Contig Data
morexGenes
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Map Locations of contig_159980 (5390 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159980

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21877 1 1900 bp AK361510 Available Available None
MLOC_21878 1 1198 bp MLOC_21878.1 Available Available None





CDS Structure of MLOC_21877






CDS Structure of MLOC_21878






Contig Sequence (5390 bp)

>contig_159980 5390 assembly3_WGSMorex_rbca.fasta
CAACAATGTGAAGAAGGCTGAAGCTACCGCTCCTTCAGCTGGGCCTGCCAACAATGTGAA
GAAGGCTGAAGCCACCGCTCCTTCAGCTGGGCCTGCCAACAATGTGAAGAAGGCTGAAGC
TATGGTTCCTTCAGTTAAGCCTGCCAACAATGTGAAGAAGCCTGAAGCTAAGGTTCCTTC
ACCTGGGCCTGTCAACAATGTGAAGAAGGCTGAAGCTATGGTTCCTTCACCCGGGCCTGT
GAACAAGGTTGAAGCTGCGGCTCCTTCACCCGGGCCTGCCAACGATGTAAAGAAGACTGA
ATCTGTGGTTCCTTCAGTTGCGCCTATCAAGAGCATTAGCAGTTCAACGCCAATTGCTGG
GTCAGGGCCGCACCATGTTGGTCTCAGATGTACAGAAAGCAGCGGTTCAGCTATGTTAGT
AACTGAGAATGGAAGTGCAGGTGCTGATGCACCTATTATTGCAGCTCCAGCAGATGAGTC
TGTCACAAGTTCAAATGAGGAGAATAAGCCTTTGCTTCCTCACGGTTTGAAGAATACTGG
AAATATATGCTTCCTAAATGCAACTTTGCAGGCTTTCCTTTCATGCTTTCCTTTTGTTCA
GCTTGTACAAGACCTGAAGAACCGGAATATACCCAAGGTACTACTACCTAAATGAATCAG
TTTCATGTCCTCTCTGCTGATTTCATTGGCTTTTGTTCTGACTACTGCTAATTTTAGGCT
GGCTACCCTACTCTGAGCGCGTTCATTGAGCTCGTCTCTCAGTTTGATGTACTTGATGAG
TCCACTATGAAGAAAGACGAGAGGTTTGCTTTAGTCGCTGCAAAAGTAATCAATCCTACC
ATGTTTGATCAAGTTCTGAGAAATTTTACTCCAGATGTACCGGCTGGAACATCTGCTCGG
CCAAGGTAAGTTGACACTGTTCTTGGTTATTAATTGTGAAATTAATGAAATGTGACGCTA
ATTGATTGGCTGTCATAGGTACTACTAGAAAATAACATACTTTTTTTCCTGTTTGTGCAT
ATTTTTAGCATCTTTTTGTATAGCAAGACACTGATCCCATCAGTATCATCATGTATCCTG
TTTGTCCTTTCTTAGAAACCAAATTTGGCATTGAAACTATAATAATGCTTATGAGCATGA
TGACTTGCACTTAGAATCAGAAGCTTCCCAGTAACATCTTATTCTTGAAACTTGCGGAAA
ATGAAACTGAGATAGATACCATCTTAGCTTGAAATTTGTTCAAACATTGAATGCATGGAC
ATTATGCATGTCGCTTTGATTTTGTGTTACTGTAAATATCATGTGTTAAAATTTGATTTT
CCTAGTAACAGGGCTTCGTAATTCAGTTTATGATGCTTTGCATTTCTACAGACAAGAAGA
TGCCCAAGAGTTTCTAAGTTTTGCCATGGATAGAATGCATGATGAACTGTTGAGGCTTAA
TGGCAATGGTTTAAATTCAAAGGAAGGTATGGTTGTTTCTTCTGATGATGACGATGCCTG
