Map Locations of contig_159767 (4290 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159767

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21688 2 1804 bp AK364194 Available Available None





CDS Structure of MLOC_21688






Contig Sequence (4290 bp)

>contig_159767 4290 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCCGAACGCACATCGCCAAAAGGCCCTAAATAAATTCAGGAAA
ATACGAACACGAGTGTCAAGTTTAGGACTTGAACCCTGATAGGCTGGGTATACCATTGTC
CTTCTAACATTCCAACCATAAATTGGTTCGCTCATGAAAAAAATTTGCTCATTCTTCACA
GAATCTTAGCCTTTCTAGGCTATTGTTGATAATAGGATGCTACTTCTTCCAACAAAAACT
AGGTTTCATTTGTTACTCGTCGTAGTCGGCGACGATCTGCCTCGTCTCCGGTAGCCCTAG
GGCCATCAGGGCGTGGTAGATCCTGGCACTTCCCAGCGGGCTGGCTTCGGTTTTAGATGT
TTTTCTTGGTTTTGTTACGGTTTGTGTCTGCTCAGGAAGACGATATGGCAGCAGCTCCTT
GGAGATGGAATAAGGTTCTCATCGCGTAGCCACGTTCCCTGAAGATGGAATAAGGTTCTC
CTACAGACCTCATAGGATTCGGTAGGTGTGTTGTCTTTGATGTCTCTACTCTGACCCGGT
CTTTGTTTTCTGCCTTCCGGTTGGATCCTTCCGATCTACGCGTCTCTTAATCATCGACGG
TTGTTGTTCTAGTGCGCTAGTCTTATGGGACATTACCACGACAACTATCTCACTGTCTAG
TACAATTAGTTTTGCCCGATTCTGGCAAAGGAGGGGCGAGGACGGTGGTGCACCTTCATC
TTGGTAGTATTTCTTAGGCGGTCTACCAATCAGAATGTAATTTATTTTTTCTAGATCAAC
ATTCGACTTTATCAGTTCCCCACATTCTTCAGCAAAATACACATAGTGTTCAGGAAAAGT
CCAAAACAAACCTTGAAATTGTAGAAGAAAACAAATTCAAACCCTGAACTTTGAATCTCG
AAAATTGGCATTCTAAACTTATCAATGTCAGTTTTTTTGGACCCTAGACTTGTTTGACAC
ACCGGGAATAATACAATACCGACCAGGACAACATGTTACTCTCACAAAGAAGAATTTCAG
ACGGCTCACTATACCACAACAAGAATTGGGTAAGTTTAAAAAATGTTTGTGCATTTCTAA
AATTGTTCAGGAGTTAAAATGTTCATGTTTTCTCTTCTTGGCCAAATATATTTGTCAAAA
AATGTTAGGAATTGCAACAGTTTTTCACATGCTATGAAAAATGTTTCTCATGTTTAAGAT
AATATTTTTTGAATTTAGTAAATTATTTGAATTTTGAAACATTCGGCACTTAAAAATTGT
TCACAAATTTTTAAAGAAATGTTTTAATTTTTTTCATAACTTTTTTATCATCCCCTACCC
GCACCTCGAGTGCGACGTCATTGTATCGAGAACTTGCAACCTTTGTGTAACTAAAAAATA
AGTATTTTGGAAAGTTGTTTTTTCGAGGAAGTTATTTAGGGAAGTTTCAAAAGGTAAGTG
TTTTTTAGGGAAGTTCTTTTGAGTAAGTTTTTGTGGGAACATAAAGATAAAATTATGTGT
ATTCAAAAATATATTTTAAGGGAAGTTTTTATTTACGAAGTTTTAAAAAGGTTACTGTGT
TTTTTAGGGAGGTTTTATTTGAAGAAGTTTTTCAGGGAAGTTCAAAAAATGTTACCGTGT
ATTTGAAAATATGATTATAGGAAAAAAAATTGTGCTGTTTAAAAATATGTTTTATTGTCA
TTAAGAAAATGTACAACATCTATTTCGAAAAATGTTACCGTGTATTAAAAAAAGTGCTCA
AATCATGTATTTTCTTAAATGATTATAATGTATTTGAAAATGGTCAAAGTGTATAAAAAT
ATGTTTTTCGGGAATTTGTTTGAAGGAAGTATTTTAGGGAAATTTTAAAATAGTTTTATT
GTCATTTAGAAATGCACACTGTGTATTTCGATAAAGATTGCCATGTTTTTTAGGGAAGTT
TCTTTTCAATAATTTTCTTCGGAATATCAAAATAAAATTGTGGGTATTCAAAAATATGTT
