Map Locations of contig_159597 (7884 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159597

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21535 1 2372 bp AK360995 Available Available None





CDS Structure of MLOC_21535






Contig Sequence (7884 bp)

>contig_159597 7884 assembly3_WGSMorex_rbca.fasta
TCCGTATGTAGTCTTCTAATGGAAATGTAGTCTTCTAATGGAATCTCTAGTAGTCTTCTA
ATGGAATCTCTAAATCTTCTAATGGAATCTCTAAAAGGTCTAATGGAATCTCTAAAAGGT
CTTATATTTTGGAACGGAGGGAGTACAATACAAAGGAACAAACATGACCTTTCTATTGTC
TGGAGGCAGAAGGGGAGTTTTTCGGTCTTCTAAGAAGATATGGAAACGCCGAATTCCCTC
ATTTATAGTCTCTTCATGCCCGAGCTTGACAAGGGCAATCAAGAGCAGTGATCTAAGCAT
TACATCAAGATGGCTCTCACCATCCTTAGGATCCCAGCCTACTCTTCTGAAATGTGAAGT
GCATGAAAGTTTTAAAATTGTTGCACCCGGGAAACAGAAGAAAAATTGTAATGAATAGAA
AATCACACACAAATATATTGAAAATAGGTACAATATTAAGCTTGTCGGCATACTTGGCAG
CTAACAGAAGAAGCTTGATCAAAACTTGTTTGATATCTCTAGACAAGTCAGGAGTAGCAT
CAGTTGATATTTTATTAACGCTTAAACATACCTGTGAATAGAGAAAATACACATGTGATT
ATTATAATCTTGAAAACAAACATTAGTCACATGCGTAAAATGAAGCCACGAGGCTATGGA
TTCAATTGGAGGTGTAAGGTTACTTACAGAGGTTACATGTGAAAGTACAGTATAATCAGA
CTCATGACGATAAGCATTTAGTAAACGAAGCAATGATGTCAGTGTTTGTTTGCAAGCAAC
AGAAAGAGCATAAGAATCTTCCACAACACCTACAGAACAATTTATTTCATTTGTCAAAAC
ATTTTTTAAATATATAGAATAATGTATCTTAAATCATATTGTCTTTACCGATCATATCCA
TTAAAGAGAGTTTCTTGTCTTTTATTGCATTTTCAAGTCCGGCTGCAAGTTCATCATCAT
ACTTCACTCTATAAAATCCAGTTTGATCAATGTTCAGTTTGATCCAGAAATTTTGGCCAC
TTTGGGAGGCTGCAAAATCTTTTATATGCATCCTATCGGTCTTGCCTTTCAACAGAAACT
TCTTATTCACATCATAAGAGCCACAGCATGCTGTCATAGGAACAATCCACATGCCAGGAC
CAGATGATCCATCAGACAAAAACTGAGCCTGAAATAAAGAAATGGTAATTTATATTTAGG
AATTGCTTGAAACTAAGAAGTAGCTTCATTTCCATCAGAGTTAATATTGGTTTAGAGAGA
TTGGCTGCATTTGAGAATATAAAGCACATATAATACTCCAACATCCAAGAACCATGTGCA
TTGGTATGTACTACTCCCTCCATAAAGAAATATAAGAGCGTTTAGATCACTGAGGGAGTA
CATTCTAACAGCTTTACTGATATACTCTTTATTTTTCCAATGGCTTTACTGATATGCTTT
TTGCAATGACTTTACTGATACAATCTCTATATTTCTGATTGAACAGATGATCATACATAA
AAACAAACCCCAAAAAGGACAACACTGTTCACATTTCTAGTCATTGTTATTCTGAATTTT
TTTATTAAAGTACCTTGCATGTTGGTTCTAATGTGTTCCGTGGTCTATGTGAGACTGTGT
AGCTAACAAAAGAATGAAACAATGGTAGATGATGTGGTGTAGGTAGATGGCCCTGGACAG
AAAAGTGTGACGCCCAACCAAGAGGAGGCTGCAGCACAACAAGAGCAGGGGAGAAACTTG
