Contig Data
morexGenes
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Map Locations of contig_159550 (3822 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159550

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21486 5 3818 bp MLOC_21486.2 Available Available LOC_Os03g55090.1, FRAME:-3, EVALUE:5e-12, 13103.m05985 protein alpha-glucan phosphorylast isozyme, putative, expressed





CDS Structure of MLOC_21486






Contig Sequence (3822 bp)

>contig_159550 3822 assembly3_WGSMorex_rbca.fasta
AGTACAAAAGCTCAAGAAAGATGCATTTTCAGTGATGTAATACCATTGGGATAATGGCTT
TGATCATGACCACCGGCAGCAGAGAGGAGGGAGAGGGGCCTAACCATGCACGATTTGCTT
ATCGAGGCAATTTCCAGTGAGGGGGTGGAATAGTGGAACATGGCAGCTTTGATTAGAAAA
CAGTTGATATGATCATAGCCGCCGTCGGCCACCACGGCGCAATCCTCCAGATCCGCAAAC
GTTCCATGGCCACCCTCCAGTCATCTTCGTCTTGCAGCATCCTTCGCGCCGCCGCCGGGT
GATCCGGGGGACTCAAACCACGTTGGCGCGCCCACGGCCTGCACGGAGGGAGAAAAGGCT
CCATTGGTTCAATAAAGAAAACCAGATCCAAAACAGCCGAGTACATATCCTGCACTCCAG
ATCCAAAACTGCCGAGTACATATCCTGCTCCCATCGTACATATCCTCCCACCCATGCCCA
AATACAAAAAAACAACCACAGTCAAACCCACGTAGCCATCGCACGTCGCCCAGCCCGAGC
GCACGTCAAGGCTGCTGTTCTTCCGCTGCTCGCCGGCTGGGAGCCCGAGCGCACGTCAAG
GCTGATGTTCTTCCGCTGCTCGCCGGCTGGGAGCCCGAGCGCACGTCAAGGCTGCTGTTC
TTCCGCTGCTCGCCAGTTCTTGCTCCGCCCAGCCTGAGCGCACGTCGACGGACTCCTCCT
CTTCCACCTCCGGCTCCTCCGGCTCCTCTTCCTCCTCCACGGCCGCGTCGGATCTCAGGT
CCAGGCTCTTCTGCACCGACCGGTACATGCTCGACGCTAAGTCCTTGGGTCAGGCAGGTT
GAGCCCCCTCTCCATCAGCGCCGTCTGGTAGACCAACCTCTTCGTCTGCTTCGGGCCCTC
GCTATATATGATTCTTTTCTGTTTTTAAAATAATGGCTCTGCGATAATTTTGATATGGAC
TAAAAACTATATCTCTGACAAAAATCACTTACCTGGCTACCAACATCTTGTAGGTTCTGT
CCACGTTGTTTTAACGCTTCAGCATATTGCCTTGTTAGCTCTAGATTGCCAATAGCATTT
TTGAGAGCTCTTCCCTGCAGTACACAAAAAATAACCATATAACATCATATCGCAGTTACC
AAAAGTATGAGATAAGGCTAAAGGAAGTATATTGCAAGACCTGCAAAAACTCCATGGACA
GGTAATAAGCTTGCTTTGCATTCACTTTGTTGTAATAGTCATATGTTGCATTCCAATTCA
TTATCAGAGAATCAAAAACACTTCTAGCAGTTGCATGGTAAGCCTTTAGGGGTGAAGCGT
GCTCTGGCGAGAACAACGGTGTGAAGTCTGCATGGTGCTGGATATTTGACGCGATGGCGG
AAGAATCAATGGAAGTTAGCACGGCTGAAAGCAATTAGGAACAGATAAAAAAGAAAAGAC
TTCCCAACCAATGTTTTCTTACAATGTCAGGATAAAGAAATAGTAGGAGAAACAGAGCGC
TAGCATGGATTCAATGACATCATACACTACACAAATCAGCAAGCACACATTATCCATAGA
TAAATGTGAGCATTTACATTGGTAAATTGTGAACATATGTGGAAGCTATCAATTACAGGT
CAAGATGCAAATCCGTCTCAAATGATTCCAGGATGCATACAAAAATCTTAGATCAGAGCT
