| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_159655
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_21595 |
3 |
5254 bp |
MLOC_21595.1 |
Available |
Available |
LOC_Os03g64400.1, FRAME:+2, EVALUE:0.0, 13103.m07157 protein oxidoreductase/ transition metal ion binding protein, putative, expressed |
| MLOC_21596 |
4 |
2182 bp |
MLOC_21596.1 |
Available |
Available |
LOC_Os11g37730.1, FRAME:-1, EVALUE:3e-121, 13111.m03694 protein glutathione S-transferase, N-terminal domain containing protein, expressed |
| MLOC_21885 |
3 |
1325 bp |
MLOC_21885.3 |
Available |
Available |
LOC_Os02g37970.1, FRAME:+1, EVALUE:2e-30, 13102.m04166 protein DUF581 domain containing protein, expressed |
CDS Structure of MLOC_21595
CDS Structure of MLOC_21596
CDS Structure of MLOC_21885
Contig Sequence (9238 bp)
>contig_159655 9238 assembly3_WGSMorex_rbca.fasta
GAGGGGGAGGATGGTGTAACTTGATTAGTTATTGAACCGTCACTGCAACCAGAGAGTAGC
AGGGCGCAAGAAGATGTTCCTGTGGCGCCTACAACAGTTGAAGAGGAAGCTAATGATGGA
TATCATGAAGCCTCAGATCAAGTTACTACCGAACCTTGTAGGTCGACAAGGNCACGTACT
GCTCCTGAGTGGTACGATCATCCTGTCTTGAAGGTCATGTTGTTAGACAACAGTGAACCT
ACAAGCTATCGAGAAGCGATGGTGGGCCGGATTCCGACAAATGACCGAAGGCCATGAAAT
CCGAGATAGGGTCCATGTATGAAAACGAAGTGTGGATTTCAGAAGAAGTACTTGATGGTC
GTAAGGCTATTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGTAAATGTC
ACCATTTAAAAAGCTTGATTTGTCGCAAAGAGGTTTCCGGCAAGTTCAAGGAGTNNNNNN
NNATGAGGCTTTCTCACCCGTAGCGATGGTAAAGTCTGTTGGAATTATGCTATATTTTTC
AATTATGAAATCTGGCAGATGGATGTGAAAAAGTTGTTTCCTTAACGGTTTTCTTGAGAA
AAAGGTTGTATGTGATACAATCATAAGGTTTTGTCGATCCTAAGGATGCTAAAAGACATG
CGAGATCCAGCGATCCATTTATGAACTGGTGGAAGCATATCGGGGTTGGAATAAACGCTT
TGATGAGTGATCAAAGCTTTTGGTTTATACAGAGTTTATGAATAAACTTGTATTTACTAC
TTATCGTTCCTCTCTTGCTAGACCAACAAACTAGATTAAAAAAATAAAATAGGAAGGGGG
GTGGCCTATTTTATTGGACCTAAAAGGAAGGGGGTCCGGAGGCCCATTGAGTTGGTGTGG
AGGAGCAAAGAAAGAAAGGCCCATCTCATCTCTTCCTCAGCCGCTCTCCTCTCTTCCTCA
GCCGCTCGCTCGGACGGAAAAAAGGTCTCGCCGTCGTCGTCGGTAGGTCACGCGGGTCCC
CAAATCCAGCGAGCCATGGCCATGGCCAGCCTCGCCGCCCCTTCTCCGGCCTGCTGCTCC
CTCCAGCTTCACCTCCTACGCCGCCCAGCCCTAGTCCTCCTCCGAATCCCTCTCCGCCTC
