| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_159896
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_21799 |
6 |
1573 bp |
None |
Available |
Available |
LOC_Os03g44900.2, FRAME:-1, EVALUE:3e-23, 13103.m04842 protein CCR4-NOT transcription factor, putative, expressed |
CDS Structure of MLOC_21799
Contig Sequence (4264 bp)
>contig_159896 4264 assembly3_WGSMorex_rbca.fasta
CCTATGCGCATGGGCCTTTAGGGAAAGCCTTGGCCAGCCCAATAAGGGCTCACTACAAGA
AATATGCTAACTTACGACCTTCAATATTTGTCACCGAATGGTTATTGGTTTCCATTTGTG
ACCTTTTGACGACCAAAAACAGAAGGTCAAAAGTTGAGGGTCTCTAATGAACTATAATGA
CCTTTCTGCTGGAATCTTCGTAGAATTTTACGACCAAACAAAAGGTCGTTGGTTCTATGA
CCAATCATTTTGGTCGTTGGTTGTTTGAGTAGGCCACGTTGGATCCAACGTGGCAATCTG
ATGTGGCAAAGTTACGACCAAGTAGATTGGTTGTTGATAATATTCAGCCCGGTCCAATTC
GGTATTTTACATGGGCCGAGCCCAACAATTCGGCCTTTTTACATTTTTTTCTATTAATTT
TGGTTAGATACATGGGCCAGGCCCAACATTTTAGCCTTTTTAATTTTGGGTTGTGGCCTT
TTACTTTATATTGATTTTCTTTTTTGGCCATTTTATTTTTGTACTGGTCCCACCAGTCAA
ATTGGTCCCACATGTCATGCTGATCTCAAAATTGGTCCCACACATCAGAAATTTCAAAAT
ATGTCAAACAACCATTATAACTAGAACCCCTTTGCCGGGTTACCGTTCCCGGGATATTCA
AATCACATACACAATCATTATTTTGAACAATCCAAAGAGCAAATGGAATTCGTCCAAAAC
AATACTACATTAGTCTATTACAATCGTTACATTATACTACAGCCCAAATAAGCCTACTAC
TGCCTACAATTACAACACATAATATGCTACTCTTTGTTGATATGCTTCACAACTTCGGAC
TTGGATTCACACTTCACCTGTGCAAAAGATAAGAATGAACATATAAGAATAAGAATGTGT
AGAGAACATCAAACAGTGGTCAATGAGGGATCCAATAACTTAGAAGCAAGAATTNACAGC
AAATGAAATGTACATAAATAGTATGACTAACATTAATCAGTATGTGTTTATAGAGCGACT
AAAATGTTCTCAAACTAGCTAGGATTTTTTTGGTGTATAGTATACTGACATGTGCAACTC
TAATTAAATTGATCATGGAAATTAAAAGAAACACCACCTCAATTGTTGGGCACTTGATGG
CAATGACAGCCATTGTTGGTCCGCCGACGTAGCCAGCTCCGATGCAGCAGATCTTCACCA
TCTTGGCTGCTTACAACCTGTGATGACAACAAATAATTGCCTTCAGAGAATTGAAAAACA
GGGCATCTGACTAATCTTACTACACATCTCAGACTCAGAGTAAACAGAAGCAATCAAGAT
TCAGATTTAAAGAGACGGTATGTGACGGAACTGTTCATAGTTGAAGCTACGGAAATGTTC
ATAGTTGAAGCTACAGAAATGTTCTAAGAAATCTTCTACCCAACTAATCCGACAAATAAG
CATGAATAGTCACAAGTAATTAAATGCTGCCTTGCAACATCCCAACATGATCTAACTTGA
GGTGAAAATATTGTGCCTACTACTTCTGCAGACTGCATACAAGGAGCATGACAGACTGAA
CGGAGATCACACCAATCATTCGGTTCACCGGCAGCGGTAACAGCCAGCAGGCCAAATGAA
AAATTCACAGCACGGAGCACTACTATCCAAACCACTAACTAAATCAAGACAATAAATCTG
AAACAAACACTTGGCCAATTATGAAGACAACAAGCATCTTGAGAGAAACCGAGAAAAGAA
CAGCTACCACAGACAAACCATGCCTCATGCAAGAAGATCAGACGCCAAACTACAGACTAA
AACCGAAGGAGACGCTAACGAGATCAACTCTCACCAGATCTGAGCAACTCGGATAAGATC
TCGAGAGGAGGGGCACGCACTGCTGGAGGAAAGCAACAGAGGTGGCTTGTTGGTATGTAA
AGAAGAAGTTGCTGCCCACGAGTTGTATGCAGATAAGAGGCTGCAACTCCTTATATACCT
