Contig Data
morexGenes
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Map Locations of contig_159874 (5611 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159874

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21781 5 1788 bp MLOC_21781.4 Available Available LOC_Os01g56860.1, FRAME:-1, EVALUE:0.0, 13101.m06030 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_21781






Contig Sequence (5611 bp)

>contig_159874 5611 assembly3_WGSMorex_rbca.fasta
GTTGTGACTGCGAGGGGATGTTGAGTAATGTGATTGTTTAGGTACGAATAGATAGACTAG
GATTTGTTCCTGCCTTGACTTGTACTCCAAGATGATCATGTACTCCTATATATATGCCCA
CGAGGCTCAAGCAATACATCAACTATTCCACCAATCCTTTCTCCCGTTCAACAGTTTGTG
ATTGTTTGATTCGTCGATTCCTTCTCCTTTACCCACACGAACGGAAAAGACAGGGGAAAA
AGAGTCACCCCCAGGTCATAGGATCCCAACCACCGGTGGAGTGAAATCCAACGAAAAATA
TCAGTAATAACTAAAAGTATAAAAAAACTATTATTGAGTCATTTAAATTATAGAAGAATT
CATGAACGCAAGAATTTAAAATGACAAGTTCCTCTCTCTACCCAGAAAAAGAAGAACTAT
TAACAAATTATATTTCTTGAGAAATGCAAAATGATATTGGAGATGATCCTCATTATTTAT
TTTGACCCCGTACCCCCTCCGCTTTCCTAGACCACTCGTGCACCGCACTCCGCCTCGGTC
GTCGACAGAACACACAAGTTGCCTAGACATGCTTTTACTTTAAACTCTTCTTTTTTCAGA
TGATATTCCCCCTAGCTTTATTGTTTTGGATATGATAAACGATCACCCGCAAAAAAAAAT
ATGATAAACGATGTATCCTTATTTGTAATGAAATAAAGTGCAACATGAAAGCTTTCCAAA
AAAAGTTACCTCCGTAGCACTCAAAGTTGCTCTTGGAAAAAAAACCGCCAAAACATACAC
ATATGAGATCTACTTCCTATGTCCAACATTATAAGATGTTTTTGTAAACTATGTTAGCTT
TGGAATTATAAAGTGCCCATGAACAATACGTTTTTTCTTGCTAAACATGTGCGATGTGTT
GGTAACTTGGAACTATACAAAGTAAATCGCAAAAATCAGAATGGAACTGGGTAATGCTGA
ACCTGTCGAACAATGCAACATTTCCATTTCAGCTCACAAACTTTGTTTCGAAGAGCAATA
TCATGATGCACCAAATGGATTTTGAAAACCCAGGGTACTGTTTCCACTATACCTTTCAAC
ATTGAACAACAAAAACGATGTAATTGGGGGCAAAAACATGAAATGATACAAGATACACCA
GGGAAAAAACGATTTACACTCTACTGGGAGGCCTATACTTCTGTAAATATAATCGAAGGC
CGGTCCATCTTCTTGCCCAGGCCTTGTGGTATGTTACAAACAACATGGTGGAAGGTACAA
TGTAGGGACAATGTATCAGCCTCTACAATTGCTGTATACAAGCATCCTCGAGATGTGGCG
TTCACTCTAATTAGTTTTTGCCCGTTTCCATACAATAACTGTACCGTCTGAATCAGATGA
GGCAAGCAAATTTTCCCCATGATTCCAGGCCACTCCCATTACTGGAGAGCCGTGTCCCTT
CAGGAATGTAAATGGTTTCATCAATACATCAATTTGTAACCAAAGTTTGAAATGCGACAA
ATAGAGGGACACTAAGCATACCTGCAGTTTATTTACACATGAATTCTTTGGTCGAGCCAA