CGCCTCAGCCTCCGCCTCAGAGCCCAAGCCGCACCCTCCCCTTCCCCCGAGCCGGAACCC
GAAGCCGACGACTCCTTCGCCGGCTGGTCGGACAAACAACAAGACAACAAGGAGGATGCT
GCTGCTGATTCTGATTCTCATTCGGGAGGAGGAGGAGGAGGTAGGTGGCATAATAATTTC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGGACTTGAGATTGCATAGATAGATAGAT
AGATTGGACAAGATCCCCTTTTTTATATATATTATAATTATAATACTCTATCTATCTACA
GTAGTAAGTAATTATCTAAGAGACAAACCTCATCCTATGCAAATGCAAATGCAGGGCTTG
TTGGACCTGCCCTTGCTGGCCTTCTCTTCCTCGCCGGCATCACATTCGCAGCAATCTCCT
TCACATCAACAAATAATAATGGTACGCTGCATACTTCTTCTTCTTCTTCTTACCTATGCT
ATGCTTATCACCATACGCACTGCTCCGCTTCAATTCTCATGGATAATGGAATCATACACT
ACAAGTACTCTCTCTCTCTCTCTCTCTCATTTCTATATATTGCTATACATGCAGCTCACT
CTCTCTCATTTCTATATATTGCTATACATGCAGCATCAAAGGCACCTATTCAAACCTTGA
CCGCACACTCTCAGACGACGACACACAACTCTACCCAAGATGACACTCCAGAACAACAAC
ACCAAGACCAAGACGATGCTGCTGCTACTCAGTCTCAGGTTTTGTCACCAGCCGACGATA
CCCCGGATGCCACTAGTGAGCCTACAACACCATCTTTGCCTAATAATCTACAAACAACCC
AGATGCAAGCTGAAAATGACATGGAAATCAGCACCACCAGCGACCTAGATCCGACCACCG
ATAAATACATTGCTTCCAATGATGCCACTCCTGTGTCCGACTCAGCTGAATCTCTGCTCG
CTGCTTATGACTCGTCCGGTAAACTTGGTGCTGCACAACCACACTCTGAGGACACAACTC
CTCACCTACCAGAGGAGTTATTAGACTCTCAAGCCAGCTTGCCAGAAAACCAGGATACTT
TAACTTCAGATATAATGGTGCTGGATTCAGGTGATGTTGTGCAACTATCCGACACACATT
CACAAGATAACGAGCAGAATCCTCAACTTTCTACTCAAGATGGAGCTCCTGCATCCACTT
TTCCGGATTATGTACCATATGACAGCACTGACCAGATGCTTCCATCGGGCTCAAATGACT
TACCCACTGAAGATGCTAACCAAGGAAGGGTGAAACAAGCCTCAGCATCAGATCAGGATC
AAGGACAAAATTACTTGGATAACCAAAATGACCTATTCAAATCTGCAGCGCACGGCAAAT
CTTTCTCTCCTGGAATTCCTGCTCCCTCTCTGCTCTCTGCAGCTTTACAGGTGCCTGCTG
GCCAGATTGTGGTTCCAGCAGCAGTTGACCCAACCCAGGGAAATGCATTGGCCGCGCTGC
AAGTTTTAAAGGTATTTTTTTTTATTATGTACTCAGCATCTCTTTGTTTTTCTCAGGAAA
ATCACTCATTATTTCACCCTCTCTATACTGGTCTGGATAAGGCTTCTTTGCAGATCTGTC
ATCACTAACTTACTTCTGCATTATATTGATAGTTCTGGAATTTTTTAGCTAAAGAAAAGC
TCTATGTAGTCCTGAACCCTATATTATTTGCTTACTCAAGGTCTTGGTTGACTTCCATTT
GTTTGTAGAAAACTTAACTACCCCGCTATATGTGTCTTGCAGAAATTGTTAGAACCTTCT
GTAGGGAGAACCACAACCGCATTTGCATAACTTAAACTGGTAGAAAGACGGCTTACTGAG
TTATATGGAATTATTTAGTCATACCCTTATTTTCTTTAAAGGTGATTGAACCTGGTGCTC
TACCTGGTGACTTATGTACCCGACGCGAATACGCTCGATGGTTGGTAGTTGCAAGCAATT
CTCTTTCAAGGTACATATATTTCTTTGATGCATCTTCACCTCCCATGTATTGCTGCATTC