GTATGTATACATGCTGCAAAAATATGGAACGACATGGATGTTATCTCTTGTTTAGTGTAT
GTATACATACTGCAAAAATACAGAACAACGGAGGTTCCGGGCTCATTTTCTTCTTGTTTA
TTATCTCTTGTTCAGTGTATGTATACATGCTGCAAAAATACGGCTGAAGTGGTGTGTACT
CATATCCCATGAACATGAACCACAATGACATGGATGGTGTGGAGGAATAATTAGGGGCGG
ACGCATGAAGTATTTTAGTCGATGGTCAACTATGACAACAGAAGAGCAATTTTGAGGACT
TAATCACCTAGGATGCAGAAATTACAGTGTTCGATTCAGATGTATGAAATGCCAAGCTCT
GTCCAACCACTGGGAGCGTGCAATGGAAACCTTCAAAGCCCAGGCATGGTCAAAATCAGG
AACCTGATGTTGATGCAATTGCCTGTTACAACGATACTCTACTAATCAAAACATGTGTAC
AGTTAACGACTTGAAGTTTTTACTGATTAAAACACAATAGTTGGCTCACTACTTTTTTGC
TGGATACGCATTGTGAGGCTTGTGTAAAAAATGCTCTAAACTACAGAACAATACTGGGAG
GGAGCATCTCTCTCGGCATGGAGATTGATGCGGAGTAAGTAATTTGTAAGCATCGGTGTG
CTTGGAATCAGAGACATGTGAGCAAAATTCAGCTAAGTAGAAAATATTCAGTTAGTGTTT
GACCTTTTCGTTGTCCTTTCTATGTCGGAGAAGGCGGCTGGCAATGGATGGACAGATCCA
TGGCAGTAGGAAATCTCATGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAGATTACCTTCT
TGTCTTTGATCTCACTAGATTGGATCCAGGTGTTGATCTCGTCTCGGTAGCGCTGCAACT
TCTTGATCTCCTTCTTGAGGTCGGCTTCGAATTTTTTCCTTCTGGTTCGCATTCCCGGTG
TCGTAGAACTGCCCAAAGAGTCACGCAAAATCGCCCAAAATCATGAGAAATCTTAAGAAG
CGGGGGAGAAGGAGGGGAGGGGAGGGAGGAGGGGGACCTTGTTCCAGATGCAGTCGAACA
TGTCGACACCCTCCTCGACCTTCTTGAGCACGCGGTCGATCTCACACTGCAGCTTCCTGC
TGGCGCCCATGGCATCCAGTGGTCCGGTGGGAGGGGTTGTAACCATATATGTTTACAATG
GCGACGGCGAAAGCGGTGGGGAGGCGGGGGAGGAGGTCAGGCGCGTTGATGATGGGAGCA
GAGACGGCTGAGTCGCCAGAGGAGGGTTGCTCTGGTCGTGGATCTGGATCTCCCTCCTGG
TGAGGCTCAGATGGATGTCCCTCCTCGGGAGGCTTGTGCACCACCATCCGGGCGCTCGCG
CGAGGTGGGTTGAGAGATGGAGGTGAGGTGGGGCTAGCGGATCCAATCGAGGAAGTGCGG
AGAGGTCGCCGGCGATGCCCCGCCCGAACCCTAGCCCCGAATGGAATGGGATGGATCTCC
CTCCCTCTAGTTCTTCTCTCCCTTCTGGTGAGGGAAGGGGAGGGTGAGAGGAGGAGGGCG
TGCGGGAGGCCGTGGGTGAGAGGAGGGTGTGGGGGAGGACAGTGGTGAGCTCCTGAACAC
AGAGGTGGCGGTGGTGATTTGGAAAGGAGGACGGTGGCGAGCTCCTCTCGCTCTGGATCT
CTCTCTCCATCGGGCGAGACAGGGAGGGGTTCGTGGGGAGGGAGAGCAAGGGGTTGGGTT
GACCCATGTGCTGCTCGTTGTTCGGTGGGCCCAGCCGGTTTGGACACAATGACATGTGGG
GACCGGGCTCGGATGTGTGGTGGGTGTGGGACATGGGTTGTCCGCCATGTCATCAATCCA
CTAGAGTTTGGTTCCACCCAATAGGAAAGCTCCAAATAATTTGTGTTTCTTTATACTATT
ACTTTTGCCAAAATAAACATGTTAAAATTTAGTAAAAATATTCAAAAAAAAAATACGCGC
CTTCTAGAGTCTATAAACAAATACCACACCAAATTTCATAAACATGAGAGCNNNNNNACA
TTTTCAAATAATATGAATGGTCGTACCCACCGTTTTGACCGCATTTTGAAATGGGCATGG
AAAATTCAAAACAAATCAAAAAATTGGAAAACCTTCACATTGTGTCATTATATGTGAAAA
TTTTACCAGGAAAAACATTAAACTTGTGATACGTCATTTATTTTTAAAAAGTGTTCTAAA
AAATGAGCTATCATGTGTGAANNNNNATGGCTTTCAAGCCAAATGATCAATTCGTATAAC
TTCG