TTTAGGGAAGTTTTTCCTGAGGATGTTTAAAAGACGTTACCTTGTTTTTTTGGGAAAGTT
TTATTTGAAGAAGTTTTTCAGGGAAGGTCAAAATAATTTACAATGTATTTCAAATAAATT
TTAAAGGGAAGTTTTTTAGGAAGATTTTGAGGGCAGCTTAAATAAATATTTTAGTATGAT
TAAAAAAACGTACAACATATATTTCGAAAAATGTTACCATGTAGTCGAAAAACTGCTGAA
AACATGTATCTTTGAAAAATGTACATAACGTATTCGAACAAACGTCCAAAGTGTTTTACA
AATATGTTTTGAGGGAAGTTTTCTGAATGAAGTATTTAGGGAAGCTTTGAAATATGTTTG
TTGTCATCAAGAAATGTACAACATGTATTCCAAAAAAAAGTTACCGTGTATTAAAAAAAG
TGCTAAAGACATGGATTTAAGAATATATATATTGTCCAGCAGACAAAGGTGAAAGATTGC
ACGAACAGAGACACGTCACGTGTTCTTTTCTGTACTACCGTGGGGTGTCATGAGACGATA
TAGCGGCTGCATGATCTGCTTGCCGTCACCCACCGTGATATTCACACATCACGGCGCGAA
TACGTACGATCGATCCATCCATCCTAGGGAAGCTTGCTGATAGATCATGCATGGTCATCC
ATACCTTTACCTACCAACAACGTGTCCTATATAGAAACACAACAGTCCGTGCGTGGTGGC
AGTGGCAGTGGCAATGGCAATGGTGTCCAGCATGCAGCAGCCGGCGCTGCTGCTTCGGCA
GCTGACGCAGGACCCGGTGACGGCCTCCCTCCTCGCCGTCGCGCTCGCCACCGCGGTCCT
TATGATCGCCGCCGTGAGCAGAGGCGGGGGGCAGCGGAAGCCGCGGCTGCCGCCGAGCCC
GAGGGCCCTCCCGGTGATCGGGCACCTGCACCTGGTGCGCCCGCCGGTGCACCGCACCTT
CCACGACCTGGCGGCCAGGCTGGGCCCGCTGATGCACATCCGGCTCGGCTCCACCCACTG
CGTGGTGGCCAGCTCGGCCGCCGTCGCCGCCGAGCTCATCCGCGCCCACGAGGGCAAGAT
CTCCGAGCGGCCGCTCACGGCCGTGGCGCGCCAGTTCGCCTACGGCGACGACGGCTTTGC
CTTCGCGCCCTACGGCCCGCACTGGCGCTCCATGAAGCGCCTCTGCATGTCCGAGCTCCT
CGGCCCCCGCACCGTCGAGCAGCTCCGCCCCGTACGCCGCTCCGGCCTCGTGTCCCTGCT
GCGGAGCGTGCTGCACCGGGCGTCGGCGGGGGCCGACGCGGTGGACCTCACCGCCGCGCT
CATCCGGCTGTCGAACACGTCCATCATCCGGATGATGGCCAGCACGGTGCCCGGGAGCGT
CACGGAGGAGGCGCAGGTGCTGGTGAAGGCCGTGGCGGAGCTCGTCGGCGCGTTCAACGT
CGAGGACTACATCGCCGTCTGCCGCGGCTGGGACCTCCAGGGCCTCGGCCGCCGCGCCGC
CGACGTCCACCACCGCTTCGACGCGCTGCTCGAGGAGATGATACGGCACAAGGAGGTGGC
CCGGGAGGCCAGGAGGATGCGTGGTGGGGGAGTGGGAGAGACGCCGGAGAAGAAGACGGC
CACGGGAACGACGACGGAGGGCAGCAAGGACTTGCTCGACATCCTGCTGGACAAGCTGGA
GGACGACGCGGCGGCGGAGGTGAAGCTCACCAGGAAGAAGATCAAAGCCTTCGTCATCGT
AAGACCAAAGCTCTCAATTAATCTTCGTCATCTTCTTCCACCGTTAACTGAATTTTTCTC
GAGCAAAAACGTGGATGCACGATGCAGGACGTGGTGACGGCGGGCTCCGACACGTCGGCG
GCGATGGTGGAGTGGATGCTGGCGGAGCTGATGAGCCACCCGGAGTGCCTCCGCAAGTTG
CGGTCGGAGATAGACGCGGTGGTGGGGCGCGACAGGATCGCCGGCGAGGGCGACGTGGCG
AGCCTCCCCTACCTGCAAGCAGCGTACAAGGAGACGCTACGGCTACGCCCGGCAGCGCCG
ATCGCGCACCGACAGTCGACGGAGGAGATGGTCATCTCCGCGGCCGGCGGGTTCACGGTG
CCGGCGGGCACGGCGGTGTTCATCAACCTGTGGTCGATCGCGCGCGACCCGGCCAGCTGG
GACGCGCCGCTGGAGTTCCGGCCGGAGCGGTTCATGGCCGGCGGGCGCAACGAGGCGCTG
GACCCGCGCGGGCAGCACTTCCAGTACCTGCCGTTCGGGAGCGCCCGGCGCGGGTGCCCC
CGCACGGGGCGGGCGGCGCCGCTCCGCGCG