morexGenes - Barley RNA-seq Database

Contig contig_159565
Source Contig contig_159565
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_159565 (8889 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_159565

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21503	1	4296 bp	MLOC_21503.1	Available	Available	LOC_Os12g01240.1, FRAME:-3, EVALUE:0.0, 13112.m00033 protein mitochondrial substrate carrier family protein, putative, expressed
MLOC_21502	1	2422 bp	MLOC_21502.1	Available	Available	LOC_Os11g01240.1, FRAME:+2, EVALUE:1e-99, 13111.m00032 protein IBR domain containing protein
MLOC_21504	1	315 bp	MLOC_21504.1	Available	Available	None
CDS Structure of MLOC_21503

CDS Structure of MLOC_21502

CDS Structure of MLOC_21504

Contig Sequence (8889 bp)

>contig_159565 8889 assembly3_WGSMorex_rbca.fasta
ACCCCCACCTTTGTCACGTTTTTTCCTCCGCGCTGCTTCCTGCTTCAAATCAATATATGC
CAGCCTCAGGCTGGATCTTTCAAAAAAAAAAAATTGTAGTATATATTTTGGTAATTTTGT
TTTCTCATGTTTACGAACTAACGGATTGCAGACTAGAGATTTTGGAGGTTACATATGTTA
CAGAAGAAAAGCTAGAGTTACCGTAATCCATAAACTGATGCCTCTATGCCTCTATCATCT
CATAACTGGATAATCCCATCTTTAGCTAATTGGTTTGAATAGGGGCTATCACCCATTTCC
ATTTTACCGTACATCAGATATGTAGTGTTTTTACAACAGGGATATACAGTTAACAAATCT
CTTCACTGAAATGAGATCAGCGTCTTAAGCTAAATGTAGCTTAAACATGAACTTACAGCT
CTGTGCTGTTTGGATATTCGTTATATTTGCTGTACAGGTTTTGTGTTTCTCTATCTGCTC
TGCTTTCTGATTATGCTGTTAGAAAAGCAGAAGAGAATTTTCTGCACTACTTATTCATTT
AATGTTATCGGTTTCAGCTGAAAATATTTTTCTGGTCCTGGGTTCATGTTCGATACAGAA
AATGTTCTTGAACTCTTTAATCCAAAGGTTCCCAAGGTGAATGTAGTTGGGCTCAGAGCA
GCTTTTAGTTAGTTTTAGACATTATATTTAGACATGAATTGTGCTATGTGCTTGACCAAT
TTAGTAAGCTGTCAATATGGCTAGTATGACAGCAGTATTCATTACTCACAAAAGGTGTAG
GTCAAGATTAAGACTAAGATGAGTCATTTATAGCAAGGGAACTTTATTTCTTTTCCTATT
TGTCTGGCAGAATGGTAACCTTGAAAGCTGAATAGCAACTACGCATCCAGTTCGGTGCTG
GTCTTGCTTTTGAGTTTAGTAGAAGTACTTCCCCTTGCCGAAGCGAAAATTGAGTAAAGA
GCAAAATTTCATGTTTTGCTTACATGCATAGATAATTGGTGTGCATGCAAGTTTGGTGGT
CACATGATTGAATTATTTACCAATTCTCCTATTGTTATGTTCTTTACTCTTATGCTTATT
TCCTAATTTTTGGGATTGTAGATTGTTGGAATTTGGCGTCCGAAACAGATGAAGCTTGCA