GGAGACTGTAGGTAGGAAGAACAAATCTGCAATCATGAGAACGCAGAGTTTTGTCCCCTC
CGATCTAAGTGCTATTTTTGGAGGCAAGCTGCAAAGTGTAGTGAAAGCTGCAGGTAACTA
TTTCTTATGCTGAGAAATTTCAGTTCTTTCCTCTTAACTCGGATTTATCAACTAGATGCC
CTTTTGGGAAGGTTTTGTCGTCCTGATTCTAGCTATATTTGTGCTTATCTAAAGTTTTCC
CTGGAAATACTACTACCTTAGCTTATAATAGAAATGATGTTTCTTAAGCATGCAGAAGCG
CTGTCAAGGAAAAGACATATTTGCTTATCCTTGAACTTTAAATAAAGGAAAATGACAAGT
GCCACACGTGTGGCATGAAGCACTCCAGCCCTGGCATGTTTTGCAACTAAATTTGCCATC
CGAAAAGAAAAAACAAACCCAAAGAAAAATTGAAACTTGCCATCCGAAAATGAAGTTGCC
ATGCTTTACAACTAAAGTTGCCATCCTCGCGTCACTAAACTTGCCATCCTCGCGTCACTA
AACTTGCCATAAAAAACGTTCGGAGTAGCTATGTTTTCGTGTCACACGGGCAGCATTTAT
CAGGGTCCTAAATATAAACACGTCAACTGTTCATTTGTGCTGAGAAGTTTCTTGTCATTG
TTGTCAGAAATCTTGCATTAGATTCGTGTCGGTTATCTGAAGCAAATTCTCACTGTAAAT
TGAAATCATTAGCGTTGTTTGGCAAAAATTTAGGTAGTTTCAGTTATGCAGTTTCTTTGC
CCTCATGTTGTGTCTTCTTTTTGGATCTATTATAGGTAACAAAGCGTCAGCAACCGTTCA
GCCTTTCCTGCTGCTCCATCTTGATATATTTCCAGATGCTGTTCAAACGCTTGATGATGC
ACTTCATCTGTTTTCCACCCCCGAATCTTTGGAAGGATACAGAACAACTGCTGGAAAGGT
TCTTACTGAAATCTGAGCTCAGTAGTTTTAACTCCTGAATTTTACAATTACTTAGCTCGT
CAGAGAATTTGCTTACATTATTTCAGAGTTATATTACATATAAGGGACACATGCATTCTG
CATTAGCGCCATTCATCTCCGATGCATTATAGACTACCTGATTAGTTGGTTGGTTGTCTT
CTTTGATTTAAATCTTAGTGTTCTGTTGATACCGCTATAAGCTAAAACTAGGTTGTTGAA
CTATACCTCTGTACTATATACACCTCCTCAGTATAACAGTATGGTTAACTTCAGAATTAT
TTTCCTTTTGAAATCAGCTATAGTATTGACTGATGATACATGATTTTGCAGGCCGGAGTG
GTGACAGCTAGGAAATCATTCAAGATACACGAACTTTCGAAGATAATGATACTGCATTTG
AAGAGATTCAGTTATGGAAATCGTGGGTGTACTAAACTGTACAAGCCACTCCACTTCCCT
CTTGAACTCGTCCTTAATCGGGACCTGCTGAGCTCACCATCATCAGAGGTGATAATTTCC
TTGATACTCTATTTTATTATTGCCAATATAGTTGGGTGTATCTACTATTTGGTCAATTAT
ACTTTTGTCTTCTCTTCTTTATCCTTGATCCTGTTGCTTGTGGGACTAGACTTCTTTATA
CTCCCTCCCTTCACAAATATAAGATGTTTTGGATATTTCAATATGAACTACTGTACATAC
GGACTGAACTGATTGATCACACACACTAAAACGTGTCTATATACATNNNNNNNNAAAAAA
AAGTTAGAACATCTTATATACATCTATCCAGAAAAAGGTCAGAACATCTTATATTTGTGA
AAGGAGGGAGTAAGTTTGTACGACCTTTTGTAAAGTCAGATGTAACAGCTATTTATTGGA
TACACTTTGATCACTTGATCTAACATTTTGCCTTTGGTGGAGTGCAGGGTAGAAGATACG
