Contig Data
morexGenes
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Map Locations of contig_159737 (5060 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159737

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21667 1 2703 bp MLOC_21667.1 Available Available LOC_Os01g58830.1, FRAME:-2, EVALUE:2e-93, 13101.m06250 protein transposon protein, putative, unclassified
MLOC_21666 1 2390 bp None Available Available LOC_Os01g34330.1, FRAME:+3, EVALUE:4e-32, 13101.m03455 protein BAH domain containing protein, expressed





CDS Structure of MLOC_21667






CDS Structure of MLOC_21666






Contig Sequence (5060 bp)

>contig_159737 5060 assembly3_WGSMorex_rbca.fasta
TATCTCAATGCTTCTACAAGCATTTTCCAAGTTGAGTTCCATCTGGTTGGTGTATCAACA
GAGATACCTTTCTTTGAAGGCAGGCCCATCCCAATTGCAATTGTATTGAATTCTTGAAGC
CTTGAAGAAGAGTCAATATATTTCAGCACCTCACGTACCTTGTCAATAGCTCCATGGATT
ATTTTCATTCCATCCTGAACCAAGATATTAAGAATGTGTGCACAACACCTGACATGCAAA
TGTTGACCTTCAAGGAGTAGCTCATGTTTGTGATATTTTATTAACTCATCACATGCATTA
GTGTTATTACTGGCATTATCTAGTGTCAAAGTGAATAGCTTGCCCCTTATGCCCCATTCC
GTTTCTTCTATCGCATAGCCTGTGTGGGGATACTTCACGTCTGTGAAACTTATGATCTTC
GTGTAGTTGAATTCTGCATTGATATAATGGGCGGTGATGGACATGTAGCCCAATTATGTG
ATGATGTCCACATGTCAGATGTTAAGCAAATGCGGGAGTCCAAATTTTGGAGCTCAACTT
CAATATCTTTCTTCATTCCCTTATACATCTTCATTGCATCATCACGAATCGTGTGACGAC
CCTTGATTTGAAATGCTGGCTGCAATGNNTCAATCCATGGCTGAAGGTGTGGATCTTCGA
ACTTAAGAAAGGGGATCTCAGCATGGATGCAAAACTTGACCATTAGTTCACGACTAACTT
TTTCATCAAACACTAATAGGCCTCCAGATGTTTTTTTTCATGGTCAACAGAAACCTCTTC
CTGCAAGTATCCTCAATTGATCGGCAAGCCTCTGCAATATGGGTTCTCAAACTGCTAGTC
CCAAATTTGGTGTGAAGTTGCGCTTGACAGTATTTCCACATGGCCTTGAGGTCTCCTACG
ACAACCAGTTCTTGTTCATAGTGATCCCATACTTTGGACCTTCTAGCATGTGGTACTTGA
CTCGTATCCTCATCCATGGAATCGACAATCTCAGAACCCTCTGAGGTAGACATGCCTCAA
ATTTTTAGAGCACACTGCATGGGAAAAAACCAAACCATTTAAACCACTTTTTCTATTATC
ATTCTCAGATTTATTCACAGGAAGCAAAGGCACAAATTGAAGATCTGATAGACTGACTGG
ATGTCAAAGAAACAGGGGCGAGGGCGGAAATGGATCGATGGGTCTGTACCTGCGGAGGGG
ATTGACTGGGGTCAGGGCGGGGATCCTCGTTGCAGCTCCAGCTCCTCAGCCTTCCTCGGG
