Contig Data
morexGenes
Links



Map Locations of contig_159915 (4460 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159915

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21822 1 1972 bp AK250289.1 Available Available None





CDS Structure of MLOC_21822






Contig Sequence (4460 bp)

>contig_159915 4460 assembly3_WGSMorex_rbca.fasta
TTAATAACCTCTTGGAGATTGGTTTAGCGATTGCTAAGGCGCAACTCGTGCACGTTTGTA
GTCGGATCGTNAAAGTCGTCTCCACCAAATCGATAATTATCATCTCATCAAAAGATCGGG
ACGTCCTCGCCTCTATCAACTCCTCCATGCGATCAATCTCCGGCATGCCCTTGATCGTGC
CCTTTGTGGACATGGCACGGAGCACCCGGAAGTGAAGGTGACGCATGCGAGCATGCCAAT
GCTAGGTCATGCCGTCGCTCTTCCAGAGCAAGCAGGTGGGCATGTCGACGGTGAGCACGT
TGGTGTACAGACGTGTCGCGGTGCGCTTGACGCGGGCAAGGACGCGACGCGCTGCATCCT
GGATCGTCATGACGCCATCTCTGATGCTGACAGCGCAGCCGCCCTCGTCGAGCAGGCCCA
CAGAAATTATGTTACTCCGTAGGTTTGGGATTTAGAATACCTCGATGAGCGCGCGCTGAT
CCCCGCTCTGGCCGCGGAAGCGCGGAACACGACGGAGCGACGTCCGCGTATCGCTACGGT
CGATCCGTCCCCGAACTTGACAGTGCCACGCACGGTCTCGTCCAGCGTCATGAACATGTG
TCGCTCGCCGGTGATGTGGCTGCTTGCCCCTGTGTCTTACTACCACACGCTGTCCGACGA
TAGCACAGGGAAGAGCTTCTCCTTGTTGAGGAAGACGGCCCGCGACGCGACGATGTAGGT
CGTGGTGACGCTGGTGACCACGACCATAAACAAGCCCTGGTTGTGCTCGTTATCGGCACA
CACGAGGTTCGCCTGCTCTTGCTTGCCCGCCTTCTCCTGTTCCCGTAGCCAAGTCCTGCA
TTCTTTCTTCCAGTGGCCCCAGGATGCCATAGTGGTGACATTTTCCTTTCTTTCTCTTGC
TGCCGGAGCCGCCTGATCCGCCCGCGCCGTCTTGAGCCTACGCAGGTTTTCCGTCGCCCG
ACTGTTTTGGCTTGCCAAGAGATTTTCCCTTTTCGTCGCCGCCTCCGTCGGAAGATGATC
CGCCCGTCCGCTACTGATTGCGAACGTTCCATTCTCCTCGGTCATGAGGAGGCGGCCGGT
GGCGCTGCTCAGATCGTCGAGGTCGTAGTTGTCCTCGCGCGCCGACAGGCGTCCGATGAG
CTCCTCGATCGACAGGGTTTTCAAATCAAGGAGCTACTCGATCGCCATGGCCATCTGACG
GTACTTCCTCGACACAGCCCGGAGGAACTTATGCACCGCCTTGTGCTCAGTCACAAGGTC
GCCGTACAGCTCGAGGTCGCTGGCGATCCCCGACGATCCCCGTTAACCACAGTGCAAAAT
CCTCAATGGACTCGCTGTCCTTGAACCGGAGTTCCTCGACCTCACAGCAACACACCTGTG
CCAGGTGCTTTGGCTTCACGGATGCGTTCGCTGCCCATCCGCAAGGTCCCGATCGTTTCC
CAGACGGTCTTGGCGGGTGGTGTCTTTGCCGCCAGAACACGCATCAGCTCCCGCGGCACG
TTGGTGAGGATGACGGACAGTGTGTGCCGTGTGCTGATCGTCGCGCTCGTCGTTGGTGCC
GATGTTCACAAGGACCATTCCATGTAATTTGTGTGTGTGGGCATTATCGACGTCCCTGAC
TCCTCACGCACGACGTCCCTGACTCCTCACGCACGACACGCGTGAGCATCATGGACGTCC
CTGACTCCTCGCGCACGACTCGCTTCACCACGCGGAACTCGCCGCTGCCGGTAAGGCGCG
TGAGCGGTGCCATGGGCGACAGCGTCTTCGTTCCATCCTCCTCCGACTCCGAGTCCAACA
TGACTACACTGAATCAAACACCACTCTGATCAACCAGGCGCGAGATCGAACACCCGTCAA
TTGTAGAATTGTAGTTGCCGGAATCGCTACTGGAGCCAGGAGACTCGAGAGTTCCACAGA
GAAACAGCGGAGGAAGCCAGAGTTTGTTTTTGTGCTGCCAACGTCACAGCATCTCTATTA
TTATCTTCTGCTATAAGTAATTGGTTATAGCAGGGAACGACTAGCTAACTACCTCCTGAC
