Contig Data
morexGenes
Links



Map Locations of contig_159520 (5067 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_159520

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21444 1 202 bp MLOC_21444.1 Available Available None
MLOC_21443 1 182 bp None Available Available None
MLOC_21442 1 701 bp AK374555 Available Available None





CDS Structure of MLOC_21444






CDS Structure of MLOC_21443






CDS Structure of MLOC_21442






Contig Sequence (5067 bp)

>contig_159520 5067 assembly3_WGSMorex_rbca.fasta
CGGGACCAATGGCCCCCGATGCCCGGTCGGCGCCCTGGCCTCACGAACCGGGACCAATGA
CACCATAGGTCCCGGTTCGTGTGTGAACCGGGACTAATGGGATTTCAGGCCGTGGACCAA
AGCCCGCTTTTCTACTAGTGAGCTCAAGCGATCCAGTTCTCGACAGCTGTCGCCGCCCCA
CCCCCTCCACCTTTGCCCCTTCCCGCCACCGGAGGAAGTCACCGAGCTAAGCTTGCGTGG
ATGATGGCGATGGCGGGCCTTCATCTCCTCGCACGATGGTTGGCGGCACGGGCATTTCGT
CCCATGCGGTGGGATCTCTGGCTACTACAGACTAGCGGCCGTGGACGTCGAGGTGCAGGT
AGCGGAAATGGACGTCAGGGCGGCAGCCCTGATCTTCTTCGGTGACCTTAACGACCGCAA
GCACAACACAACGCTTGGTTCAAGGAACTCGGCAAGGCTAAGACCCTCATCTTCGGATTG
TGCAGGTGGTGATGCGGTGTCCGCTCAGATCCCAGCTTGCTATTGGGAGCTAACGGGCGA
GGGCGTGGGGGCTTTCTTTCTTCCTAACAAAGGTGATGGTCCTAGGGTTCCTCTCGTGCC
AGGACAAAGATCGGACTGGTGCTTGTCCTCCTTGATCCGATGAGAGTGTCAAGTTCCAGA
AGGCTCCACCGACGAACTTCCTTGGACGTCTCGTGATGGAGATTTCTGGATTGGATTGGA
TTCGGTCGTGCTCACCCATGTTTTTTCTGGCCGTTTGGTTTCTGGTGGGTGCGACGTGAA
GCTTTGGTATTTTTTGCCATCACGAGGCTTGTCTTTTTCGTTCCGTGGTGAAGTCAGAGG
CAGAGAATGTCATGGAAGATGTGATATCACTATATGAGTACTAGTAATGGTGGTTCAAGT
CATTGCAATGATGAGGAATTTGCTTGGTGTTTCAAGACTCGTAGCAGCGACATGCAAGTG
GGAGCGGCAACACGGGAGAAGTTCAAGATCTTACCTTTCAGGTGAAATCCAATGTGTAGC
CTTAATTGGTTGTGCCTGGCAAAGATCATTTTAAAGGCATTGTTTTGAGAGCATGGACTT
TCTTTACGATGAAAACCTATGATCTATGATCGAGCCACGATAGCGTCTGTGCACTGTTTC
CTTTTTGTAGGCGTCTCTTATAGAGAATTTGAACTTCAGGTGTTGTCTTGGTGGTGTTTG
TACTGCTGCTTCAAGGACTAGATCACTCTAGTGGGACTTTTTTTTAAGCTTCTTCTTTTT
TTTTTGGTTGTATGCATCCGTAGTGCCATGAGGGTATTGCACTTATTGGAGAGCCATGGT
CTATTTGATATCTTCGTGATATTAATATATTTCGTTTGTCAAAAAGTAAATCACAAGATT
GGAAATGTAAATGTGAACTGCGTAAATTACATGTATGCAAAAAATCTAGGTCACACAAAT
AACAACACTACCATGTTTTTCAACACCGGACACTCCACCTCTTCGAAACTATCAATCTCC
CCCGGGGTATCGACCCCCTCGGTTTGTAAGCAACATATATCCAAACTTTTGTGTGACACT
TTAAAACTTTAACCCGTTATTCGAGTGGGCACATAATGACGGCATGCAAAGTTTCAATTT
TTTCCAGACACCATTTACTATTTAAAATTCAAAACTATTTTCAAAAAATGATGTATTCGA
ATAATCAAACAAAACATTGGATTGTTTTAATTAATTTCATCAAACACGACTAAATGTACA
ATAAAAAAAACCTTTATATGCTTGATGTACACTCCACCTGGTTGGAGTAAAGAAATAAAG
CATCGCATGTTGCTGGCATTGATCACTGCACCGCCTGATCAGTACATATGACGGTGGAAA
TTAATACTACTTCACTAGTCATAGCTCCTATAACTTTGCTTTTAGCGATGCATTACGTGG
TAGATGGATCGATCGATCGTACTCTGAATTTACTCCATATCATGTTCATGTCCGTCTCCC
TTTTTTTTTTTTTTGAAACGAGATGTCCGTCTCCCTTTTTTGTGTTTGATTGACAACGAC
GGCTCACCTACTCATCACCGGCCCTTCGTCCAGATCTACACACTACACTGTGGACTGTGG
