| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_159523
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_21451 |
2 |
1966 bp |
MLOC_21451.2 |
Available |
Available |
LOC_Os01g08270.1, FRAME:+1, EVALUE:0.0, 13101.m00860 protein aminotransferase, classes I and II, domain containing protein, expressed |
CDS Structure of MLOC_21451
Contig Sequence (8454 bp)
>contig_159523 8454 assembly3_WGSMorex_rbca.fasta
GTAGGAAGAAATCGAAGGGGATTAGAAAGGATTGAAGGAGTTTGCTCACCACAAACCCTG
TCCACCAAATAAACATGCGGGGAATTGCGGGGTTTCTGATCCCCTCGGAGATAATCCCCT
ACAAACCTCTTCAAACCCTGTGCGATCAAACAAGGCCTAAAAGCCACTCCAACAGACCGA
AGTAGATTTTGTTATTTTGGATCGTACGTCCGCTCATACGTGTCCGCCTTTTTTCTAAGG
GAAACGTTTCCGTTTTAAAAAAATGAATGGTTGATGCGTTTAACGGAATAGACACATTTT
TTGATATATGTTCGTCTCATCATTTGATCAAACACGTAGCAAGCAAGCAGGGAGCTTGAC
GCCGGTGCACAAGTGTCGTCTTCGCGCAATGGGCGCTCCTGCTACTCCTGCCCCGCAACT
CCGCCTTGCTGCTCACCCAACTCCCGCCTTATTGCTCCTGCCGCACCCCTGTAGCGCTCG
TCCTGCTGCTCGCCACATCCTTTAGGTCCCGCCCCACCACGTCCAGCTACCCGGAGCTCG
AGGACGTATCGAGTGCACCGACCTAATTCAGGCACCCAATGCATCGATGCTAGATGAGCC
ATTGGATAGAAAATAGAGGGAGATGATATGGCTAGAGAGATGGATAGCTGGTATATTTAC
AAAGTGGACCTTTTATTGTTTAGAAATCAACCCGCACCCCATTTCTCACATTCTTAGCCT
TCCATCGGTAAAGTTGTTTGTTTATTTATTTTTTGTCCAAATAAAACCGGGTAATATATT
CTTTGAATGGGATGTCGAATTTCAGAACTGTTTTTACTAACATCATTGTTTCGATGAGAT
CTGTGACCAAACATCAAGTTCTGAGTACAGTTTTAAAAGCAAAAAAGATAAATCAAAATA
TGTCCACTGTTGATATTCTCTCAAAGGTCTCGCCAAGATAAATACAACAACCAAAACCGA
TCCAAAATTAGAAATTTGATTTAAAATATATCATCCTTTTTGTGTTTGAGCCAAAAAAAT
CTGAACGTACACGATTTAGGAAGAAGAAATGTGCAGTTCGGGTTGATTTTTATAAAATGA
AGGGGTGTCTTTGCAAAATGGCATACTCTCTCATTTGTGACCAAATCCGGGCCACTCTTT
TTTCATCTATTGGCCTAAAACTTAGTGGTGCAATGGATGCACATATTTGCTCGGTGCATA
GGATATGTCCTCCCGGAGCTCCGAGCCGCGCCGCCACACTCCGCAGCTGCCACCATAGCC
CCGCCGCAACTCCGAGCCGAGCACGAGGCACCACCCTGCCCCCGCGGCCTCCACTGTAGC
CCTGAGCTTGCGGTGAGCATGGTGACTGGGCGGTGAGCATGACGAGGCTAGGCGACGCCG
