Contig Data
morexGenes
Links



Map Locations of contig_159793 (4561 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159793

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21703 1 1394 bp MLOC_21703.1 Available Available LOC_Os06g22919.4, FRAME:-1, EVALUE:2e-144, 13106.m02466 protein DEFL9 - Defensin and Defensin-like DEFL family, expressed





CDS Structure of MLOC_21703






Contig Sequence (4561 bp)

>contig_159793 4561 assembly3_WGSMorex_rbca.fasta
TCTATATAGCCACACATGCATTCATGTTTTCATTCAATACAATTATAACATGGATAATAA
GCGATTATCTGGAAACAGGAAATATAANNNNNNNNNNNNNNNNNNNNNNTCTAGGGCATA
TTTCCAACAGGAGCTGCATGCGAAGAAGTAGCGGGCTGCAAAGCCATGATGGAGGTGTGA
AGCGGATACGGCGTGGGGGCGTAACTCGGCAACAAACCAACCTTGGCTGGCCAGAATTTT
GAAGTCGGGCGCGGCAGCGGCAGGCGATTGGCTGTCGCCGACGACCGTGGCTTCCTCCTC
TGGCCCCTCCCCCACCTTCGTCGCCGCCCATAAGCCGCTCCTCCTCCTCTCTCCGCTTCG
AATCACCGCTGCTCCGCCGCGCTGATTTGCGCCGTGCTGCACCGATTCGCCACCCTCGCC
GTCCCTCCGATGCTCCTCCGCCGCCGTCCCCACTGCCGCCGCCCCGATTCGGCCACTGCC
CACTAGTTTTTACATCTTCATTTTGCATTACCTATTGGAGTTGCACTTTTACATCTCTGT
TTTGCATCATCTATTGAAGCTGGTCCTTTTTTGAAGATTCAAAAAGCACTTTTAGGATGT
AAATTTTTACATCTCCTGTTTTACATCTCCAAATTTGCATCTTCTATTGAAGTTGCACTT
TTACATCTTTGTTTTGCATCATCTATTGAAGTTGGTCCTTTTTCGAAGATAAAAGCCACT
TTTTAGAGATGTAAATTTTTACATCTCCTGTTTTACATCTCTAAAATTTGCGTCTTCTAT
TCAAGATGCTGTTATAGTTTAAGTTTATAAACTGCGCTACGAAGCTATCCCATTTCTCAT
TTTCAGCTAGGTCGCACATGGCCATACCATTTTGTGAACATTTAAATTGATAAGTGTCTA
TGGAATACGTAGCTATCTAGTATATCCCTGATTGTTTTCGCAAAAAAATTCAGAACTTAC
ATTTTCCTTAGGATCCATAAATCAGTTGTGTAACATAAAAGGATTCCAGTAAATTGGGTG
CATCAAGCATTAACATTGATTTTACTAGCGGCGATCATTTCACTTGAGAAAGACGCACCA
TTTACCACTATGTGATCCCAACAGGAGAAACTTTATATCCGAGAGAAGGCAACATCCTCT
TTGGATCATCATACATCATCGATCAGGCCAGAAGAGAATGCACGTAGTAATCTCGCAAGA
AACAATCAACGCAAAAGAATAAACATATCAGGAGATCCGAGGCGACGCCCCTCCAACATC
CAAGGAAACAAAATGGGAGGAATGCATGCGCGCATCGTGTTGATCATGGATCATCGTATA
GCGCAGTCCTTGATTTTATCATCAGTACTGTTCCATGTCGCACTCGGGCGGCACGGGGCC
TTTGCCGTCTTCCCTGGCGGAGGCGCAGTAGTCGTAGATGGTGTAGCCGAGCTGCACGGC
CCTGAGCTGGCGCATCTGCTCCTTGGTGAGCTGGGACGGCTCCGGCGCGGTGGACGCGTT
GCAGCCGGCGGCGCACTCGGCGTCGGCGCCCGAGCACTCGCAGACGTTGAGCCCCATGTT
GCTGTACTCGGCGACGAAGGGCGCCTTGGTCCAGTCCGTCTTGACGCGGCCGCCCTGCGT
GGCCCAGTCGTCCGCTGACCAGATGCTGGAGAAGCCGTACATCGGCCGCTTCGTCGGGAA
CGGCACGCCCTTGCTCGCGTAGTTGCGGAACACGCGGATCGGGATGCTGTCCACGAACCA
CCTGCATGCGCGCGCACACACACACACACGGTCGACCGATCCAAGTTAGTCAGCCTCCCT
TGATCCTCAGACGCAGTACAAGCCTAGCTACAAGGGATTGGTGTGAGAGGGATGCATGCA
TGGGCTGCTTACACGATCATGGAGGGGTTCCAGAAGATGGTGTAGTTGTGGAAGTCGGCG
GTGGGGTCGAACCAGGGGTAGAACTGCATCTCCTTGGCGCCCACGCCGTCCGCGAACACG
TTGGTGTGGATGGTGTAGGGCTGGCCCGTCTCGTTGCCCAGGAACTCGAAGTCGATCTCG