GGGAGAATAATTTTGGGAAATAACTAACTTGAGAATCAAAAAATATCTCTAAGAGATTTA
AACAGCTAAAAATAACTAGGGATACTTAGGGCTTGTTTGGTTCTAAGCCTTGCAATGCCA
CACTTTGCCACACATTTCTTGTCAAAACTTGCCAAAGATTTTAGTTCAATAAAATGGAAG
CCACAAGTTAGAAAGCCTAAGGGAATCTTGCCACACTTTTTGAGTGTATGTGATGTGGGA
CCCTAGTGTGGCAAAAGGCATCTTGCCTAAGGTGAGCCTTGAACCAAGCACCACCCTAAG
TTGTCAAACTTGCCTAAGCTTTGGTCCGGTAACCTTAGTCACAAACTAAACAGCCCCTTA
GTCATGGCCTGTAGGTCTAGCCGCCCATGACAATAAGCATGCGACTAAAGGTACCAATAG
AAAAGGGACGGCACTTCAGTGCGACGCCGCGTGAGAGACAGACATCCAGCTGTGCCAGCG
CGAGTGTGCGTCCGCATCAAGCCACAGTGCTAATCACAGGCAGCTGATCAACAATGCATG
GCGCGAACATTCTCCCATTACAATATCCGTAGATAAGAGGTCCTAGAAAGAAGCAATCAT
GAATTCATGACCAAGTTGCCAATCCAAGTATACTTTAGATAAATTCATAACAAGGGGAAA
ACATAGGTCATGCATGCATATTTATACCCAGTTCTCCATGTATAGTAGTAAGAAACAATA
TGCAAATGAAAAATCTGTCCCAAAACCTGCTCGAGCTCCAAATCTTGCCCATTTAGTTTT
GCATATATAACAGGATATCCTTGTTGCTTAGTCCATGTAGTCATCAGATCCTTGACAGGC
TCCCCAGTTTCCTCCTCAAGAACAGCCCATAGGTCTTCGGTTTTAGCGTTTGAGTATGCG
TACTTCTTTATGTATGAAGCCAAAGCTTTCTGGAAGAGTAAAGAATCACAAAGTTGAAAC
AATCAGAAAACTGTTTATACTAGGCAACAGAGCTAGATAGAACAAAAATCATAAATGCAA
TAGAATTAATCATCCATATTTAACACACGAAACATCAAAGTTCAAGCTATTCTTCAGCAG
ATGCACCACGCATGCTCATAATGGGGTCAGCAACACAGTCAAATCTAACAATTATAATCA
TCTTCAGTATTTTGGTTTCAGATTATGAATGCATCTAAATTTAAGATGCAGTGCATCAGA
GTGGCAGCAGAGGCATCTCGCATCACTTCTTTAATGAAGAAAAAAAATATACATGCAAGG
GTTCAGAAGTGGTACTGTACAATGGCAGCAAGCCACAGCAGCCAACACAGGAAACATAAT
GATGGACTACTGTAGCAAACAAGATTCCAATTTCAAGAAGAAACATTATTTAACCTGGAA
TCGCTCTGCACCAAGGTAGCTTTGTAGCATGCGAATGACAGAAGCTCCCTTGTCGTAGCT
TATGGAATCAAAAATCGCATCGATTTCACTCGCATGGTTTACGTCAACCTGAACAAACAG
GTCAAATAACCTAAATCACAGCTGACACAGTTGGAGATGCTAATACTGGAAGAATGATAA
ACAATACTTTACAACATTTTCACACATTTGGAGTTCAGTAAAACAATAATAAAATATAAG
CATGGCATCAGAAGAATTCAAACAGACAGATGTTAAACGTCAGAGTTAATTCTTCGGTGG
CCAGGAAAGGTAATGCATCAATCGTTGCTTATGTGTGTGCAACCCATCAACTTTGTAATA
TTTATTTAACTTGCTGTCATGATATATTTCCACATCCCTATTGCAAATATGTGCAGCATT
TGTTGAAGTTGGAGCACTACTAGCAAAATCTGTTCTTACACAGAATAATGATCAAACAAA
TTGAAGCAAGCACTTGCACCGACTAGGAAAGAAGATTACCTCAATAGGATGAGACTCTGC
AAGCGCATCCAGTCTGAGGCCAGAGGTTGTCTCATCAAGGAATTGTGTCCAGTTATTCCA
TTCAGGAAATATAGATTCCACAGCTAAATAACTCACCTGTTCAAACATAATGACTTGTTC