GAAATGATAAATCAGGTTCTGTCAGTAGCAAAGAAATTCAAGAAATGTGAAACTAAACTT
GTGGAACGAGGCAAACTTGATTACGTGATGAAATTAGCAAGAGATTCAATACTCTCTCAG
ATTACCAAAGCTATTGCTGTTAATGCTAGCAAGGAGAAAAGAGAGACCTGCGCCATCTGC
CTGGAAGACACCGATGTATCTAAAATTCATGTTGTTGAAGGCTGCGCACACCGCTTTTGT
TTCTGCTGCATGAAGGAGCATGTGAAAGTTAAGCTACTCCATGGAACTCTCCCAGCTTGT
CCACAAGATGGTTGCACTACAAAGCTAACCGTGGAGGGTTCAAAGATATTCCTATCGCCT
CGACTGTTAGATATCATGGTGCAACGCATCAGGGAAGGACAGATCCCTCCTGGACAAAAG
ATTTATTGCCCGTATCCCAAGTGTTCGGCCTTGATGTCCTTGAGTGAAATGCAGCACCCG
TTGCAAGAATCTTCCTCAAAGCACACCATTGCTGATGCTGTCACCTTGAGGAAGTGTGTC
ATATGCAGAGGTTCATTCTGCATCAGCTGTAAGGTCCCATGGCATGATAGGATGACTTGT
TACAACTACAAGAGAAGATACCCACAAGCCCGTCCAGATGATGCAAAGTTACAGAACCTT
GCACGGCAGCAGCTGTGGCGCCAATGTGTCAAATGCAAGCACATGATTGAACTCTCGGAG
GGCTGCTACCATATGACTTGTGTGTAAGTATCTAGTTCTGGTTTTGCCGTTTCCATATCT
ATCTTTACCGATGTTACTATGAGTGGTCTATTATTATGATTTTTCATGCCAATCGATTCC
CTGCTGATGTATTTTTCATGTCCTAATGCTCACAGCCTCAGATTTGTTTCCTGTTTGACC
TTTTCGTGCATCTTGTTGTTGCTCAACTCTTCCAGATGCGGCTATCAATTCTGCTACACC
TGTGGGAAAGAATGGAAGGACAAGAAAGCGACCTGCTCCTGCCCGCTGTGGGATGAAGAT
AATATTATCCGTGATGGCATGGAGGAGGAGGAGGAGGAGGAGAACGATGACTACGATGAC
TCTGATGACTCTGATGAGGACGATTACTATGCTAGAGACTATGACCGGCATTACTATGTG
AGAGACTATGCTTGAGACTACCCCAACAACAATCGCGGGCATAATCCTCGTCATGGCGTT
GGAGGGGCTCAAAATTTCTACAACTACGACTAGTCCATTTGCAGCTACAACTGATATCTC
AGTACTTCCAAGTACTGGTAGGCAGCTACAACTGGTATCACTGTTAGTTAAGCAGAATCT
CCTACCGTTCTATCCGCGTTTAGTATCTAACCATCCGATGGTACTATGCCGTCAGGCCCA
CATGAACTTAGGCAAGGCAAATTAGTACGAGTGAACATTGGCTTCTGCTCATGGCCTATA
TTCTTATCTGATATTTGATGTCTTCTCTTTTATGATGCTCTCTCGGATAAGCTGGCTCTG
TTATTTTTTGTAGTTTTTCTTCTCTTCACTTCATCTTAATCCTCAAGTAAGCAATAAATC
ACAGCTAATTAATCATGACAAGGAAAAGAAAAAGAAAAAAGGATGGGGAACACAAGAATA
GCACATGGCAGAAATGATCTGGATTGCGTAACAGTTGAAACATGAAAGTAAGTTCTGCAG
GTAGAAAGAGCAGCATGCCAACTCCTGTAGTTCCTGCCGTCTAGTGTGCTATACATACAG
AGTGTTGTAAAGGCCTATGGAAATGGAAAATCAAAAAAGTTTTCCGCGAGAGGGGAAAGG
ATAACCTAACATCATTTGGTAAGAAGGCCGTGTGGAATATCTGTCCTGTCCTTTGCAACA
AGGGCACAAAAACTTCTGTTGCATGTCTCCAGTTCTCTCTTTACATCATAGAGGAGGTTT