TGCTTCTGTTTTTGTTCCTCAAGAGTAAATCCCAAATCACATTTGTGTTTCTTTAAATGA
CCCCTCTTGCTAATTTACTTGAGTAATGTTGTATCATTGGCTTATATCATATTGCTATTT
AGCTGTTGTAGCTCATCTTTTCTTGAATTTTCTGTGGATGTTGCCTGTTAAATTAAGAAG
TAACAACATGAGTTGACAATTTTTGGCTGTAAATGTAATCTGGCTCCTTAAGTGATTCCT
TGCATCTAACTAGCGTATTGACCTGGTTTGCAACCGCAGGAACACTTACTCGAAAGTTTA
TCCAGCCATGTACATCGAGAATGTGTCTGAACTTGCATTTGATGACGTCACAACTGAAGA
TCCTGATTTTCCATTTATACAAGGTGAGAAATAGAAATAGTGTTCAGAAAAAAAAAGTTA
CATCCTTACCCACATGATATCATGTTTATGCAAGCATGAGTAAATCAGTAAATCATCACT
AGTAAATTTTGGCCTCATTTATGTAAATGTACCCTCAGGATTGGCAGAAGCAGGGCTAAT
TTCTAGCAAGCTGTCAAGATCTGATATGGACATTGATGAAAACGTCCAGAACAACCATTA
CTTTTTCTCCCCGGAGAGGTAATGATGGTCTTCTTCCACGCATTCACTTGACTTTCTGCG
TGGTGTATGTGTGCGTGTGTTTGTTGTGTCCAGCTGCTAATCAGCTGTCCTTGTTGCAGT
CCCTTGTCACGTCAAGACCTTGTGAGTTGGAAGATGGCTTTGGATAAAAGGCAATTACCT
GAAGTTGACAAAAATGTGAGAATAAAAAAGTCAATATCATTTATAATTATTTGTCTTGAA
ACCGTCTGGTTATGCTGATATTAGTACTCTGCTCTGTGTCTGACCAGTCTTTGTACAAGA
CATCTGGCTACATAGACATTGATAAAATTGATGCAGCTGCATGGCCTGCTTTGGTGGCTG
ACTTGGGTGCTGGAGACCAGAGCATCACGGCTCTTGCATTCGGTAGTCTGTCTTTTTATA
ATTTTTCACTCACTTTTTGGCTGATGGACGATCACTAAAGCCCCATCTTCTTAAAGGTTT
TACAAGACTTTTCCAGCCAGACAAACCTGTGACAAAAGGACAGGCTGCCCTAGCACTTTC
AACTGGTGACTATGCTGAAGTGGTTATGGAGGAGCTTGCCCGTATCGAAGCAGATAAAAT
AGCTGAAGCAGCTGTGAACGCTCATGGAGCATTGGTCGCTGAGGTGGAGAAACAAATCAA
TGCAAGTTTTGAAAGGGAGCTTACAAGGGAAAAGGAAAAAATAGAGACCCTTGAAAAGCT
GGCTGAAGAAGCTAGGGCTGAACTGGACAAGTTGAGAGCAGAAAGAGAGGAGGAAAAGAA
TGCTCTGCTTAGGGGCAGAGCTACTGTTGAATCCGAAATACAAGTTCTTTCAAAGTTGAG
GTGTGAAGTAGAGGAGCAGCTGCAGAATGTGCTGAGCAAGAAGGTCGAGATCAACTTTGA
GAAGAACAGGATTGAGAAACTTCAAAAGGAAATCGAGAATGAAAACCAGGCTGCTGTGCA
ACTTCAGTATGAGCTTGAAGTTGAAAGGAAGGCTTTGTCTATGGCCAGGTAATGTTTTTT
TTGTGATACCTGAGACTTCTTCTGCATCAAATTACGTAGTATGTTATAGACATCCATGCT
TTTTAAACTCTCCAAACTTGAAGGTTAGAAGTAGATACTGCAAAACTAGTTAGTGCACTG
TTAAACATACTGCGTATATGTTATTCATGACACCCGTTTTAAATGGAATGCTCCTGCTTG
TACCATGATTTCCATTCACACTGGTTGTATGAGTGAGTTACTTAATATGAGTACGTATGA
CTGCCACCACCATGTCTCCAAATTGATAAATACACGCATCTTCAACCAGGGCTTGGGCAG
AGGATGAAGCAAAGAAGGCCAGGGAGCATGCTCGTGCCCTTGAGGAGGCCCGGAACCAGT
GGGAGCGACAAGGGATCAAAGTTGTCGTTGACGCAGGGCTTGAGGAGGATGCATCGGCCG