AACTTCACGACCGCCTGCTTCAGCTCGCCCCCAGCGCTGGTGTTCGACAACACTACTCTG
GCTCCTTCAACGACATCTCCGTGCGGGGGCAGTGGCGAGCTGCGCGGCGCGACTTCGGAT
CGGGGAGTGGATGGGAGGAGATGTGACGTGCGTCGGCCGGCGGGGAGGAGGTGGTGCGGG
CGTGCGTCGGCCGGCAGGGAGGAGGCAGGCGTGCGGCGGCCGAGCCGGGAGGGAGATTCC
CTTTTCTTTGGTCTTGGTTGCTTGCTCGCAGTTGGAGGCGAGGAACTAGGGCAATAACCT
CGTCGCGTACGAGCTGGAGCTTCCTGCGGGCGCCAAGGTTCACCCCGTCTTCCACGTCTC
CCAACTGCGCTGCGCCCTGTCACCGACCACTCCGATCGAGCCTGAGCTGCCAACGCCCAC
TGACGAGCCCCTGCGCCCAGTCGAGGTCCTGGACATGCGCTAGCGCCAAATGCCCCAGGG
ACGACGCGAACAAATGCTCGTACGCTGGTCCGACCCACCCGTCCTCGACGCTACCTGGGA
AGACAGCCATGTTCCTCCGCGAGCATCACCCTGCACTGCTCTCTCTCAAGGAGGAGGGGA
TGTCAGCGCCACTGCTGACAAAGCGACAGACCCTGCGGTGAACCACGGGTTTGACCCAAG
CGCGCCTCGAACAGGCCGCTTCAGATAGCGTAGCCCAACAGGAGATACATCGGGCCCGAG
TGGGCAGACTAGGGCTTGTCACGCCCAGACCGGCAGCTACTTATACTCCCATGCGCGTCG
TGTCTGGCATCCAGTTGGATCAGAACGAACGNGGCATCCAGTTGGATCAGAACGAACGTT
GGCTCTCTTCCCCTCTCCTNCCTTCCTCCTACCGTGAGATCCGCGAGACTGTCTCAGTGA
GACTTCGAGTTGTAATCGAGATTGATACTTGTATCCTGTCTCAAGCTATAGATCGATTGG
CACCTAACACCAACGGCTGCTAGCCGTTTACCAATTCACAAAAAAGGTATTTATAATCCT
CAGGTTAGAACAGAATCCCCATTTGCATAAAGGGTCGATGGCTGATGGGCTCTCTTGCTG
GGCTGGCCCTCCCTGGTGATGAAGGTTGCACTCGTGGCGTCCGTAGTTAATGTAGGCCCA
GTGCTAACATTGGTTCCCACCAGGCCATCACTGTGACTGAGCTGCCATACCGTCGCTATC
TTGTCTTCGCCTCTTCTACTTAAATCTGGGCTACAGATGAGAAGATGGACATGTGGGGCT
GGGTTGGCCCGTTTGCGCTTGTTCTCTGTTCATTGCCTATTTTGCCTGTGTTCATTTGAA
ATGTATCACTGTTAATATGGACAGTCTCCAAGATGCAACTCCAACCATTACTTTATGTGA
ACATATTATTAAATTGTAGAAAATCACATAATTGTGATTTTTTCATGACAAATCAAACGT
ATTACTCGTGCTATTATTTTTGACTAATATTATTGTCACTTAACTAATCTCAACTATCAT
TTTATACATATATAGTCGATGTTAGATAAGTTTGATGGCACACCTTAATTAGAAGCTTGG
TAATTGTATAGTTGTCTCAGATTCGTTGGGATCATGACTTATCGCGGCGAAGAATGCAAA
CTTTGACCTGCATTTTTAGTCAGCCATGACACATGGTGTGTGATCCCATTCTTTGATCTG
ATTAACCAGGTTCCTGGTAACTATGGGCTCGTACCTGTTGGGAAATCTTTCGGTAGTCTG
AGTGAGTGGGCACTCTTGTGAATAAAATGCCTTACCGCTCATCCATATAAGGCGAACCGA
TTCGTTATATTGCTGAATTTAATTTATGCTAAGTGACACCATCGCGTGATCAAATCATAG