AGCTCGTTGCAACCATCACTCATCATGGGAGTGGCCCGGCCAGGGGCCATTACACCGCTG
ATGCCAAGCGTGACGGTGGGCAGTGGCTTCGGTTCGATGATGGACATGTCATGCCCATCC
ATGTGAACAAGGTCTTGCACAACCCAGCATATATCCTGTTCTACAAGCAAGTGTAAGTCT
GGGGTTGCCATGTGGTTGATCATCTTATTGCTGGACCAGTCAAGTCATACTGTCTAACTA
TCGTTGTGTTAATGGTAGCTCGCAGAGTCGAGTGTGTCAAGTACCCTGGTTGGTTGCGTG
ACTCTATTTATATATATATGCCTGGTAATGTAGTGATGAGGGGGGTGGGCTTTCCCGCTC
AGCCCATTTTTGAGGTCCTGTAAAATGCACCTGCTCATCTTGGTAACCATGAGGTTGCTA
TTCATCCCGACATCCTGTGTGCTGGTGTTATGTTATGGCGATGTGATGTGATGTGCACAA
TTCTCTACATTTTAGGCGACCTAATTGAAAGTTTCCAGTCTTCGGTTTGGCGCACTCATG
ATTGGATGACCGACCATGTGCCATGTCTTCTGGAATCTTTGGTCAATTTCGCAAGCTTGA
AATCATTTCCTTTCCAAGGTTTTGAACCCAGGTCATGACTTCAAGTCGAGCATCTAGCAT
GATTTGTTTTGTTGGCAAATGCTCGCCTTTCTATCAAAAAAGAAAAAATGTCTGCCTCCC
GCGATGCCCAAAATCATATGTTTCTTATCTATATCTCCTGATTGGTATTTTTCAGCCAAT
AATGCTTGACCTAAAAAGAAATACATACATTTTACTTAACTTTCCAAACTATAATTCTCT
TCCCTCCCTGAACTCAACTTGGGTGGGCCCCTTAATCCCCACATCAGCTTCTTTGTAAGT
AATATAAGTAATGTTTTGTATATGTGAAGTCAAGTGTTTTATGGAATATGCGGCAAGTAT
AGAGGACTTTGAACGACGACCTACTGAATTCGTCTTCTCCATACGTGTAGTCCACTACCC
ATTCAAACTAGTATCCACTTGCGCTGTCCATAATTCTGTTCTTGGCTTCGTGGATTGACT
TTGGTTCCTTCCGCTTCAGAAACCACGCATGTGCATCTCTTGCTGCATCCTAACAAATTG
CCGAGCTAATTTTGGTGTCAGATGATCCAGCCACATGCCTGTATTTTCAAGCTGCCATGC
TTGTGATGCAACCTTTCAATTGCAGAAAAGATTGTTGTTAAACCCCTGGTGCCTGCAGAG
ATCGATCTAAAATCAGCTTCTTGTCTGCCCCTACCACCTGTTGTACACAGGTATCTTGCT
CAATAAAGTTGATCTCCACAAATGGCATGCCCTCTCCCTTATGAACAAAAACACAGTGGT
ATCTGCTGGATACCTCCCAGTTTAAGCTCTTGACGATCAAATCAGACAAAGGGATCTCTC
TCAGGCAACTTTTTGGTCGATCTATATCTCTCGGACACCGCCTTGATCTATAACTTCCAT
TAGAAGGTCTCCATGGCAAAATCAGCCAAAGTGCCTTCTCGGTCAATCGCTTCCATTTCA
ACCTCTTGATGGCAAGATCAGACGTTTCCACCACCATCAACTATTCAACACCATCACAAA
CAGTGAAGAATCATGCACAAAATCAGAACCAAAGACAGTGGAAGGCAAAGAGAGAAGCAC
TTGAGAAAAGGTCTAGCGTTGGACCTGATTACCATCTCATCATAGATTACATTTTTTTGT
TTTCTTGCTTTTGTTCTTGACGCGTTTCTGAACACAGGAGGAGAGGGGCTACAAGGGAAG
GGAAGGGGGGAGCACTAGCTAGCAAGCAGGGGCCTGCACTTTGTTTTCCCCTTCATTTTT
CAGCTGTATACACAGAAGCAGGGAGAGACTAAGACTGACTGACTGAACCCAACTGAAGGT
TACACTACACAGCGGCAGCAGCAGCAGCAGCGCCCGTTTAGCTCTAGCGA