GAGTGACATGGGCTAATGCTGGCAAAGAACACCCAGTTGACGAGGCAATCAACCGGGCGG
AGTCCCTGCTGGAGAAGCTCAAGTCGTTTGCTGGTGAGATGAAAGTCCGATCCAGCCATG
CCCTGGAGAGAGTAATGCAGTATGTGAGGTCCTTGATCTCAAGCCTGAAGGAGGGAGCGG
CGCAAGGGTGCACAGATCTTGGGGCTGCTGCAGCCTCAAAGGCAAAGAAGCTGTCATCAG
AAGCGAAGGCGTTGGGTTCAAGCGTCGGGGACAAGTCGAAGAAGGTAGTGGAGGACTGCA
AAGACGGCCTGGAGAAGTTTGTGCACAGATTCAAGACAGACTAGCTGCTGGTAGGGAGCT
TTTCATGCCTTGTGTATCTGAGACCAGACAATTTATAGCCAGCCAAAGAGACAAGAAACC
GGGGAATAAATTTTGTGGCAGCTTGTGCTACATTTTGCGTCATGTGATGTTGTAGAGTAC
ATTACATTTTGGGTGTTGTTGTAAATGAATGAATGAATATAGTGAAGCAATAAGCTGGAA
GCGACATAGCAGCAGATGAGGCCAATCTTTTACTTTCGTTTCAAAAAGAAAGAAAAAACG
CATCTTGTGATTTGGATGGAACACACTGTTATATTTGGGAAAACATCACTACATAATACT
CACTCCATCTCACAATACAACATCATTTTTCATCACTTTGAGGAGTCACATAATAGGTGA
GAGGAGTGGCGACCTAGAGGTTGCGGGCCTATAGCTATGACCCGGATTTAGGGTTCGGCC
ATAGGAGTTGGATGTTGACCCCACATGTCATATGAGTTATTCTCATTTATTAAAAAAAAA
TACATATTACCCTACGTCTGTTTTCGGGTCTGTTTACGGGCTGGGTATCCACGGCTACCC
ATGCCCATGGGCAAAACCGTCATCCCTGTTATTGCCCGTTTACCTCTCTAGAGTAATGAA
ACATGAATTTTGTTGAGTAAATGCTGGAACTTGACATCACTTGAAACACTAGTATTGCTT
ACTCCATGTTGAAATGTATAAAAATGCAAACTAACAACAGCAAGGTGGTTTGGTTTTTGT
ACAGAAGATTTACAGCACAAACATGTTCTTGTTCCATGTTCTTTCACAACAATCCGGTAA
ATGTGTTCAGAGCTTGGATGGTGGTTTCAAGTGAGCATGAGCAGCAGACGACAGGCGTGC
CTTCAATTTGAAGATGAGCTGATGGACTTCATCGAAATGAGGGTTGGTGGCCTTCTTCAC
ATTCTCCATCCAAGCACGGACCTTCTCATGAGGTCCTAGAATTGTGTCACGTCTCTCATC
ACCGACAACCTGTGAGAAAATACTCTGAGAAACTTGGACTGTTGGCACGCACACGCATTG
CCAGAGACAGAAATGCAGACACATACCTCCAGCTGCATTATCTCGCACACGAGGCTGAGG
TCTGCGATCGATGGCTGGGGGTTGCCATTCAAGAATTTTGCATCGCCCTTGAGCCACACC
GTTTCGATCGTTCCCAGTGATTTTGACAGCAACTTCTCGCCCTCTTTTGCGGTCTCAGGA
TTGGGTGTGAGACCGAGAGCAGGACCCAACGCGGTGTGCAGTACATAGGATGCTGCATAT
ATAGTAGGTATGCAAAAAATTAAGATGAATCTCTTGTCTGGTGCAAGGATCAAAGGATGG
CTAAATTATTTGGAAGCAAAATGGACATGATTGATCAGGTGCAATGTTGTTTGTGCTTTA
GTTGGTTTTAGCATGTTTGAGCTGCAGTTTAGGAACGTTTCATGGTATATAAATGATAGG
TCTAGAAATAAGGTTAGCACAAGTCTTGTTCATGTGTGCATTGCATTGAATTTCGAATAG
GGGAAGGTAGGGATTGTTGACCTGCACCACGGCGCAGATTAGAGTGATGCCAATCCAAGA
CGGACTCGAGCTTAGCTCTGGTAAATAAGTCGGCTGGATACCTATACACGCAGAGGCACT