GACTGGTTGAGTGTGCCTGTCATCCTCTAGAACCCGCCATGTTCTTCTTCTCTTGTGAAG
GGTCGGCGGCCTCATTCTCAGCTTCGATCATGGCCTTCTTGGCGAGCTCGTAGCCTGCAA
AGTTCATTGCTCCCAGAGGAGCGATCCAGAAGAAGCGTGGGATCGCACCCTTGAAGAGCC
CTAGGGGGCCCTCGTTTCGGAGGATGGAGAAGACTATCAACTGCATGGAGACTGGCGTGC
CTGGAGGGGCAGTCATCATCCGGGTCTTCATCACGTCGAAGGGAGTGGTGACGACTGCTG
CAAGCCCTCCAGACAATGCTCCGACTGCTATAGTTTCCCATGGTTCCAACTCTCTGCTCA
AGACATGCTGTGCTGCCTACAAAACCATGTGCATGATGATTGGTTAGATACATTTAACTT
GGGAAAAATAATGACACATTCCAAATGTAACAGACATGACCAAATTTCAGACTACTAACA
GCAAAAGTTACTGAGGTTGATGTAAATTACATTTTGACTTTGGACAACGAACATATATGA
CTAAATTTGAAGGTATGGTTAAAAATAACAATGAATGTTAGAATTCAGTTTACCTTTTTA
GCTTCACCGTAAAGGCACATTCCTGCAACATAGAAAGGAACCTCACGACAAAGAGTGGCC
CCAGTTCCACGGAAGAAGCCCTTTAGGCCATCTTTTTGCATGGTACCAACAATGGCCTCC
CCTACATTGTCGAAGATTCCAGCCTGCAACCGTTGCTTAAGAACCTCACAAGGAATACGG
ACCGCGGTTCCAAGGATTGTGCTGCAGAAGGAAGCCAACGATTGCACCTACGAGAGGACC
AGATATAAGGCAAAACAGTTATTCACGTACTCTTTCTTTTTGCCAATATCCTAGTTCAGG
TGTAAGCCAAGCAGAATAATTTCCTGTTAACTACATCAGAGTGTTATCAAAGAAAAAAAA
ATGTGGTTCTGTACTTGATTACTTGAGGCAAGTCAGATTCCTAATAGCACGGGAGGTAAG
ATGCAATCCAAGAATTAATGCTACAGCTACAAAATTTCTGAACTTTCGGTTGTTATGCTG
ACAAGACGGGTGCAGATTCAATGCCAATGAGACAGTGAGTCGATTATACAGCATTTCAAC
ACTTTGTATTGTAGATAATAGAAAAGGTAAATATGCACCATGAACAGTAAAGAGCGTACC
TGAATCTCTGGAAGTGTTGGAGCCACTCTTACTAATATGAGCTTACTTGCTTCAAAGATT
CCTGTTCTCAAACCATGGCTGCAAATGATATGAAATATAAATATGCAGCCTCCACAAGAA
AGCTTGCAAAATTTTAGAGAAGAACTCACCTTGAAAACTGTCCGAGAATTGCAGGGATAG
AACCTCGATACAGTCCTTGAATCCCAATTTGTGGAAGCTTTGAAATTAGCTCTGGAAATG
AGAGCGTAGATGCTTGGACACGTGTCTGATAATATGAAAAGACAACTTGCATGAGAAACC
TCCATGGGACTGCAAATTCTCTCACCGAGATCATTAAACTTCAGCCAGCCTAGGCTAACA
CGGGATATGGCGAGTAAGCTTACAGGCTTACAGCAGATAATGAGTTGTCATACTATGCAG
TGATAGCTCGTGATAGACCTAACTTTGCTAGATGTGCTGCCTTAACTTTTTAGTTGCATA
TGGTCAAGAGTCCTAGGATTTGACTTTAAGGCTGTATGGTTAATGAGTTGTCATACTAGT
TGCATATGGCGAGTAAGCTTATGACAGACATTATCTGATGTTAATTTATTTGGCTTCAGT
CGCTCTGGTCATAGATATATCCATCTCTAAATATGTCTAGTGAAAACATTGCTGAATGAA
TGCTTTGGAGACCAAACTTGTTTTAACTGAAAGCTAAATGGAAGCATGTTGCCGTACCTT
CATTGTATCAATAGGATGCAACATAGAGGTAGAAAGGGCACTAGCAAGACCTCCAGCTAA