CAGCCGGCTATGATCCGATTCTGCCGCGCCATCCCAAGGCCTCTTAGCGCAGCTTCTGCT
GATCAGGAGAACTGGTAAAACGTGAGATCGTGTGCAGCATGCATCCCGCCCACTCTAGCT
ACTCGCACGCGCCACATGCGGCGTACGTTATTAACAGTACGTTATTAACAGAAAGCAAAT
AAACTAAACAACGTGGTAATAGAGATTATCAGAGGCTAACATAGTGGAATCTTTAAAAGA
CTTATATTTAGGAACAGAGGGAGTGTTTTCCATTTCAGGTACAGGTACGAATAAATGTGG
AATGCTTATAGTAGATGCCTTCAATATACAAACATAGCACATGTATAGACAACGAAAAGC
AATAATACATTGAATTGCATCATATAAATCACAAGGATGCAGGACAAGCGGTCTATCTAT
GTACAGCATCAGTCATAAACTGAGCCGAGCTGAGAGAAGATGAGGGCACAAGAGCAAACT
TTACCAGTTGGGTTGTGACTTTCTGATTGTATGTCAAAATTACTCTCCAACGGCAAAAAA
GTTGGGTTCTGCCGGCTTCTGCAACAACCTTGCAGGCACCCTTTCCTGCAAACGGGCCTT
TCGGGTAGCATTTCTCCGTAAGATCCGCATCATGTTGCCAGCAAAACGCGAGGCGTACAG
TGCCGCTCCCAGACTGAGCTTGGTAGAGTCGTCACTTACAATAGCTGCTTGTAACCTCTT
CTCCTTCTCAAACAAAGAATCCTCCAGCTTCTTCCTGCAATATCTGTGCCAAGCTGCCTG
TATAAAACAAGCGGCCCAGGTTCTCCACTGTTGTGAGTAGAATCTAAAGGTATGCTGGAG
CTGTTTGCTATGGAGTTTCCTGAACTGGGTGGCTACAAACTTCAGGTCATCAGCCCTCAG
AACAAAGGCTTCAACTTCAGACAATGTCTTCACTGTCCTGGTTGAGCTGGGAAGGTTTGA
AACTGCAGCTGGGTCAAGAGCCCAAGTGAGGAGCTCTTCACCGCAGAAGTCTCCACCTTT
GAGAACATTGGAATTGAAGAATCCGCTCTGTCCACCATTTGTCGTCATACTCTCGAGATA
TCCTCTCATAACAAAAAGCATTTCATTCACGGGGTCTCCTTCTCGAATTATGCAGCTGTC
CTCAGTGTACAGCATGGGCTTTAGACGATCACACATTGCATCCAAGAGCTGCTCGTCCAT
GTTTTCGAACATTGGAACCTGCAAACAGGAGGGTAAGGATTAAAGATGAGAGAGCGAAGT
GTTAGATTACTGCTTGGTTTGCAAGTTACCCAGTCCTAGTCGTATTGTAATAGGTCTAGT
TGGCTTGTAACCTCTTATATATACCGATGTATGCGGCTATCATCAATCAATAATAATAGC
TCTATTCAATCTTACATGGTATCAGTTTTTCGGTCCTAGGGTATGGCTCCGCCGCACACC
CCACCGCCGGCTACTTCGAGCGCCAGGCCGCTACCATCGCCCGCGCCGCCGCGGCTTCCT
CTTCGTCTACCCTTGCTCTACCACCACCTATGCCTCCCATGATCTCCTTCACCGATACAA
TCTCCGATATTAGCCCATATATTCCATCACCCTTGATCTCAACTCCCACAACTACTACCA
TTGGCGCCACCTCTTCGAAGTTCACCTCGGGCGCTGCAATCTTCGTTCCCACGTCAACGC
CACCGCCGTGCCGCAGCCCCATGATCCCCAATTGGTCAAGGATGACCACGCCATCATCCA
ATGGATCTACATGCGCGTCACCACCGAGATCTTTAATCTCGTCTTTCGGGATGCTACCAC
CGCCGCCGGTCTCTGGGTGGCTCTCCGGCAGCTGTTCCACGACAATATCGATGCTCGCAC
CAACCTCCTCCACACCGAGCTCAGGAATACGGTGCAAGGCGATTCTTCTCTCAGTGTCTA
CTGCCAACGCCTCAAGTCAATCGCCGACGAACTCCGTGAACTTGGTGATCCCGTCGCCGA
CCGGCAGCTCATCAACATCCTCCTCATCAGGCTCAGTGAACAGTTCGACAAAGCAAGCCT
CCTTCATCCCCATGATGCGCCCCCCGCCAACTTTTGCCAAGGTGCGCTCCATCCTCCAGT
GGGCCGACTGTGCTCAATCCAACAAGGACGCTCGCCCTCAGCTCTTCGCCGTCGTTCCGC
GTGCTCCGTCACCCGCGGCGCCACCAACGGCACCGCCCTCCCCCGCAGCGCTTGCTCCAC
CGCCGGGTTGGCGTCCCAGTGTCGGTGCACTGAAGACTGGGGTNNNNNNNNNNNNNNACT
TGTGCACGGGCACCAGCAGCACCCTTGGCGGCAGTACACGAAGAAGGACCGACGGGAAGA
TAACCCAGGCTCGCCGAGTTCACACCCCTCCAAGGGTGTGAACAACCAGCCCAGGCTACA
AGGCCCCAGCAAGCCCTCCT