AGTTATGTACGTATATATGTTGAAGGGCAATGAAACGAATATGAATCTGAATCTGAATCT
GAGAAAAGCTTGTAGTACTAGTAGTTGTTGTTGTGAGCATACATACCAGTGGTCCGGGAC
TCCGGGGAAGACGGTGGCGAGATACCTCAGGATGGCATGGCTGTCACACATAGGAAATCA
AAGAAGAGGATTGATTAATAAGGATGTAAAACTGTCAAGTGAGTGAGTGCAATTAACGAC
GATGAAATAGTGAAAAAGAGGGTACCTTTCGAATAGTTTGAATCTTCCATCGATGATTGC
TGGGACCTGTCCCATCGGGTTGATCTCTGAACAAGAAAGGAAGAAAGATTCATTCATTCA
TTCAGAAATAAAGAAAGAAATAAAGAAAGAAAGAAAGTGACTGACTGTTGAATTCTTGGC
GTCGGTGTTGTCCCTTTGCCAGATCCACTTTGACCTCCTCGAAATCGATCCGGTTGGCCT
TGCACAAGATGATCACCGCGCGCGACGGCTGCGAAAGACGGTCCGCGTAAACCTTGAGCA
GCGCCATCGTTTCCCGTTCCCGACCTACCTACAACCACAACCACAACAGGAGAAGAAGAG
GAGAGGGAGCGAGAGGAGGAAGACGGCTGCGCAGGCAGAGATGAGAGCGTCCGTCAGATT
CACTTCATCCTTCACACACGCAAAAAAAAAAAAAATCACACGCACGCAGTGACGTCAGTC
AACAGCAACCGATTTTTTTTAAGAGACCGTCAACAGCAACAAAGCCTTTGTTACGATGAG
ACGTCGCAACGACATGCTAGTTGAAACACTTATGATGTTGGCCATGAGGCATGTGGCTTG
CAAGAAGAGGGCGGACGCCAGCCTGCGATTCGTAGGATGTTTCGTCGCCTTGCGAATCAT
TAGATCTAACACAATTAATCGGTCAGACTTATTTTTCACTTTGCAACACATGTCTTGTTA
ACAAAACTTTAGAATTAGGTCACCCAATTTTGACCAGGTCAACAATCTTTCAATGAGTAT
TCTCATTTATTTCTTTAAATTCAGATGCTTCCTAATTTTGGAGCTCTCACATTTGATTGA
CATATACAACTTTGAATTCGGGTCTCATTTTGAAGGGATCAACTATTACTCAGATTAACC
GACAACAACTAACCAATAAAAACATATCAACCCAGCACACCCTCTCACCACCTAAAGAAA
AGTAGTTCCAACATATCCGCCCGTCAGATTCCCCTACCTTAACTTCACAAAAAAAGACAA
TATAAAAAAAGTCTAATTTTAAGTTATGGAGGGCGTACTAAACAAATAAAATATGAAAAA
AATATTTCAACCCAGCAAGCACGATAAAATTTTAACGCGTCAGCAATGCCGCTTCAGCAG
GCACTGTAAAATAGAGCACATGTCTCCAGCCAGCACAGAAACAACACATACAAGATGATC
TCAAACATACAAGATGATCATCCACTTCATATTCGTCTTCATCAACTTCATTGGTTTGAG
ACCAATTGTTGAAGCCAACACCCATAGTCGGCATATATGCGTCATCATAAAAACTACAAA
GTAATACAATAAAGAAAAACTAAATCAATCTACATATGTGCACATTTGTCAACAACAACA
AAACAAACACAAAAATTATACCTTGTGAGCATTTCATCGAGCACTATGTGTGCATCGGTC
GCCGGCGCAAAAATTTGCAAGGTTTCCGACGCTTCGGGCGGTGGAGGCGCGGCCGGCCTC
ACTCCTGCCTTCTTCTTCTTTACCGTTTTCCTCTTTTTTCGGGACGCCATCGTCGTCGTC
GTGGTTCGTTTGGAGGCGAAGCTCTATGGCGCGGCCGACGGCAGCACGACGCCACCCTGT
GCGCTCATCTGGGGCGACATGAAGAGCCCGCGCGCGAGGCCTGTGTTCGGAGCCGCAGCG
GCGTCGACGGCGGGGACGTCAAGCCCGCCCTAGGGTTTACGGCGGCGACGGAGAGGTCAC
GCGGGTATGCGGGGGGGGGGGGGGGGGGGGGGAGGGTTGGGGCGCCCGCCCACGCGGG