TCGTGGTCGTCGCCCACCGACGACGTCTGTCACAATTAGTTTCTCACGATCAATCATCAG
TTTCTCATAGACATGCATAGGTCTGACGAGAAATGTGCCATATGTATGGCGGCAAACAAT
ATGTTGACGTACATAGTAGGTTGTGACGGTGCCGGCGGAGTTGCCCTTGACCAGCTTGAT
CAAGGTGGATATGCTGCCGTAGATGAACGTCTTCTTGGTCCGGAGCATACTGCCTGATGA
AACCAACAATCCCAAAATGGTAACGATCATGTCGCCACGTACGTACAAACGGAGTTTTTC
AGTAATACAAAGAGCATTTTGACAATGCACAGCTGCTGAGAGATAGTACGATGTGTTACC
TGAGATGTTGCTGACGAGGGAGAGCGTGAGGTGCTCCCCTCCGTCCGTCATCGCGGCGTT
CTGCGGCTCCCACGTGATGTCGCACAGGTCCGCGAAGTTGGCGCCGACGAGCCCGAGCTT
CAGCACCGCCGCGAAGGCCACGACGGCGACGAGAGCCCGCATCGACATCCCCATCTCCTC
CTTGCCTGTGGATAGCCAACTGATTCCTGCGATCGACGACTTCGAGTTGGTAGAGAATTC
AGAGGGGGCGCCTAGCTTATATAAGATGATGAAAAAATAAATTCATTTCCAGTTTGGAGA
GGGGAGGTTTTGGTGCGCATGTATGCACGTAGAAATGAATAATGGTGTGCGAGCAGCCCC
GACGGATTCTGCCAGCTCGTTCGACGTCTGAATGATTTGACTAATGGAATCTTCCGATTG
ATCTAGTATAAGGAATGGTTCTTGGTAGAGGGTTTAGTAGTGCCCCGCATGACCAATGTT
GTTGTTCTTCTTCAACAGGCCTGCACGCGGCGACTGCTGATATAGTGCTTGCCATCACCT
CCGGCATGCCGTATGTGTCACTTGGTCAATGCCAACGGTTTTCGCCATTTGTCAAATGAG
GACATTTTGGGAAAATGTTTGCTTCAATGTTTCAATCGGTAGTATTGCTGCAGTTGAATT
AATCATGTGTTCGTTTGATTGAAAAATAGTTAGGGAAAACTTTTTTACAAGAAGTTGTTC
GTCTGGTGGTGACGCCTGAGGTTGTGTTGCAAAGTCATTTTGCACGGTAACGGTACCTTC
CGATACATCTGTGACCATTCGCTTTTTTTTTTATGATAATACGTGTCACATTCCTATAAT
AAAGATCAAATTACAAATTACATAAAGTTTAACATGACAAACCAAAAAGATAGCAGAACA
TCGTTGAGCTTGACACGAACCTCCATCACGTGTCTTCGGCACCATCGCAGCAACTATCAG
AGAAAAAGCTGATGGATCATCTTCTCGCCCGAACTCGACTCGCCATCATCGTTGATATGC
AGCTTTGCGAATCTTCAAGGTGGCTCATCAGAGATGAAGCCACTGTCGATGAACGAATCA
GACGGGGGCAATACCCCGGACACGTCATCGAACTCCAGATTTGACACATTATGACTAAGA
CACCGAAGGAGGAGACCACACATGTCATCCATCAACCACGAACCGAGCACACGTCTATCT
TCCAGATGTCGTTGATGCAGACCACAATCCGTATCCGCTCCTGGACTACCTCCCAAGCTC
CGCGCCGACGGTGGAGCACACGTCGTTGCAACGGCGAAGCCCGAGGACATAAGTCCACCA
CAAGAATATCATCGCCGCCACGATATTCCCGCTTGAACAAACTATTTTTCAAATCCATCA
CTGATCATAGAAACGATCGCCTCGTCAAAGAAAAATCCGAACTTCTTTATTCAACATAAC
CGTCGCCGTCATCGAAGCCAAGACGTCAAACGATCAAAGACCTAAGCTACTAGGACCCTA
ACCCTAAAGCAAAAAAAGATCCGCACGCGCGGGATCCGACGACCATCCTCACAACCGAGG
ACCTCACGGAGGAGAGCCGCCGGAAGATTGGTTCTCTTGATGGCGGCGGCTAGGGTTTTT
GATCCGTCCCGCCCCGCGACTCTCTCTATTCATTCTCTCAAGAACCAAGCCTGAATGAAA
AAATACTGTCCAGCCGTTCGCTTTCTCTATCGTGCACTATGGCTCACCTAGATGTACTAA
TATATGCTTTGCACATGTCGAAAAATATATGTTTTGTATCTTTTTGTTTAATCAAATCAG
TGTCAGTATAATGGGCCCAAAGTACATCTTTTATCAGGAAAGGTACGCAGCTCTCTCCTC
TCTCTCTTCTAAAAAAACATACATTTTATTTCATGTTAAATAATTTAAATCACTCATATC
TTTTAAACTATAAACTTGATTTTGGAACTTATATATTTGGACTCCTGGCATCAAGACCTT
TAGAACTAGACCTGCTTTGAAAACATTTCAAACACATTCAAATTTCAATGTGTCACATTC
TATATGTGAAAACGAAACCTTTATTCACCAGAAAATGTGGAACAAACCTACTTCACGAGA
AATATGTGAAAGAAACCTATTTGACCCAAATATGGAACTGAAATGTCCACTTGTCAAACT
G