Contig Data
morexGenes
Links



Map Locations of contig_1596097 (2687 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1596097

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21550 1 324 bp MLOC_21550.1 Available Available LOC_Os08g20480.1, FRAME:-3, EVALUE:2e-19, 13108.m02133 protein OsFBO20 - F-box and other domain containing protein





CDS Structure of MLOC_21550






Contig Sequence (2687 bp)

>contig_1596097 2687 assembly3_WGSMorex_rbca.fasta
GGAGGGGAGGGGTGCCGTGGAAGGTGCGGTAGCGGCGGATGAAGCCGGGGTCGCAGAGGA
TGCGGAGCCATGTCTTGCAGACAAGGGCGGTGCGGAAGAGGTGCTCGGGCTCGTCCGGCG
GGAGGCGGAGGAGGATCTCTTCGATGACGTCCCCGATCAGCGGCGGGGGCGGGATTGACG
GCGCCATGGTGGACGGCGGAGCGGAGCGAGGGTTTTGGGTGGGGATTGGGGGAGTCTTTG
AAATGAGGATTGGGGAAAAGTCGGAGACGCAGGGGCAGGCGCACACTCTTCTTTTTCGGC
GCCTGAGTTCGACCAGAACCGGCTTGATCGCATGAGTTTTTTTTTTAACACAGTCGCAAG
GGCATATACTCATCCCTATAAATATAAAGGGAAACACTTTAAATCAGTAGTCTGATTAGA
AGTATCCTTCAGACCGATGGACTGCCGTTGATTCTAACTGAATCTTGCGGTCCAACAATG
TTATGTTTTCAAAAATAAAAAAATGCCATCTCGTAGCAAACCTCCTGCATCCATCCATAA
ATCCCTCCCAACAACTCGGCCGGATATCCCTCCCGAATCCTCTCCTTCTCTCACGCGCCC
GCACGGCGCACCTCCCCGATCTTGTAGTCAATGGTAACACCCTATCCTCTCTGATGGCAG
AGCACATCGCGCATTCCTTCACACCTCGTCGTCAGCCACAACAACGGAGCAGTAATCTCA
CCGTCCAGATCCGTTCCTCTGCTCTTCTCCACCCCTTCGTCTCCACTAATGCGAGTATGC
GACCCCAGGCGACATCGTTGGTGCGCCATCCCGTTGATAAGGGGTCGAGACCCTATCTCT
TCTACCTCCGACCACCACAGAAACAGAAGTTAACACGTGTGCTCCTCTTCCTCACCGATT
TTCTTTGTAATGTTACAATGATTGAATTATCTTATTCTTGATTTTTATGTGCTTGATCAG
TAGGAGGCCACGATGTGCATCCTAGCAAGGAGGCTCCATATGCGTTGGTGCCTTCGCCTC
TAGCTCCAGCCCTTCTCGACATTGCCGAGAGCACGCCTGACCGACTGCAAAAAACGATGC
CTCGCGTCCTCGGCTCAGCTAGGTTTAATTTGATATACTCGACCAACCTACTTTGTTGTA
AAGGAGGCCCTCGGCTAATGGTGTGCATCCTTGCTGCAGAGCCGCTCCATCCATGCATGC
CACTCTTTTCTATGTGCAGTTAACCATGGTCCATCAGGATAGAAAGGAAGCAAGTCCACC
ATCAGAAGGAAGCACGAGTACTATTGAAAGAAGCACGACCAACATAAGAAGGAAGCACGA
ATAGCATGCATGTCAGAAGGATGCACTCCCCCCATCAAATGAAAGCATAACTACCATTGC
ACGGAAGCACGACCAACGTCGAAAGGAAGCATGGTTGACCATCAGCCCGATGGTGTTTAA
GTTGTGCCTTAGATGCCACAGTTTTGTTTTATGGAAGCAAATCGTGTCAAACCAAATGTA
GTGTTTCAATGATAAATAATTCTAATTGGAAATAAATATCCTTGGAAGCAATTTAGTGGT
ACATTGCAAACAATTCTTTAGCCTCTGAAGTATATTTTACCGCATAAAAAACAAGATAAA
TATGATGGTGCATTGGACATAATATTTTGCCAAAATGGAAACAAATTCTCTAGCTGACGG
AAACAAAATGAATTGTTGAATTCCTAGCCCTCCCTACCAGCCTATATGCTTCAAAGCAAA
AAAAAGACATGTTTCCACCTATCACAATACGAGTTGCTTTCCTTGGTGACCGCCACACAA
GTGCAAATGCACTGCTTCAGACGCAAGTTCAAATACATGCCAAAAGAATTTATAAAGAAT
TGAAGCACGAGGCATCGAAGAACAAGATGAAAATCCGTTTCAAAGCAAAAAAAGCTCACA
GTGAAAGTAGTGAGAAAGAAAAGAGATGAGTAAATATCGCTAAATAGATCTAACGTGATT
TAGGGCAGTGATTGTTAGGAAATAAAGTACATGCAAACTAACTTCATCCAGACCCACAAT
AGACGCTACTTGCCAATCTCCAAGCTATAGGAAATTTAATTGAAATTTAATTCAAGGATC
GTGGACTAGTCTGATGGGAAGCAAGGCATCAGACGTCTGATGCCTAGTGGCTCCCAAACA
TAAATGCACACATCTTCTTTCTATGAGTATTTTTAAGAGATGGAGCCGGCATATCATTTT
GAAATTTATGGCATCTCGTCATTGACAGAAACGTCTCCTTCCATTAAATGTGCATCGCCA
CAAATCCTGAAATAAATTAGAAATAAATACAAGCATCAGAATTTAAACTCTAGTGAACTA
AGGATACCACGGGTCCTCTAACCATCTAACCATAGGTTGGTTTGCTTGAGCGCATGAGTT
GGCTCATCATGGTTCATATCTACATCCCGGTCTCTGGACGCGCCCTGGAACATTTAGTGA
CCGAATACGTCTTAAATAATCTCTTTCACAATAATATACCTTATTTGTAAATCCTTAAAT
CCATATTATACATGTACGTTGAAAAGATCGATATGGTTGACTAGAAGGGAGGTGAATAGG
CAACTACTAATTTTTAGCTCTTCTTAACAAGTTAGAGAAAGAAACACAAAGATTCTCTAA
ATTAACTACTAGGTGAGCAACCTATATGATGTTAACTACCATGACAA