CGTGAGCACGGACGCCACCACACCGGTGCACATGTGCGGTAGGAGCACGAGTTCTCCATG
ACGATGCTGCTTAGTGGGGCGGGGACAAATAGCCGGGCGCGCTCCACCCCGCGATCGGCG
AGGCAGGTTCAACGGTGTGGCGGCAGCGACCTACGACAACGGCGAGGTTCGGCGGCGCAA
CGGCATCGACCTGCGAAAGCAACCAGTGGTCCAGTGAATAAAATAAAGAACAAAAAGAGG
TGGATGGATGACAAACGGGACAAGCCCGGACACACACGAACGAGGGGACACATAAATGTG
TCTTAAATTTGGAACGAAAATAGGTACGAACAAACACAAAGCGAATGTAAAACAGAAATA
AGACTCCGCGTTGAGTCATCTTTTTTCCGCGCAGAACCAACAAACACGTTCGGATGAAAT
GGATCGTTCGGTTAAAATTGCTCTAAATCCCCAAGCAGCAAAAGAACTCTCATTTTATTT
TGACACCGAACGGCTGCTAAAAACACTAGTGCTACATTGTCTTTCTCTCAATAGAATTGC
ATGCCTTTTCACCCGCAAAAAATAAAATAAAAATTGCATGCCTTCCGTTTTCATCTTAAT
AAAATCAAGACAAATTAGTCCCAGGAAGGAGAGAGAGAGAGAGCGCGCGCGCTCAACGCT
TATCCACCTCCTCCTCCTCCTGGCCAGGAAAGTCCACGGGAAGAGACAGAAAAGAAGAAC
AAAAAAACAGTGGGAAAAAAAGAGTCCGGGCTCCTCGAATCTCTCACTAGTTTTCTTCCT
TGTCTGCCTGCCCAGTGCCCAGTCCTCCGGCTCTGGGGTTGGTGAGCGAGCTCGCTCGGG
ATCAGTTGGCGACTACGGACCCAGAGCCAGAGGTCCTTGTCCGGGAATTATTTAGGCCGC
CCTTCCTCCCAGTTCCACGCCTTCTTAGCCCCGCCCCGCCCCGCCTGCCTTCCCTGCTTC
CTCTCCTCGGATCTCCGGCTCAAATCCGTCTCCCGAATCCCCACTTTCCAGCTTCTCGGA
GGTCCCCGGAGGCCATGGGCAGCTTCGCCAAGCTGGCCAAGAGGTGCGTGGAGACGGAGG
CGCCGGTCATGGTGAAGGTGATACAGGCCTCCCCACCTCCTCAACAATCTCCTGCCTTTA
TTATCCCCAAACAATTTCTTGTCTTTTTCTTTGCAGATACAAGAGCTGCTTCGAGGGGCC
ACGGATGTGATGTCGCTTGCGCAGGTAACCCCTGCTTGCCTGCCTGCCTGCAGTTACTTC
TTCCATTGTGTTTGTTCCTGGAGTGTTGTTTGGAGGGATCCTAGGCTAATGGTATGAAAA
AAAGATCGCGGAAAAGAAAGGCAAAATGTGAACTTAATGGATCAGTGAACCCCTATCTTG
TCTCTGTAAATCTTTCAACTTATTGTAAGGTAATTCAGGAGTAGGTTACACGTGATAACT
TGATATGTTCAACGTAACACGGCTATTGACTGTATATATCATGCACTGTCTTTTAAAAAT
GATTATATAATATCAAGCATGGGGGATCGGAGATTGACATGATTTACGCCCATGGGTTAG
GTTTCCTGAAATGGTGTTTGTGCGAAGTGATACACCCCACATCTGTTTGTGACAGAATTG
TGTCTGATGTTTTCCTATCAAGGCGAGCAGGCCATGCGTATTTACAAGAGATCCATCGGT
TGTCTTCTTGTAATCTTGGGCAAATCTTGAATGCAGGGAGTTGTTTATTGGCAACCTCCT
