Contig Data
morexGenes
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Map Locations of contig_159836 (4052 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159836

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21748 1 669 bp MLOC_21748.1 Available Available LOC_Os02g02630.1, FRAME:+2, EVALUE:3e-15, 13102.m00208 protein THION20 - Plant thionin family protein precursor, putative
MLOC_21750 1 688 bp MLOC_21750.1 Available Available None
MLOC_21749 1 342 bp None Available Available None





CDS Structure of MLOC_21748






CDS Structure of MLOC_21750






CDS Structure of MLOC_21749






Contig Sequence (4052 bp)

>contig_159836 4052 assembly3_WGSMorex_rbca.fasta
TCACGGTTAAAAATAGGAGCCAAAGTAGGGCGCCAGAGGGGGTGGGCCCCACCTAGGCGG
CCTCCCGGCGCGGCCAGGGGGCAGACCGCGCCAGCAGGTCGCCTGGGGGCCTTGTGGCTT
CCCTTTGGCCCATCTTCTCGCCCATGGTTCCTTTCGGTGCGTGGATTTTCTCTATTTTTT
ATGAAAATTTTCCGGGACGTCAAAATATTCATTTTCCTACGCACAAGAAAACCAAACAAA
CAACTCTGCTGAAAACAGCGCCAGTCCGGGTTAGTTTCATCCGAATCATGCAAGACTGAG
ACCAAAACAATAGCAAAAGTGTGTGAGAAAGTTGATACGTTTGAGACGTATCATGTCGCC
CGAGGCAAGGGGACGCGAGGGGTACGCGAGAATTTCCTCCGTTTGCTAGCAGTTGCAGAT
CTATGCAATGATTCCGTGGGAAGATGGGATGACGGTAGATCCTAAGCGTGCGCATGGAGT
ACGCGTTCTGGAACACCTAGGCCGGTTGGTACTATCACCTTGATATGTGGACAGATGCTG
ATTAGATGGTGCTCATTAGTCATGGCACATCTTTATACTTAGGTGTAGTGATTTCGTTTG
CCTTGACGATGACTTTAGATTGATCGTTGTATTCATTTTGTGAGGCTGTGATGAATAACT
AATAAAGATGACTACATGCATTATTTTGATGCAAAGGCCGGGAGCAATCTTTCCTTTAAC
ACATCAAGACACTTAAAATGGCAACCTGTCCCTTACTACTGCTAAACAGCAAGTGGGTGA
ACATCTTTATGCAATAATTTGCACGGGTACGCCATCCCATATAAACAGCACTGTATGAAA
GCTGCATTCAGTTTTCTTTCTACATCAGCACAGGCAGCTTCATAAGGTCTTGTCTGGGCA
GAAGAAAGACGAGTATCCGGATATTTTTTGTGGTCTCTGATTTATCTCCCTACGTGCAAC
AGTACAGTTAAACGAAGGTGATTAAACTTACAGTAAGTCAGTAACTTGAACTGGTACCTC
ATCGCATAAACTGCCACTGCATTCAGTTTTCTTTCTATATCAACACAGGCAGCTCCATAA
CTCATAACCAACCTTAACATCCAAGGTTATTTTCAGGTGCACCAGGGCTAGTGATAGTAC
ATAAAGTCTACTTTTGTTCAGAAAATGAATAATACCATGGCAAACTTGGCTACAGGACAC
CCAACATGACATTTTGGGCCATTTAATTTGCTGCAAAATACTGAAATACTTTACTCGGCT
GCATTACAAATTATCAAGGTCAATGTCAATATTGCCCTCGGAACTCTAATCCTACTGCTA
TACAAGTGCCCACACTCAGACTTTCTGACGAAGAACAGAGCCGCCACTCACCACAGCAAT
CCTCTTCCCTTCGCCAGCACGAGCAAGGAGATGGAGGGGAAGAAGAGAGCGGCGGCCATT
GCCGCCCTGTGCATGGTCCTACTCCTCATGCAGGCAAGGCCATCCCATCAGCAGTTCTCC
GACTACGCCTGCGAGTGCATCCGGCAGTGCTACCCCGCGTGCAGGGACAGCACCCCGCCG
TGGCTCTGCAAGATCAAGTGCGCCGGTAGCTGCCACAACGGCGACAGGAAGGACGCACTT
ACCGCCTGCAGGATCGCCTGCCTCACGAGCCCCGTCTGCGGCCTGTCGACACCGCCCGTC