AGCCGACTTCAATACATTTCCGGTGGATATTTCTACAGGTGGGGGAACAGCAACCAATGT
AGCTGCTTCAAACCAAACGTTCCTGAATGCATTTGTCAGTGAAGAAACAAGTCAATGGCA
ATCTGAGCACGAACGCTGCTAAAAGATAGTCGAGAAAGTGCGACTATTCCCATGCCTAGT
TGGTTGTTCACTCAAGTCAACTCAGAAGTAATATTGTGCTAGACATACCGAGGATCATCT
TCAAGGCGCTCTGAAGGAAGTAGAAGCATGAAACTGCGAAAATGGCTGTACGAGATTGAT
CCTTCCGAATCTGCATTTAGATAGCGCAGCATGGCAGCAGCATTATCTTCATTGGCCGGG
AGGCCTGCACCTTTTAACGATTCAACAATTTGATTCTTGTGAAGCGTCCCAGACTTGCTC
AAACACAATGTGGTGTATGCCCGGAGTATTGTTGCCTCCTTCTGCTCCATCAAGGATAGA
AATTGTTTCCACCCAATCGACTTTGAAAACATGTTACTTCTGGTACGCCGTAACAAATCC
CGAGCATACCTCCGCGGCAATCGCCTCTTTCTCATTGCAACTTCAAGATCTTCTAGGGTG
ACTTGGCCATCACCATCTCTATCCAATTCCTCAAAGAAACGCTTCCCTGCAGCAACAATA
GGTACACAATATAACTTAGGTGTAACATGCCAATATCTACCCTGAATAGAATAACAAATG
AACGTTTTCACTAGTAAGATTTCAGCAGCATTATTTTTTTCTAGAAGATTTCAGCAATAT
GTGACAGCATCAAACCAATCCCTGGAGCTCTAGATGTATTGACATAGATGGTACAATACC
CTCTCAACCATTAGATTACCCTGTGGAACTCTTGCTCTAAAGGATTGTAGTGCATAGTCC
AAGTAGCGTTTATCAAAATTGTAAAACAAAATGATGGAACTATCACCTTAGCTGGTGTTC
AATGAGGGGGCAAGTAAAGCTCACTACACGATTAGCACAGATCCTCAATCTGCATACTGG
AAGGTCATCTATGCTAATAAGGCAACTATGCAGTTACCCTACAGTTGTCCCATCTGGCAC
CATGTAGATAACATATTTCTTTATTTGACAAGAAACATGATAAGTTTCTGACAATTGCAA
AATCATCAGCCTATACACCAAATAAGCAAAGTATAATGCGAGGAATTCCTCCCACTGGAA
AACAGTGTTACTATACCTTCGATTTCTGCATACCGGAAGAAGTCTTGCACGGAGAAAAGC
TTCTTCTTGTCTGGATGGCTATCCACTGAAGTCGACAATCTGCCAACCAGCTGTGGAACC
AACTCAATCAGCTCCGTCAGTGAAACCGTGGACAGAGTTGACCGCAGCCGCTCCACATTC
GACAATGGGATGTTGAGCAACCGGCCGGCAAACTTGTGTGGCGGCTGTGCAGCATCACCG
CCACTGTCAACCCCTTCCCTCTCCCCGATTACACCATCCTGGCCAGCAGCCGGTGGCGCC
GAGGCCCGGGAGTCATCAGCGAAGCTCGCCAGCGGTGCTCCCACCCTGGCGAACCCCAGG
TTGGAGAGGAACCCGTCGAAATCAGCCTTCTTACCAACGATGACCTTCCTGACGACCTGA
AACTGGTCGATTTGCAGGGCGGCACTGCCGAACTCCTCGCCCTTCTGCTTGCACGCGCCC
TCCAGCACCTGCAGGTTGTGCGCCAGGGCGTCGAACGCAATGCAGAGCAGGAGCTCCAGC
TGCTGCTGCGGCTGCGGCTGCCTTTTCCCGGCGTCGGGGAGCGGCGGCGGGGCCGGTTTG
CTCCGGACTCTCTTGGGCCTGTGTTCGTTCCCAAAGCATCTGGAGAATGACCTGAGGGGC
TTGTGGAGGAAGTTGGTGAGGACGACGTGGAGGTGGAGGAGGCAGTCGGGCTGGCGCTGC