GAGACAGCCCTGAACAAGGTCAAGGAAGTTGTATGGGAACCAGCAACCAGTAAATATGGT
GCTGATGATGGCCTTCCCGAGCTTCGAGAAGCACTTCTCGAGAAGGTACTTCTTTTCATC
TGGAATTATATATTCCTTAGCATTGGATCATGTCCCCATGTTAGCAACCCTTGCACATAA
AGCCGTTACCATGCAAGACAAAAACACCCATGTGCCTTCTGCTAACCCACTGTCATGTGA
CTTCTTTACTAGAGGTATTTGATCTTAGTGCTGAGACTAATTGTCAATCCAAAGTATGTT
TTTCTGCTCATATACTTAGTTGATTAAAGGACAGCAGTATGCCATGTGTTTATGAGAGAA
AAATGACAGTGGGTTATAGAGTCGAAGATGTGGTCCACAAAGTTATAGAGTTGAAGCACC
ACGTTGATCAGCTTTCGAAATCATTAGCCCGCATTTTAGCTTTTACTGAAGTCAAACTTT
ATAAAGTTTGACCAAGTTTGTAGAAAACAATATGAACATTTACAGTAACAAATTTATATG
ATGTGAATCTATATGCAATGATGCATCCAATGGTATTGATTTGGTGGTGTATATGTTAAT
ATATTTTTCTACAAACTTGTTGAAAGTATTTAAGGTTTGACTTTATACAAACCTAATATG
CGGAGTAAATAAAAATGGAGGGAGTACAATAAAACCTTCAATGCTTATTTAACTGTTTGT
TGCTTACTGGGATAAGATTTTTTGTTGATAATATTTGGAGGATTACTATTGTTTAACTCG
ACTCTTGTTAGCCCTATCAGTATTTCTCTACATTGTCTTCTTGGCACTATAAACAGGTAG
TGTATCCATTGCTGATATTTTAGGGATTGTTTGCAGCTTCGCAGGGAGAATAAGCTAACC
AAGTCGTCAGTTATGGTGACTGCTGGTGCAAATCAGGTAAAACACATTACTTTTCATCTG
GTTTATCACGGATTTCTCGTGCCTCTACTTTTGCATTGTTTAGCTGTCAGACTATAGGTT
ATTGTCCCCAATTTATGTCCTGTTTTAGTTGTATGAAATACATGCTTCCGTGTACGACTG
CTATGCTAAATCTTGTTTTACAACTAGGTTTGTGCTATAAAGTGATCTCTTACACTGGTC
TCTTTTGTGTTTTGGCAGGCTTTTGTAAACCTGGTTCTGACCCTTTGCGATGCTGGTGAT
TCAGTTGTCATGTTTGCACCATATTATTTCAATGCCTTCATGTCATTCCAGATGACTGGC
GTCACTGATATATTAGTCGGTGCTAGCAATCCCAAGACTCTTCATCCTGATGTTGGTAAT
ATGACTACCGTACCTAATGTAAAAGAAATTTCCATGCTTAACTTATGAGTGCAATGTACT
TTAGATTATTAGATTAAGTGGTGCCATAGGCATTTGCTCTGCTATGACCTCTAGATGTGG
TCCAAGAAAATTTATACAGATCGACTCCCTCATCGATTTCTATTATAGAAACCTCTCGAT
TGAAATTTAATCTGTTTGGGATGCATATTTTACACTGCGCCTAAAAATGCAGATTGGTTG
GAGAAGACGCTGAAAGAAAATAACCCTATCCCTAAACTTGTTACTGTTGTTAATCCGGGA
AACCCATCTGGAGCTTTTATTCCCAAGCCTATGTTACAGGTTAACTTTCTTCCATCCCTC
CCTCACTCACATTGCTCTCTTGTATGCCTGCACACACCCGCACACCCAACATGAAGTTGG
CATTTGTTATTTCTAATATTGAATTGTCATTTCAGAGAATTTCAGACCTGTGCAGGAATG