ATCATAGAAATAAACATTTGAATCCCCACTGCCAGTCACTTCATATTCAGAAGAAAATAA
AAGTCAGCTAGATTTATTTACTTATGTTTGCAAAAGTTTCAGGAATGCATTATATTCTTA
TAGGCGGAACACAAAAGGTAGCAACTGGTGAACGGCAGATGATGCATTTATTCTTGGAAA
AGCAAGCACACTCAGTTGCCAAAGATATCCATCGCAGGTTATTAATTTGTTTCAAAAGTT
CAACTCAACTGCCCAAAAAAGTAGTGTAACAAAGTTTGACCAGGAAAACTTGGCATTAAG
TGGCAACTGTGATTGTCTTGATACTTCACTGGACTAAAACCATGACTCAGCATTCACAGT
GATTAATGAAATAGTTGAGCAAGATTTGAGGGCAGGCAATGCAAAAGTGCATTAGCAATT
GGGTGCAAACTGATGGGAACAAGATGGCCCTAGAATCTGGATGATCAGCAGCTTAAGAGC
CTGTTTGGGACTGCTCTGCTCCTTAAAATTCAGCTCTGTTTCAGAAAAGACAAGCCAAAC
GGGGTAGCTCCACGATATGCTGCTCCGCAAAATAACTAGAATCTGGGGTATAACTTCAAA
TTTATGAAGCTCCTGAGAGGGTGCTCCGAAAAACTCTAGAAGCTGGAGTTGAGGAGAAAT
TACCCACCACTGCCACCANNAAGTGGATACCCCTTCATTTCTTTTCCCTCAACCAATCAA
ATAGATTCCTTCCACCAAATTTTTTATTCTTGAAGCTGGAGCTAGATGGAAGCCAAACAT
TCACTTGATAGTGCCATAGCTTTTGTATGAAACTGCTCCAAAGTGAATTTGATGAAGTGA
AGCTGATTTTGATGAATTGAAGCAGTCCCAAACAGGCTCTAAGTTTCAGCTAACTAGAGC
CAACAACTATGGTTTCTCGGAAAAAAGCAACAACAAATAATTCCAACTCACCTATGAATT
CCCCTTTCTCAAGGGAAAGAAGTGGACAGAAAGAAGCACGTATATTCTGCACTGGTGAAG
CCAATTTTACAGAGCATATGAGAGTCAAGTATCCATGGGAATTTGTTGCAATGCTGAAAT
GCCAATAACAGAATACTGGTGAGATAAAAGTGGTAGCCTAGCCACAACAGGATGGGCTGA
AATAAAGTACACACCTGAAGAAATACAGGTTTCCATCTTGAGCACAAGATAGAAGTACTG
GACAACGTGCGACGAGAGAGAAGGTACGGTACTGGATGGTTGTAACAGGAGATTTGCTCT
TACAACTCTTGTTCTTATGAGTTCTAGATAACGACCCTGTGTGAGAGTTCACACTAATAG
TGTATATGTAACCCTGCACATTTCAAACATCAATTCAAAACTACAAAATTTAAAATCCAC
AGTAGTATTTAGCAAATTAAGTTATTTGATACCTGCGCATCACCAGCAAAAATAAGCTGA
CCAGTGTGGTCTATATCCAACGCTGTAACCGCATTGTCACAAGTGAGTTTGCTGATTACC
CTCCCAGTGCTAAAATTAATTGCCTAGATCAGAAATAAAATTGGATCACACGGCCGTTAA
AGCAATTGATGGAAAATGTTTCTGATTACAAAGGTTGATGTGATTTTAAATTATTTGACA
GACTACAGGTACATCATTTACATTGAAATAAATACCACAACAGACCAACATCATTTTTTT
TATTGCACAACAGAAAATTAATCGGAGGACCAGCCAACAAGCAACATATGCAAAAGCATA
CTATTGTATATAAATTGTGAGAGCAACAGGGCAGGAAATTTACATTGATTTCCCTGTTTG
CATTGCCAACTAACAGCAAATTATTGTTCACCTGCAATAAAGTACCACTAGTAAATATAT
GATATGAGAGATAATATATGTTGGTTACTGTAAAAGGAACAATGAGTTATTAGCACTGCA
GATGCAGGTAAAAAGCATTGGTGAAAGGAATGGGAAAAAATTAGCAATCATACTTTCCTG
CTAAGTCTGGACTTACTGGATGAAAGCAGATGCATAGCTGGGAAGAAACTCCATATACGA