AATAATAGGTATACACAACATCAGGTCAACATTAATAATTTCTCAAATAACGGTTATCAG
ATTGATTACCCACGAAGCGAAACCCTCGTTTAGCCACAAGTGAGTCCACCATTCCATGGT
TACAAGATTGCCAAACCATTGGTGAGCCAATTCATGCGCGACGGTGATTGCTACCTATAG
AACATATATGTAAATAAACAAAAGAGATTTACTTTGGAGAACATTCAAGTAAAACCCAAC
TGACTCACTATTAGTCAAAGAAACAAACGAACTTGAATGAAAAACAGCCGTAAACCTGTT
GTTTGTTGGATGCTGACGATAATTGCTCATCATAAAGTAAAGCTGATTCCCGGTAAGTGA
CCAACCCATAGTTCTCCATAGCTCCAGCAGCAAAATCAGGGATAGCAATCATATCCAACT
TAGGTAGCGGGTAAGGAGTGGCGAAATAACTGGTTATTAAACACCGTTAGAGATTCTGAT
CCAACTAGCACCATTTGTTGGCATGTCAAATTACTCAACATATCTGTTTTCTCGTTTAAT
GCTGCCTCACTTTTTATAAATATCTTAGAAGAAACAATAGGTTGGAAGCTTACTCTTTGT
ATAAATCCAGTGATTTGACCCCAACATCTAATGCAAACTTTCCTTGACTAGTCTTGCCAA
CTTGGGTATACACACGAACCTTGGTGCCTAGATAATATTATCAGGTCGATAGAAAATGTA
AAAGCAGGGAAAGAAGGGCAGTAACGTAGCACTTTGAATGAAAGACACTAAAAGTAATGG
TTTCAGGAAAACCGAGCTTCTACCTTCTAATGTTGAGCTCTCTATGTACTCAAATAAACC
AACAACTATAGCGACCAGATATGTTGACATAAGTGGAGATTCCTCATAATATACAGTCTT
CAGAGACCCACAGACTGTCTCCTTAACTACTGGCATGTTGGACAATGCTACCAGTTCAGC
TGGAACCTCCAATGTTATCTTGAACTTGGCCTGAAGAACAGAAATACATATACAAGAGAA
GTTACTTTAGGTGATGGATCTTAGACCTAGAAAGTTCTTAAGAAAAATAAAAGAAAACAT
GCACGTATATTTTACGCCTATATCAAAATTCAAACTGAATTTGACTGTAATGTTTATATT
CAGATTTTAAGTACATTGAGATACTGTTGGTAAAATAACAACAAAGCATGTTAAACACCT
TAAATGCAGGCTCATCCCAGCATGGAAAGCACCGCCGTGCATCAGCAGCTTCAAACTGTG
TAACCGCCATGTTTCTTGCCTCCCCGTTGTACTCATACTTGCTGCAGTCAAATACCAGCA
CAAGAGCATGAGAAACACAGACAAAATATAAAGGAATAAGAGCAGGTGCATTCGACAGGA
ACTGATTATGCCCAAATACTCCACGTAACACGATTTTGTTCAAAAGGTCTAACAGAAATC
TATGCATAATGGTGCTGGAACTAGGTACAGTGTTTGCAGCATACATTCCATCTCGGTTGC
ATGGTAAACAAAGATTCAAGGCATGAGACAGAAAGCTAATATTTCCTAAAATTCTAAACA
GAAAAGGCAAATTAATAATAACATCCTACATCTGCTCTTCAAATCTGCCCATTCAGTCCC
TTTATTCACAACATAATAAACTTCCAGATATTTGTTTTTCCAGTTTCCTATTTATTTTAA
GTTATGGACACCAATACTAACAGAGTAACATTTTCCAATGATTGGTCTCCTGTTGATAAA
TACGACGTTCAGAATAGCAAAACTGAATATTGGATCATGGGGCATGAGAGGATCTCAAGA
TCATGATCCAAAATTCCAAATATCCCACGATCTTGCTTAATATCAAAGAAATGACTGTAT
CAGATAACGCCACTCATCACTTCAGCACTCTAGGTATGGAACTGACAAATCATGGTCCAG
TGACATAGGTTGCTTCCAAGCACACAGCTCATCACTTCAGCACTCTAAGCATGGAAATGA
CTGTATCGCCGGTAATTGTTCAACACCTCATGTGCACGAGAGACTAGCCATGGGAGCGTC