CTGGTGCATGGCTGGTGGTTGACAACACCTATGAGTAAGTTAATACTGATATACTTGCAT
TTGTTTGTTTGTGCTTTCTAAAGCTCCTTAATCCTGTCCCATACTTAAAAAAATCAGAGA
AGTGCAGACATAATGTTGTATGCAAAACAATGAATCACATCTGAATATTACCACCTTAAA
TCATGGTTAGAGATTAGGAGAACTGGTTACTATATAAGCAAACTAAATGACACAAAAGTG
ACTTATAGAGTACAATTTTAATGTGAATGCATAAGCTATTTTGGAATACATCAGAATGTA
AAATGCCATTAGCATCGTCTTTAAATAAAAGTGGATAAGGTAATTAACTGCTAATGATAT
TGGTAGAGATTGTGAGTAAAGGTAATGCTATGAACAGTTCAATAGAGTCTGGAACTGCTA
AGATAAGGGAAATCTATGCCGTGCAATGATTTGTCAAATTTAGTTAGATTCTCCTGCTCA
TAAACTTCAGAAAGTCCTCCTAATGGTGGCAACTCTAGCAGAAGGATTGATGTTTTGGGT
CATACCATGCTAACAACCTGTCTGTCCCCCGTCCCTCGCGTTGAAGCGCATCTTGGCCTC
ATTGGAGCCTGTGACATTTGGTAGTGACAAGCTTGTCTTCCACCATCCATTCATGCATGT
AGCGTTGCATGATTGCCTTTTTGCCCTTTATTGGAATGCTAGTGATTTTCATTTGCGGTA
TCACCGCCACGAGCCTCTCTTGGTTGATGTACAATGCCTTAAGCAGGTATGAGGGAGGTT
GACGGCACATCTATCGATTGAACCTTGTAAAAAGATCTACCTTTTGATGGTGTCGAAAAA
TATCCCCTCCAAATCACTTCAAGGTCGATTAACTAACAGGTTAACCTTTAGGAGAGTGTT
TTAAAAGTGAAGGGATTAGAATGAATCCGAATCCCATGCTGAGTAATTAGTAAAGGACTT
CCCCTTGCAGCCTCCAGAAAGCAATCCCAGATTAGGCTTGTTCTCGGGCAGCGTGGTGAC
CACTAAGTGGCATCAGAAAGAACAGGATCTGTACTTAGCCCTGTGATCATGCAATCAATA
TTTGGTTTATTTGTCTCATACTGAGTCCCTTTATCTACATCGCATATCGTTCTACATCTG
TACATGACTGGCCCAAATAGTGGACTGATGAATGTTGATATTGGTTTTGCTATTTCTTTC
CCTGCTGCTGATATTGACGATTCTTCGCTCATGAATCGCACTACTAATAATTTCGTAAAT
ATAAATATGTATGGACCAACACATGTAACACAAGGGTTTGATGTGGAGACGTTCAATTCC
TCAATATTTTGTAGACAATTTGTATTATACAGCGCCTGTGTTTCATGCATATTCTAAATA
GTATTGTAAATAATAGAATCAAAACATGTTGTCTTTTGCAATGGTTTTAGATTCATTACT
GCACAGAAAATGGCTAATCTTCTATGTTCTATAAATAAATCGTGCGTAGTGCCTGCAGTC
CAGTTATAATATTTTCGCTTTGACTACAGTATTACTTAGATCTTGAACTCAGTTACAAAA
CTTGTTGGTCTTTTCCAGGTACTTTATGTATGATGGAATGGAGCACTACTGCCTAGAGGA
TGATCACATTGTCAACCTTTTCTCGTTCTCAAAGGCTTATGGAATGATGGGGTGGCGTGT
AGGATACGTAAGCGTACCATGCTCTTTTCTATCTTCAGTTGCTTATGCTTCAGTTGCTGC