AACAGGTAGTCAACTACAACTAGAGTTATAACATACGGTGTACTCCCTCCATAAAGAAAT
GTAAGAGCGTTAGTGATCTAAACGCTCTTATATTTCTTTATGGAGTGAGTACTTGTTTAG
CGAATGCTGAATGCGTGTACATACATTGGTAATAGTATTACTTATAGAGTTCCTTGGTTT
GGCTTCTTATTGGAGGGTGGCTGTTGAGCATCTGTTGGAAAGGCAGTTCATTTTTGCTAG
ATCAAAACTTAATAATTAAACCTCAAATCAAATCGTTTGTAGTGTATCTCATCTATAGGA
GGCCTGGAGAGTTGTTAACTCAAGGAAGTGGAGTCGCAACCACTTTTCCTCTGCAGGAAG
TGTATGCAAGGCTGATTTCTGAAGGATAAACTTCATCTACCTGTCTATCAATTCTTTTTC
CTAACACGATTGTAGTAAGCCTGAATTTTCCACAACTGTCTCATAGAATTTGCCTCTCTT
TTTCAGCTCGAATGTATTTCCTGTGGTTACACATGGTTTTCGTCAAGAGATGCCATCTCA
TCGCTGACGGTCGATACTCCAAGTTCTGGTGGGAATGTCGGTACCGCTCCCTGGGCGACA
GCAAAGTTTGATGTCCTTCAGAAGCAGCTAGTGAGCCCTCGGGATCAGCCAGACAATAAG
GCAAGTGCTGATGCTCTCCAGAAGAACGCGGTGGCATCCATGCCTAAACTTGAGAAACAG
AAATCATTCATCAAACCGAAGCCAGAGGAACCCTCTGCACCCACACTGGAGAAACAGAGG
GCGTTCACCAAGCCAAAGCCGGAGGAACCCTCTGCACCTTCAGCTAGTCGTGAGTGAATG
ATCATGGGCATTGCTATGTTTCAGAGATTGTACCCTGGCAGCTCTTAAACATGCCAACCT
GCAGTAAAGCATGAATAGGATGACAACACTTTCTTGTAGTCTAAGGTTGAGGCAGTTGCA
CAGCGTGTGTGTGACCATCACTCGCGGAACTAGCTTCGCATGCGCAGGCTAAAACTTTCG
TTAAACTAGTTTCATACTTCTAGAAGCTACTTTTGATCTCACTCTTGTTACGGTTGGCAC
TAAAAAACAGTGGGGGGCAAGTGGTTAGCTCTTGGTGATTTCTGTTCCGCCGTCGACGAG
GCCGAGGTTGGGGAGCAAGAGCCACCGTATTAGATGAAGTAGTCAAACATGCAAACACAG
AGAAGTAGAGAGGGGAACTATTTTATTAATGATTGATCTATGTTACAATAATTGCTCCTC
GTCTAAATATACAGGGAAACACTTTGTATCATAAGCCTGATACATTTCACTCGTCAGACG
AAGCAACATCGTTGATTATTTTGTATCACACGGCCGAGAGCTCCCAGCATATCTCCGTAA
ATGTCGTTCCCCAATTATTTGAGCTATTCTCCGTCTACATGGCTAATTATTTGAGCTATT
CTTCTCCGTCTACATGGCTCCTGTCATGCACCAAGCCGCCGATCTCCCGATTCACAACGC
ATTTTCAATTCTTCCACCCCGCGCCTCCTAGTTCTTCTTCATCAACTCAATAGGATACGG
CGCGGTGCCCCCATATTCAGCAAGGTGGCCGCCGGTGTGGTTCACGTGGCCTGCAGATTC
ATTACATGGGTGGGAGGATTAGCAACCATGAGGATCAGCGCTGTCCCTTTTCAATGGGTT
TATTCACCTTGTGTGTCGGCTCTATTCGGAATCGGCAGTGTGCGCGGCAGATTGCAGGAA
ACGGCCATGCTTTCCTCCTCTGATCTAGGTTACCTGTCACCTAATTTAGCCTACTTCAAA
TTTGTGCAATATAAGCAATTTATTTCGCTTGGTCCTCAATTATTTGAGCTATTCTCCGTC
TACATGGCTAATTATTTGAGCTATTCTCCGTCTACATGGCTCCTGTCATGCACAGGCTAA
TTATTTGAGCTATTCTCCGT