Contig Data
morexGenes
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Map Locations of contig_159752 (1998 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_159752

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21677 1 869 bp MLOC_21677.1 Available Available LOC_Os02g42450.1, FRAME:+2, EVALUE:3e-92, 13102.m04706 protein RIPER1 - Ripening-related family protein precursor, expressed





CDS Structure of MLOC_21677






Contig Sequence (1998 bp)

>contig_159752 1998 assembly3_WGSMorex_rbca.fasta
TACTAGAATTAAATTAATTCTTAACATAACCGAGTTCCCTATTCTCGGCCGATATTGCTA
CGCATTGCCTTGACATTTCCATGTCGCATCACCATCTCTGTACTGAGGCCTGTTTTTTTT
TAAAGTTGTAGAACTTTTTTTAATTTTAACTAAAAAGTCTCTAGTCCATACTCGTTTTTC
TGCAGGGACTAAACAGAGATTAAAGGTTATTAAATGACATACAAAAAGATCATGTTACTT
CTAGTTATATATACTAGAAATTATTAAATGACATGTTAAAATTAGGCATTGTTGAATTTT
TTTATCAAAAAAGTCTAAAAACCCCTTTTATAAAGACTTATTCCTTTAGTCCCGCTGTAA
TGTACATTAGTACAGACGCATGGTGTCGATTACATCCATACACGTTATTTATAAACTCCA
TTGGAAATAAATCATACAACAGGCTGTCTATTATGCCAGCTAATACTCTAACCGTAGGTG
CCTATCCAGTCCATGATGTGCGCTCAATCCGTGCGTGTGACTAGCGACAGACTCGGTACA
ATGGAAAACAAGCCGTTTGTAAACAGCGATTTACACGACAAAGATACTTCTGCAGACAGG
CTAAACCGATTTCTCCTTTCTCTCTTCCCCACGTCATTTATTTCCGGCTTTCATCACAAA
CTGACTGTATAGCGTTGTACATGGCCTAAAGAAACAAACACTGCCTGACTACTGTCCTGT
CCTCATTCCTTCGCCGCCTTGCTTGACTTTTGAGGCATTTTCCTTCCAGCACATGCAAGA
TCACACGGGGCACAAAATACGAGCCGTAAACAAACACGGGAGCACGAGCACCGAACCAAC
ACGCATGCCGCCGCCGCTGCCCTGCCTATATATAGAGAGAGCCGGCCACTGCAGACTCCC
ACGAGTCACGACTCACACCCGTCCATCGGCCATCAAAACTTCACAGAGATGCTGAGGTCC
ACCGGCCGCCTCCTGCTGCTCGCGCTGGCGGCGAGCCACCTGCTGCTCGCCGCCGCCGGC
GCTGGCTGCGAGCCGAGCGGCTCGCTCCGGCCGAGCCGGGGCCACTCGTGCCAAGACTGC
TGCAAGGCCGGGCAGGCGTACCCGACGTACAGGTGCTCGCCGCCGGTCTCCTCCTCCACT
CGTGCGGTCATGACGCTCAACAACTTTGACGAGGGCGGCGAAGGCGGGGACCCGTCGGAG
TGCGACGGCAAGTTCCACCACAACTCAGAGCGCGTGGTGGCGCTGTCCACGGGGTGGTAC
AGCGGGGGCTCCCGCTGCGGCAACAACGTACGGATCCGAGCCAACGGCAGGTCCGTGCTT
GCCAAGGTCGTCGACGAGTGCGACACCCTCAACGGGTGCGACCGCGAGCACGGCTACCAG
CCGCCGTGCCGCAACAACGTCGTCGACGCCTCCCAGGCCGTCTGGGATGCTCTGGGCATC
ACCGGGGAGGAGGTCGGCGAGTACAACGTCACTTGGTCGGATGCATGAGCATGAACTGCG
TGGCCGCCGGTGCAAGTGCAACTAGCTAATGTAAGGTGTATGCCCCCTCAAAATAAAAAT
AAAGATGTAAGGTGTACGGACGAATAAAAGTGCACATCCGAACCCACGTCTTTTTTTGTC
GCTAGCAAAAACGCCCCTTGATTGCAATGGTAGAAAATACAAGCAACTTTAATGGGACGA
CCCATTTCATCCATCGCCGTTCGTTTGGATCGGCACAGACACAAAAGGCGGTTCAAAACG
CCGACCCAAACGGACGCGCGTCCGGTTTTCGTCCGCGGGCGACTCATTTCCGGTTCATTC
TGGAGCCGGATTTGCGTCGGGGCGGACACGCGACGGACGCGCGTAGGCTCGCCTTCTCTT
CCTCCGGGCCCGCTTGTCAGAGGCACATTTGGCCTCCCCACATCTAAGCCTCGCCCGCCT
CCTTCGTCGCCGACGCCGTCCCCCATTTTTGTGGCGACTCTGCCATCCTCCTCATCCGCC
CAGCAACGCCGCCCACTC