TATACAACTGAATACTGAACCTTTTTGGTATCATATATCCTGCACAAGTACTTTAGTTGT
TGCTAATCCGATACTTTTGGACCAGTGAATGCATTATTTCTAAATAGACAAGGCACTCTG
CAATCTGTGTAAGTAGGAAGATGATCAGTTAGTCTTACAAGAGCTGATCAATTGACTGCT
GCAGATTGCATATCCAAGTGAGGCCGATGGTTTCCATGCGCAGCTCCTTAAGGTGCAAGA
TAACATACCAATCTGTGCTTCCATCATCGGGCAGCGCCTGGCTCTGTACTCATTGGAGGC
TGGCCCAGAGTGGATCAGGGAAAGGGTGCAAGATCTCGTGATAAACCGGAAGCTGCTTGT
GGAGGCAATGTCTCCCCTTGGCGAGGATGCTGTCAAGGGTGGGGAGGGTGCCATCTACCT
CTGGGCTAAGCTACCAGATAACTGTAAAGACGATTTTGAAGTTGTCAGATGGCTCGCGAC
CAAGCACGGCGTCGCGGTGATCCCCGGGAGCGCCAGCGGAGGCCCCGGATACATCCGCGT
TTCCTTCGGAGGACTGAAGGAGGAAGGCACGAGGCTCGCCGCCGAGAGGCTAAGGAAGGG
GCTGCAAGAGCTGGTGACCGATGGAATGGTACAGTAACAACGGCCCATTGTATGTAAGAG
TACATTTCTACATTCAGACCACACGAGCCCGATTTTTAGCGACGATATGATCCTGCTGGG
ATTTAGTTCATTCAGAGGAGGAAAAGCACCGTAATGTGCAAGTGCTTGTATCATACTACA
GAATAGCCCTTGCTGGAGGTGCCTGATGGGGATGGCAATTGGTGTACTGAGAATTGGGGC
GAAATAAACAGCCATCCAGGCCGGTGTCGTAATTCTCTGTCTGGTGCTTCCTGCTGTTTC
ATTTACCCCTTTTCCCAGCAAGTATACACAAGTGAAACACGACAATTGTAAGGCGATTTT
TACACGCTCTGCGTTGCTCGAGTTGTTTGTTCTGCTGTTCTTGGCTTGGCTTGCAGTTTC
AGCAGAGCCTGGAAACTGAAAACACCGCAGTTTCGTATGGCTGACAGAAGTGACTGCTGC
TGCTTCGACAAATAAATCTAACAGCTCGTTTGGTACCTAGGCTTTCATTTCATTTGGTGG
AAATAAAATGAAAACACATTCCTGCAAAGATTTCATTCGGTGGGATTTGGTTTCCAAGTC
CAAATTTCCTATTTGGCTGCCATATTGATTTCCGAAGAAAGCATGTGCCAAGAACGGAGC
GCGGGGAGGAGCAACTGGGGGTCATCGGCTGCTGCTCCTGGCAGTAGGATGGAGCGCGGG
GCGGAGTAACTGGGGGTCGGGGGAGGGAAGGGGGGAGGCGAGTAAGAGATGGGAAAGGAG
AAGAAAGGAGGGAGAGAGATCAGCGGAGGAGGGAGGGCTCGCTGGTGGCGGCGAATCGAA
GCGCCATAGATGGGGAGGAGCGGGATCGGGGAGAGAGAGTGGTCTCAGGGAGGAGGAGAG
CTGCGGCAAATCCACAGGAATGACGGGGTGGAGGCAGAGATTAGGGAATAGTGCGGCTCT
TGGGGGGAGGGATTTAGGTGAAAATGATCATTCAATTCCAATGGTTAATTCTGTGGCAGC
CAAACAAGTAAAGACCTGGAATTCGTAAATGAAATCCGCCAAATCCGGCCGAAATGATAG
GTACCAAACGACCTGTAAGTGTTTTCTATCTGAACACAGAACACCCATGAACCATGATAC
GAATCGATCTTTATAAGAAATCATCGCGTATATCTTTATCTTTACCTAATAATA