CGTGTAAGATGGATCGGATCTTGCCCATACCATCATCATCTCAGAAGGATAAAGGACGAC
GATGTACCTCCTGTAGAAGCCCCTCATCTGGTCGTTGAGGGTGCCGGTGAAGTCCATGGC
GAGCACGCCCTCGCCGAGGGGCAGCTCCCGGCCGAACCCGAGGACGAGGATCTCATCCTC
CTCGAACTGCACCACCTCCGTCGGCGCCCAGTCCTGCAACGCAACACCAACACGGCCCTG
CCATGAGAACCTGACAGACAAACAAACAAGAGATAGACCGGAGGGCCTGCCTCGAGGTGG
GTAAGAGGGCGGGGCGGGTGCCTGGAAGCGGATGGAGGACCGGTCGACGGCGAGCTCGGC
GGCGTTGAGGACGAGGAAGCGGGTGGGCGCGGACACGGCGACGGCGGCCGACGCGGAGCC
GGAGAAGGTGCAGGCCGCGAGGTCGGGGCGGAGGACGAGGTCGTAGCGTAGGGGCTCGGC
GAATCGGGGGAGGCGGGACTGGCCCCTGAACTGCTCCGGCGACTCCGCCATTGTCGGCGG
GCAGATCTGGAGCGGAGGGGTTGAAGGCCGCGGTAGATTTTTCTGAACACAGTAGCTTCT
TCTGACTGCTCTGTTTTGGGCGTAGATATTGGTGAAGGGCGTGGAACTGAAGTGGACTAC
AGACTGCAGAGGACACGTCTACTCATCCAACAAACGTTCGCTGGCCAGTAGTCACGAGCG
CACATACGAGCATCTCCAACCGCGGCGCCATATAAGCGTCGTCCTGAAAAAATAGCGGTT
TTAGCGTGTGCACAGTCACTTTAGACGCTCCATCGGAGATGGAAAAATCACGCGCGCGGT
ATAAGTGGTTCAGCGTGCGGGATGAAACGGCATCGCGCGCCGCTTATTTCGTGCGCCCGC
TACCGCGCGCTGCACGCTCGAGCGCCCGCGCCGCACCTTCTCCTACACCCCCCTTTTGCT
CCACCCACGCCCCGCCCCGCCTCACAGCCGGTGGATTCGCCTGATGGACGACTGCACCTA
CATCACCCTCACCCCTCCGTACGCCCGCGATCCCGCCGTCGTCGTCGGCGCAAACCCTAG
CGCGGGGACCTCTAGCTTCGCCTCCGTCGGTGCTTCTCCAACCACGGGTCTCGTGTGCGG
CCTTTTCATGGCGCCAGGTCGTGAGCGGGTGGCGACACCCGCCGTGAAGCCACGTGCCCC
CTTCTCGAAGCTCCTAAATGTGGCGGTGGCGAAGAAGGACAAGGTCTCCGGGAAGAAGAA
CAAGGCGGCGAATGGCTCCTCTAGACGGCCGGAGAAGAAACTTGCAGGCCGTGCGAAGGA
TGCGGCGGCGACCGAAGCACGGGAGGGATCGCTTGCTGCGTCGACGGGCTATGCGCACAA
TGTGTTCGATGAAATGCCCCCAAGGTAAAATTTTGCGCAATTTTTTTCGATGTTGTTTTT
TGAATGGATAATATGGATAGCTTATTTGTTTTGGTGTACATACTTTGAGTTTCAGTGATG
ATATATATATATGTCAACTATGGGTGTTGGCNNNNNNAATTCTCATTGGTCTCAAACCAA
TGAGGTGCATTTTGATGATCATGAGTTTGAGGCGGACAAGGATGGTGAGGGTATCGTCGA
TGCACCGAAAGAAAGAGCGGGCAACTACACCATGGGCAAAGACGTCTTGTTATGCAATAC
ATGGTTGCAAGTGTCTAGGGATGTCATCGTTGGGGGACGAGAGTAGAGATGCATATTGGA
TCCGGATGAAGGAGCATTTTGATTTGCACAACAAAAGTGGAATTTACCACACGGAAAGAT
CTCTCTGTTCTCGGTGGTCGACAATCAACAGAGATTGTCAAAAGTGGGCGGTCGCACTTA
AGGCGGTTGACACGTTAAACCCAAGTGGCACTAATGATAGATATAGGGTAAGCGGCATTT
CTTTCATGATTTTTCCATGTTCATGCTTTTTCTTTGGTGTTTCAAGTGCTAGCTTGTTCT
TTTGTTTGTAGCTCACTATTGCACAAAAACTTATTTCAAGGAGAGGAGAAGAAGACCAAG
AAAGGAAGGATGAAGAAAGGGAGG