CTCTGATACAAGTGCCTTTAGAGATCTCCCACACTCTCACAGTTTTATCCATAGAGCATG
AAGCTATGTACTGGTTATTAGATGAAAAATCAAAATCTGTAATGCAGTTAGAATAATAAA
CTCAAGATACGGGAATAGACAGGAAAGTACAGCTCGAATTGATCATGCTTCGCTTATATT
CACAAAATACAAAGAATATCATAGTTTTTCAAGTCTTGCACTACTCCTTTAGCTATCACA
AGCCCAAATTTATTTAGTTATTGGTATCACTTCTGTGCATAATGATTCTATATACTCAGG
GTTTATCCTCTTGACCAGAGAGGAATGTATTATTCATAACAGGAAACCACAATTAACGAA
TCAGTATATTTGCTAAACATGACAGCAGTGGGAACCAAAAGCTTTGGGTATGCATAGCAA
GCCTTCATTAACTTGCATGAGAACTACTCCCTCCGCCCCATAATATAAGTGGTTTTGACA
CTACACTAGTGTAGAACACACTCTTATATTATGGGAGGGAGGGAGTACAAAGTTATTTTG
TAACATTACATGGCTTAAGTAGTTCTTGGTTACTGAGGTATATGCCGAATCAGACCCATA
AACATCAGGAGATGGGCACTGTAGCACATTATCAATGCAACACATGACACAAGGGACATG
GTCCTATGCAGATTTTATGCACATAGGAATGCATGCTACTAGGTGTAGATCTCAGTTTTC
CTAGCACTTGAAACCAGAGAAATTGTTGAAAGTGAAGGTAGATATACAAAAAAAAAGATA
GCTTTACAAACACGATTAAGTGGTCAACCTGTGATATCTTTAGAATGTCCTGTTAATTTT
TGAAGAACAGATGGCGGCTCAGAAACCTGGCAAACCGTCAAAGTGCCATCGGATGAACCA
TAAGCAAGCACATCTGAATTCATGCGGCCAAATTTCAATACGGTAACTGCCAAGGAAAAA
ATCAATACCATTCAATTAGGTCATATGAGAATACTAGTTGACACAGAAGACACTGTCTAG
CATGACTACGAGCAAATAACCTGATGCTTTGCAGTTGTCAAAGATGCAATGCATTCCAAC
AAATGAGTATGCAGGTTCGGCGAATCTGACATGGCGCTCAGGTTCGCTCTGCTTTGAGCT
GACACTCAAGGTGCGGCTTAACATACCGCTGTTACTTCTGAGGTCCTGCGGCAAAGAAGT
AACATCAGACTTCACCGCAACATGTGTACACACACTTCTTCAGGAACAGAACAAGCTTCG
TGGGAAAAGCTAAAAGAACAAACCCTGATAGAACTCCAGCTGTCTGCTTCAGAAAATGCA
GTAGGGCTAGCAAACCACCTCCCACTGGTCAATGAGAAAGCCCAGGATGTTAGATTTCAC
CCTTCATAACAGACCTCATGCTTAAACGATTGGGCGTGAGAAGAAACTAAGTGGACAAAC
ATAAGCAGTAGTTCGAAATTACATTAATTACAGCACCGTACACAAACTTAGCAACGTTTT
GGTCTCGTTTCGTCAAAGGTAGGCGCGTGTCAGGCGACTGAAGTACAGAGCAAACAGAGG
GGGCGTCACCTGTTGCCGGGCGTGCTGTGGGCGCTGCTTGATGCGCCACCGCCGTCAATA
CGGCGGAGGAGGAAGTTCCGGTATGCGACGTACCCCTTGCCGTTGCACCGCCACTCCTGC
AGCGTCCCCGTAGCAATCCATCCAATCATTACATTGTCCCCGACGCATGAAAACGAACAT
GATACCATTGGCGGGAGGAGGGATCTAAGGGCGGGTACCATGCGATGGTTGAGCGCGGAG
GGAGACTTGCGGCGGAGGAGGAGGCGGCGGAGGGCGGCGTAGTCGGGGTCGGGGCGGGAG
GAGGAGGAGGAGGGGGTCGGGGGCTGGAGGACGCAGCTGAGGAAGTCGGGGTCCGTGGGC
CGGGAGGGGCCGGGGCAGGGCGACGACGGGGCGGGGGCGGGGGCGCTGGCGCTGGCCGGG
GAGTAGGCCGCCACTGCCGCGCCGCGGCGCG