCTTTGTATAAATCTTGTGAAATAAAAGAGAAAAGGCATTAGG
ATTGCATCATAAAGTAAAATAATAACTGAAAACACAAAAATATCAACGGGAAAACATGAT
GCAAAATGGACGTATCAGAATGTTGCGGTTCCCTACACTTGTAGGTTATGAGAGGGCACT
CATACCGCATTCATCATATCCTGATTCACCAATAGCAGCCGCCCCTAACCCTAATAGGAC
TTTCGGTTTCAAGTCTGTCCTAATATCACCATCAACTATCGAAGATATGTTATAAACTAC
ATGGTTGAAACAACCCATTTCCCAATTGTATGAAGTAGGAATCATGTGCAAAACAACACT
AAAAAATAAGTGTTGTAATGTCTCCTCTATCTGACAAAAGTAACAGTCCCTATTGCCTCA
ATTTTGCTCATCTAATTATAAGACGTGTTAAAGATAAACATATATTTAGTACTATTTTAT
TATGAAAACCCTCACAGTTTGCGTGAGTCACTTTCTAGTTGCTAATAACCAGATGAGTGT
ACAACCAATGCAACATGCTCGGACACACATCCGGGGATTACTATCAAGGATCGAGTGCTC
TCGTAGGAGCGCATTTTGGGCGCAAGCACTCGCACAAGGGCAACAAATAAGGAAATGCCC
ACCAGCATCGCCCGTTAACGTAGTGGTGCTCCATGCAAGCTCTCCTACATTTGGCAGTCC
TCATGCAATAGTAGTAGTAGTCACGACTTAGAACCCAACATTCATCTGCTCCAAGTCCAA
CTCCAACTCCAAGCACATGCAACACCAGCCCTATAGATGCAGGTTGTGAGTGAATTGTAC
CTAGCTATGTGGTGTAGTGCAGTGGCATGAATCATTGAAGTGAACCATGAATACTTCCGC
GAGTGAGAGTGCTTTACCACAGGATGTTAGAAGTAGCCATAGGAGGAAGCCAGAAGTCGC
CACCTTCATTGCTATTCCCGTATCTAGCATATGTATTTAGAAGGCTCTAAGGTGGTGGCT
ATTTTATACATGGTGCGGAAACAAGGGCGTCCCTGACAAAAAATCTGAACACAAAGAGGA
TTCACATCATCCAATGGTTGCCTCAAATGAAGAAAAATACATAAGATATGCAAGCGGCGC
AAACAAAAACAAAAGATATTCAAGGCTCTTGGGTATTCAAGGGCAAAATAAATATTGCCT
TATCTACATCCTTAAGGTCTATCCCAGTGCATCATATCCTAAGCTTGTATCTCAAGCATT
AATAAGTGTTCACACACAACTCCACTAACACATTTATTGTATCTTTGTCTTGTATCTAAA
GAAACATATGTTTCATATGTTTTGGGATCAATACTAATGTCTTAACCATGTGGCCCATTT
GTGGAAAGGCATACAACTAACTTAGTTTGTAAAACCCGGCTCAACTATTTTTCCCATTGG
TTACAATATCCATCAATAGAAAAACTTCTAGAGACCATTTTGGAGAATAATAAATATATA
TTATGCATCAATTTGTAAGTAATTATCTAGTAGACAAAAGAGTTGCATGAACCATGGCAA
GCCAATGTGCATGCCCGATGGCCAAAACTTAATCTCGAAAACATAAAATTTGAAACCTTA
ATATGTAAATCAACGTCAACATATTAGCGTTACATAATAGTGTTGGAAATATGCCCNNNN
NNNNNNNNNAAATTGGTTATTATTATATCTCCTTTTTCATGATAATCATTTATTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACAACACACTGT
TCCTAGTGAGCCCCTGGAGGACTAGCTCGTTGATCAAATATGGNNAAGGTTTCCTGGCCA
TAGACATGAGACGTTGTTTGATAACGGGATCGCGTGATCGTGTCAGTTTACTTATACTAT
TTTCTGCATGTCAAAGTATGTGTTCCCATGACCATGAGATCATTCAAGTCCCAGACGCCG
TAGGAATACCTTGTGTGT