CAAACAAAAGGCATATAATGTCAAAACCTAGGGTTAAGACTTCAGAGTATTACCTGTCCG
AGAGAAGCTCCAGAGATGGGGGCACCAACAACGAAGGGGAAGCTGGGAGAAGCACTGGCA
ACACCAAGACCAGCCTGCTCATAGATCAAGAGAAGTTGTCACAAAATTTGTAACTACTTG
AAACAAGTTTAAAAGTATATACATGTTGGTTCAACAGGTATCCTGGACCTACAGAGCACT
AAGCATGTCAAAAAGGGGATCCCAGTTGCGCAAGATTAAGAACCGTGCGGTGTAGATTTA
TTTGTTTCTAGAAGCAACCCAGATAATAATTGCATCAGGGGCTCAATGCAAGTGGTTCAG
ACAAGTTAAGGCAAAACACTACAAGAAACAGCAGTGCTAGCGCTCTCCCATACATGACTT
GGGCAATATCTAGAAAGGAGAGCCTATGAAATAGTGGCACTACATTATATATGAAATTGT
GCAGACTGGATGCCAAAGAGCACAACAAGAAGCTACAAACAGATAAACATTTTCTTCGGA
TGACAATCTATACATTAAGTCTCAACACTATATTTATAAATTAATGTCTACCAAACAAGC
TCAGAGAATGCAAAGATCAAATATCAAAACTCAAATCCAGAGGAATCAACAACTCAAGAA
GAAGATAAACAGGAACGCACCTCCGCCTCCGCCCTTATTGGTCGTTCCGCCTCCACCCTT
GTTGGTCGACATGGCTAAGTTCCCAAATCACCGTTGCAGCATGAGTAGATGGAACAAGAA
TCACGATCAAATAAGCTCGGAAAACATCGTGAGGAGCAAGCAGGGAGGGATTCGGCTTGC
TTGCTCTACTGATACGGATACATGTATCAGTATCGGGACGATACAAATGCGTAAACTCAG
CATTTTGGAAAAGCACCACTACAGGATATGTTGTACTATTTTCTAATTCAAAAAAATATA
TATGTATAGATAGAAGCTAGGAACAACATATTACTTTCTTGTTTGCTCTACCATGCATGC
CGAAGCAGTTGACTATTAAGATCAAGAACACGGCGTAACATTACCACTATATTCCCAGAG
AAATAAACAATATTTGCGACCATTCTTTATCTTAGGGCTCATGCAATATGAATTTCCGCT
GATTCTAACAAAAGCTAATGTTGTAGTGTTTCAGGTTTCGCTCTATCTTTTCAATGCAAA
GGCGAGGGGCTCAAACTATTATGACCATGTCAAAAACATTCTTCTAGACCTGTTGAGGAC
AACTGAAGAAATAGCAACATCCATGTGGAAAGATAATTCAATAAAGCAAGAAATCCTATA
GTTCAGGCCCATATGAAGTTCACAGATTTTTTTAGGAAACGATCAGAGTTTTAGCCCCTC
CCATTTGAGCTTACTGTGAAGCCTTGGTTGTTGGGAGTCAACTGGATGCATCACTCCTTC
AAATACGTATTAAAATTGTTCCCCACAGTAATTCCTTCTATACTGCTGCATAAAATTTGT
TACAGTAATAATGAAGTGGACATCTGTGGAAGTGTGTGCTGCCAAGATAAATAATAACAT
AGCTCATAGTGTGTAGAAAAAACTATATAGCAGAAAACAAAACATACATTCCATATTACT
GAATGAGGTCGAAACTATAAGCCCAATAGTTTCCCGCTGATTCTAACAAAAGCTAATGCT
GTAGTGTTTGAGGTTTCTCTCTATCTTTTCAATGCAAAGGCGAGGGGCTCAAACTATTCT
GAACATGTCAAAAGCATTCTTCTTGACCTGTTGAGGACAACTGAAGAAATAGCAACATCC
ATGTGGAAAGATAATTCAATAAAGCAAGAAATCCTATAGTTCAGGCCCATATGAAGTTCA
CAGAATTTTTTAGGAAACGATCAAACTTATTATCATTTAGAGAACAATAATTGGAATTTC
AGCGAAGTATTCAAATGTCCCCTACATAGTGTTTGTTTCACTCCAGTTTAGAGCATAGAA
CCCTTCCTTATGATTGTTTTTTTCTCAGAATCGCTACAGCAGAAGGCACGGTAATTAATT
GATTGTATAATTTCATGAAGAATAGATTACTCTAAGTGCATAAGTAATTATTACTATTTT
GCTTGCACATAAACAATTAAGTCTGGGACTCATTTTGAAGCT