GGTAAGTCGACAGACAACTTACTATGTGGATGCGTAGAAAGGAGAGAAGAATCATCTGTT
CTGATGATCTTGTGCTTGCATTGCCATTTTGCAGCTCCAGGTGATGTTGATCCTTGTACC
AGGGAGTGCGACAAGCTGTGGGGTGGCCATGGTCACGCCAAGGAACCTTGAAGAGCGACG
AGCCGGTCGATCCGGGATCACATGATGTCGAATGGCGATGATTGCTGCACCAATCAATAA
AATAAAATGTATTTCGCTTCGGTGCATCACTTGTGAGAAAGTTTGTGGGTCTTAGAAGTA
AAAGTAAAGATGGTTATCGACGCATTTGGCGGAATCCTGCTAATTTTCATTTGGCTTTGA
TTTTACTTTCCTTGTCTTAAGAGGATCGTTTAGTGTTTACACACTTTATTTTTTAAGAGC
AGATTGTTTGCACGCTGTATTTGGCAAACTCATCCGGGCTTCACGTGAATCTCAACGAAA
GCAAAGTAATTCAACCTTGGCTATAAGCAGATATTTGACTCAGAATTCCCCCTACGAGAT
ACAAAATGGAACAACAATCAAAAGAAAACAGTGGAAATCTAAGCACACAAATGTCACAGC
CCTAGATTTAGACTTGTTTGCCATTGCATAATCATGCATACATTTTAAATTCAATTGAAT
TTGAATTGAGGAGTGATTAAGCCTCGGAAAAAATTTCTGTCAAAAGAGCAACATAAAAAT
TGCTTCAAAGAAGTCCTAGAAAATATCCCTGGTATTCTAAGAAAATATTGGAACGAGATA
AACTTCAAACTAATATTTTTGAAATCACAGCAACATTTAATTTTTGGCATTTAGTTAATC
TAACAATTATTTTTCTTGAATTTATATTTATTATAGATAAAATATAAGTCCATATATTCT
GAAACATTTTGTGGTGCTGTGGTTTAATTCATTGGACTCACATGCTAATTATCAGAATTT
TATAAAATGGTTTGGAATATTTTTTAAAACCATAAAAAATAAATAAATTAGAAAACAGAA
ACTTAAATAAATAAGAAAAGGTAGAAGAGGAACTTACCTGTTCGGTCCACCTACCTGGCC
CAGCGCACGTAGCTCCCTGTCGTCTTCCTTGTGAGGACAGTAGGCACAGCGCGTGCTTGT
CGCGCGCGCACACACACCCGAGCCACCTCCTGCTTCCCTCTCCATGTCGATGCGCTAGAT
AAGCTCGCGGGAGACGTCTGAATCTAGCTGACGTCCCCATTCCTCCCCCTTGCCTCTCCC
TCGCCCCTGCATCGCCATGGCCGAGGCCATCGCGAGCTCGCCGCCGTGAAAACCTCGACC
AACGCCTTCCTCTTGCCCCTCCGTGCTATCCAGAAGCTCCGACACGACCTCCTCTACATC
TCCGCCGAGCCAAGCATCGGGGGACGCCCTGCAGAGCCGCCCTCAACACCGTCCTCCTCC
TCGATGCCGTGAATCGTCGCCGCCAAATTCATCGCCTCCGCCGCCTCCTCGACCCAGCTG
AGCCCCTCTTCCGGTCCGCTGTGATCTCTGCCGCCATTTTCCCCTAGCCCCGTGGCCTAC
CCCTCGTTGTAGCCACCGTTTCCATGTAGCCCGAAGCAAGCCGCCGCTTGAGCTTGTCGT
CGGCGTCACTCCGGTGACTGTTGGGTCACACCACCGTGCCTAACAGCTTTGTGTGCACGT
GTAGAGCACGTAGGTGCGTCGGATGCTCGAATCGCTCCCCGCAGCGCCGTCACAGTCTTC
ACCGAGCTCCGGCAGTTGCAAGGCTCGTTGACGGGAAGGTCACGGCCACCCCAGAACTCG
CCCGTGACTTCACTCGACGCATAAGAGCTCGGGGGTCATGTAGGTGCTCTCCGCCGCGGA
TTTGGTCGTCGAAGGACTAAATCCGAGCCCTCTGTCGTGAGAAAAAACCTGACAGTAGAG
GTGTACGGTACGAATGGAGAGGGCACAATCCTAGCTACGGCAAGATTGTACGCAAGATGT
ATGAGTTCACAACCCTCTCTTGGAGGTAACAGCCCTACGTCTCAGGTGCTCAGGAGCTCT
TGCGGTGTGTTTTGTGTAATAGAGGGAGTGCGAACCCTTGTGCTAGAGGAGAGGGGTGGC
TTATATAGAGTGCGCCACCTCCCATCAATACCTCAGCATCTAAGGGCTCGGTCAATATGA
GTTAAAGATATATGTCACTGATAACGTAAGTGGGTAATAAATGTTACTAAAGACCATTGG
ATGAACATGTATCCGTTGGCACTTGTGGGTGACTTCTGGTCTTCAATGCCGACTGGAATC
CTTCCAAGTGTATATGGGTTGTCGAGTGGATGGAAACGTAACCCGAGTGTTTTCGTACCG
AGTGACTTTTAGGCGCCATCTTCATCCAGTCG