TGCTCCTGCTGCTTGGAATCGGATCCAGGGAGGTGGAGGTGGGCGAGGGCGCCGCGGGCG
GCGGCGAGGAAGGAGTCGAGGGGGTGCTGGTCGGACGCCATCGTGACGAGGCGGGCGGCA
GCACTAGGTGGCGCGGTGGATCCCAGCGAGCGGCGGGAAAGGCCGCATGTTGGTCAACCG
GAGGCGGGCATCTCTCGCCCGCGGAGGTGGAGGAATGGCGGTCCCCTTCCCTTCCGGCGA
GCGGCGGCGGAGGAGATGAACGGCCCGAGCTTGTTTGTTTCGATGAGGAGGGGAGGGGAG
GGGTGGCCGGGAGGAGGGGGAGACGGGAGGTGGAGAAGCGGCGAGCCGCGAGCAGGAACC
CAAAACGACAGAGAGAGAGAGAAAAAAAAACTTTTTTAAGAGAGAAAAAAGATCCAGTTT
TTCCTGGGGAAATGAAATGTGACGGCCTATTTTCCTCTCCATTTTCGGCCTGTTTTTGCT
GCACAGCTTTATTCGTGTGATGCTGGTGCTCGTGTCGCCACTGGCCACTCTGAATTGTGC
GTGATGCCATTGCCACAGGTGCTGAACATTCACCGCACATCTCATGTTTTTGGACATGGT
ACAATATAATTACCGCGCGTCACCCATGCACAGAAGCAGTGATCTGGTTCGATCTTCAGG
AGGACTTTGCAGCAATATGCATATGGCGTTTGCGCCATGCGGCCAATGAATGGAGACGAA
AGGAAAGGAAAGGATAACCAAGATCCAACTGCTCTTCCTGTTCAGTGGGCCCGCTCCTTG
GTTCTATCAGCAAAATGGATAAGACCGACGATAAGAAAAAGGAAATCAATAGCAACAATG
AACAGCAGCAGCGGCAGCGTCTCACGCGTCACCTCCGAGATTTGCCACCTCAACCAACCA
GCCGAGGCAACCCAGATCTCCCAAACCAAGCCGTGCCATCATTAAGAAGTAAATTTACGG
ACAGTACTATGCGTCGACGCGCAGCGTGACCGTCAGATCTGTAAGTGGATCGTTAGATCT
ATGCATGCAACTTCTTTTTTCCGATGCAGTAAATTTCGGCGCGATACATCAATTTTCGCC
AATGGTTGCAATAACAAAAAATTGTAGCAAAAAAATATCTACGTGATCGTAGCAAAAAAC
GAAGCTGATGATGCGTCGTAGGCAAGAGTCAAACGCCGGTTGTAACAAATATCTACGTGA
ACATGTATGCAACTTTTATAGTGAACGGTTGCAGCAAAAAAGATGTCGGTTGTAGCAAAA
GTCAAACGCCCGGTTGTAATAAAAATCCAACGAATTCGAGTTGCAACCAACCGTGGATGC
AACTTTTTAAATGGATAAAATGTAGCAAAATGACAAACGTGAAGCAAAAATAAACCTGGT
TACAGCAAAAATCGGATAAAAAAATGTTGCATGCCTCCCAACGAGGCGCGCGGCCCGCGC
GTGACCGGCCAAACGATTCGGCCGGCGCGTCGGGTGAAAGCATTTACCTGAATTTACTCA
TCCGTGGCGGATTGTAGTAAAATTCTTTTCCGCTCACAAGATGCCCTCGGGCCCCATTAC
GTCTACATCGTCGCGGCTCAGCCCGAAACTACTGCCTTTGCATGCCACCACGACCCGCCA
CTCGCTAGCGACCTCGTCAGGGACCATGCCGGTGTACGCCTATGCTTCACCGTTTGGAAG
CGCCCAATCAGACCAGGTGTTTGAGGTGGTGGTGCGACGTCTCGTGTGCACAACCTTGCG
TGCACACACACACACAATACTCAGAGATATGCGGCGGCTAGCTTTAGGGGGTGTTTGTTT
CCAGGGACTTTTTGGTGTAGGAACTAAAAAAAGTCCCTTGTAGTCCCATGTGAAACAAAC
ATGAGGGACTTTTAGGGACTAAAAGGGATATTTGGGACTAAAGGAAGAAGTCCCTATGGA
AGGGTCTTT