Contig Data
morexGenes
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Map Locations of contig_159672 (2998 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159672

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21615 2 1781 bp AK356011 Available Available None





CDS Structure of MLOC_21615






Contig Sequence (2998 bp)

>contig_159672 2998 assembly3_WGSMorex_rbca.fasta
GTTCCTAAATACAAGTCTTTCTAGAGGTTTCATTAGGGGACTACATACAGATGTATANNN
NNNNNNNNNNNNNNNNNNNNNNNNTCATTTTACTCTGTATGTAGTCCCCTAGTGAAATCT
CTTAAAAGANNTATATTTAGGAACAGAGGAAGTATGACCTTGGAACAATGCATGCACATA
GGGTCACATTCCGGGTTCAGTCAAGCCACATAGATGCAAAAAATGGTTCTATAAATTATT
TGTCAGAATAAACACCAAGGAAACATCTCCGTAACATTTCAGTATGAGGAGCTCTCTGAT
TAAGTAGAATATTGCAGTTATTAAACATATCTAAAATAACTTGGTTGAGGTAACAAGAGT
TTGATGAAATTAACCACATGGCACATCTTCATACACAACGGAACTACTTACCAAGATCCA
TTTTTACATATGAACAAATTAAAATATCTTCAACGTCTGGTTCCTCATTTCTCCATGGTG
ACGATCACCAGCCTTGTAAGCTAAATAACAACACTTGAGTTAGCATCAGGAAACAGAGAG
ACAAAATAGAAAACACCACAAAAAGTGAGTTTGAAAAAAAAAAATGAAACGGTGCACCTT
GCCACTTTCTAAACTGGCAACACAGTATAATTGATAAAATGACATGTTTGCAGCCTAGTT
TAAAAAACCGGACCGGAAAAAAACGCAACCGGCAGCCTTATCGGTTTTTTAAGCTAATAT
AAGACCGTTCTGCAATCAGACCGGAGAAAACCGGTCAGACCGGTCGGTTTTCTGGAAAAC
CAGTGAAAAATCCGGGTCATTAAACCGGGGGGAAAATGGTTTTCTGCAATCAGACCGGTC
GGTTTTCAGCTTACAAGACCTAGAGCAAGGAACCAACAAACTAAATCAAAACTGCATCAT
CAAAATTTTCTTCGAAGTGAATTTTTGTGAATTCATTTCAAATTAGAATTCCTTTCTCTA
TGTGGCCAAACCGAGGATCTTCCTTCATGGAAAGATATGAAGAGTACATACTCACTGATA
TTGCAGAATGAACTGATCACACGCTATCTTACTTTCAATATGTGTGTCGATATGACATAA
GGATGAACAAGTTCATAACCATGCCATGCTTTCTTCTCTAATGATCGATGAAATGGAGAT
ACCAGGAGTCATAACTCTAATAATTAGCTTCATCAAGCATTAACAACTAACAAACGAGCA
GTGGCAGGCATACTGTATCAGACAGCCAACATTTAGTTAGGCAAGAACACTGAAACAAAG
CTTACAAGCTTACTGCATAATAAAGTGGAATATGTAGTACTGTAAGCATCAAAATTCCAA
TATTGTGTTCTCAGTTCATGCAAATATGAATCTAGCCGGCACTTCCCCTTTGCAAGCGGT
TGCATAGTCTTCAGCGAGGTATGGTGCAGCCTCCTTGTGAGGGCATATGTACCTCTTGGA
GAAAGCAGTCTCATTCACCATGAAACTCAAATAATAGCTCGGGTCAGCCTTGAGCAATCC
ATTTTCTTTGAGAAACTTTAAAACGTAGTACCGGGGCCTGAGCCGGCCCTCTAGGCTAAA
ACAGACAATTATGGGCCGATGAGCAATGTACGACGGCTCGAACCCCACCTCGGAGATGAG
GAACTCTGACCTGCTCTGCAGCATGTGGTGAGACCTCGTGAGCAACAATGGAAACTTGGA
CACAGCAACGCCGACCTCAGAATCCGACCACCCAAACGTCTTCTTCAGGTAATCCAATTT
GGCGGCAACATTCTGCTCACCGACGAATGCGACAGCATGCACCGCGTACCTGAACATCCT
GGATTGACGGGGCACGCCGAGACCTTGGGCGCACACCATCACTGCCTGGACGCGCTCCGA
GCTGAAGGATAGCAGCCATGGGAAAGTGATGCACAGCTTGGCAATGACGCAGTGAGCTAG
CCCGAGCTCCCGCAGGAACGTGACATTGGGCTTGACCACCCTCTCCAGGTCGGACGTGAG
AAGGCCGGAGCCATGCCTGAGCGCCCCGAAGAGGTTCTCGTAGGACCCGAAGAGAGGCAG
GTAATACTGCAGCTTGGAGACCATGGATCTACGCCGGAATTTGTCGGGGGCGAGCGAGAC
GAGGCGGGTGATCTCAGACGGCGACAGGCCGAGGCCGGCGAGCCCCGCGACGACGGGGGA
CAGCGTCCTCTCCACGCTGGCGCAGAGGAACTGCGGGTCCCTGGCGACGACCGCGGCGAT
GTCGGCGCCGGAGAAGCCGAGGCCGGCGAGGAAGGCGAGGACGGCGTCGGGGTTGGCGGG
GGACTTGAGGTGGGAGATCCTGGGGGAGGCCTTGACGGTCTGCCGTCGGGTGAGGCCGCA
GGTGGAGACGAGGTACTCCTCCACGACGAAGCTGCTAGGATCCGGGGAAACGGCGGGCGC
CGACACCGTGGTGGAGACGAGGCGGTGGAGAGGGGAGACGGAGGGAGACGAGAGGAGCTT
GGCGAGGACGCTGCGCCGGAGCCGGAGCATGGCGGCGCGACGGCGAGGTGGCGCCGGCGG
CGAGGGAATGGTGAGGGTTTGCTTCGGTGTGGCGTCTGGTCCAACCTTGCTGGGCTGGGC
TGGGCTGGATTGAGTTAGACTATTGAGTATTGAGACCCATTTAGAGATAAGCTCAAATGC
CCTGCAAGAAGAACCACGCAATAAAATAAAGTAGCTAGTTATTATTATTGTTACTAGTGC
GTTGCACCGGGCAAAAAAAAATACAACTTGTTTCATGTATAAAAAAAAGACACAACTTGT
TTTATGTATAAAAATTATTATTGAGCAATAAATAAAGTTTGTGATTAGCTTGTGCACCGG
ACAGACGTTCGGGCGTTTAGGGATGAAATAGGGGTCAGACTGTAGCTCTCTTATCTATTG
TTAAAATAACTTATGTGTCACTTGGTGTTTGTACGGGTGTTATGAAGGAGAGAGGTCACA
TGTGGATGGGAATCGTTGAAAACAGAATTAACACTCCATCTGAAAATTGACGCTAAAA