TATAGCTCGCACACAGGCTCCATACGTTCACACGAAGAAAACCACGTAGGAATTATTTGC
AGAAGCTTCTGCTCATACTTTTCGAAGAAAATAATGTATAGATGTGAACAAACAAATGTC
ACATGCGTGCAGTGGACGCCACCGGTCGATCCATCGTACGCACGGTCCCTAGCGCCCAAC
CACCGCCATGCGCATGCATGCATGCACGCCCCACTAGCTACGTTCGACGTACGCGCACGA
CCACGTGCATGCACGCACCACCGTCCACCGCCACCCTGCAATGCAACGCTCCAACACTTG
CCATCTCTCGCCAGCCGGCTATTTATACCCCGCTCCACGGAGTTCCTTCCATCTCCACCA
CCACCACCACACAAGCCAATCAAGCTCTCTCAGCTCCTGCCTAGCTAGCTCCACGGTTTC
CAGCAAGCAAGCCGAAGCACGAGATCCTCCATGGCACGCGTGGCACTGGTCGCCGTGTTC
GCCGTGCTCGCGGCACTGGCGGTGGCGGAGATGGCGTCCGGGGCGGTGACCTGCGGCGAC
GTGACGTCCTCCATCGCGCCGTGCATGTCGTACGCGACGGGGAAGGCGTCCGCGCCGTCG
GCGGGGTGCTGCAGCGGGGTGAGGAGCCTGAACGGCAAGGCGTCCACCGCGGCCGACCGG
CAGGCGGCGTGCCGCTGCCTGAAGAACCTGGCCGGGTCGTTCAAGGGCATCAGCATGGGT
AACGCCGCCGGTATCCCCGGCAAGTGCGGCGTGTCCGTCTCCTTCCCCATCAGCACCAGC
GTCGACTGCAACAAGTACATCCTCCACTACTAACTTGAAATATATGTTCTATTACTCATT
AGCCATTTGTTCTTTAATTAGTAAGCAAATAGTGGCACTAATCATTGAGCATCTTTGTAT
ATGTGTTTGCAGGCTTCACTAAGTTACTTATGAGCTTCATCACAGCTAGCCGACTCGGTG
TCTACTGTTGCTGCTTTCTGCATGTGTTCGACCTCCATCTTGCAGATTGTTGATCGAATC
ATCAATAAAATAATGTGTTGAGCTTAATTTTGTATGATGTTATCTGTTATCAAGAATGAT
TATAAACTAGTCTCATGCCCCATGTTGATGCTGGAAATTTTAGCAAGTGCTATTAGCGTC
ATTGATAATAACATGGCACATTCGTAATTTTGTAACTAAATGCAAGAACAAGAAATACTT
GCCGAGGTCAACTTACTGAATCAAGCGATGATTTTCTGACCACCAGCAAAGGCAACATAA
CTAACTTGCATATAATTCTTATACGAGATAAAATGAAGATGTTGTGTTCATGCATCCCTT
CCAAAGTAACAATCTTTGCAACATGAGATACTATCAAAAGCGTGATACAGCGATACAACG
ACCAGACCAGAGCAGCGGCACCACTCTCCATGAACCTGCACAAAATTGGCTAACTTTGAA
GATTTCCGGAAACCCCTTTAGTTACCCTTACCTTAACTTGGGCCGAGGATGACCCACGAA
AATTAGAGGTCGTTGAACCACAAAATCCATAAGATCAAACCTGCGGTGACACCACATCTC
TCGTTCTATGGCGATGTTCAGTAAGGCACCACTGCATCAAAGGAAGAAGCAGAGCACTTT
TATTCTAGGCGGTATTGCCCTATCTACGTAAATATCACCGACAAGGACCATAAAGTTCAT
ACTACTGTAGACTACTGAACATTCCAGTGGGCCTGATAATATTGTAGACTTCGCCGACAA
GGACCATATAAAGGTATAAACTCTTGTCGCCATCGCCTTGTTTATTTTCCTAGGCAAGGT
TCAGGAGGAGAAAAGCCGAGTGCGCCTGATTAGGCCCAGTTTGGTTTTGGATAAGAATTC
ATATTTATTTATTTATTATTATTTCTCAACTTTTCTAAATAGTTGAATATAGTATTATAA
AGTCTAAAAAAACCAAGAAAAATTATGGAAATATTCACATGTTTTATACTCCCTCTGTCC
CAAAATTCTTGTCTTAGATTTGTCTAGAGATGAATGTATTTAGTCATGTTTTAGTATTTT
GATACATTCATTTCTAAACAAGCTTAAGACAAAAAAATTGGGACGGAAGGAGTATATGTT
AATTCCAACTACTGGAATGTTTCCAAAAAAATCCAATGGTTATTTGACTGTCATTTATAT
TCAAACTAAGTTCTGGTCCCAATTTCAATTTGAAATGTAAGTAGGTGAAATGACCTCAAA
GTTGATGATTTTTTTACTAGAACTGCTAACTACCATATAAGCCTCAGATATTGATTTTCA
TTCAATCTCATCAAGGAACTCGTAACCAACAATATAATTTATAAATCTATCAATGTTAGC
GTTTGAATAATTATCACTTTATTCAAATACGAAAATTATTTAAAATAACTAATAAAATTA
ATCAAAGGTATTATGGCATGGAGGGCCTAGCAAAAATAATAGTACTCCCTTTGTCATGGT
TTAGAAGGCGTGTCTGAAAATTCTCTGGAACCTAGATGGTTATTGATTGGTTATGAGATG
TGTTAAAAAATAGCATTCACACTACGCATGCATATAGAAGTAGTACAACAGAGTACTAAT
TAGCTGCTAGGAGTAAATGCAATCCGCCCTAAACCTTGTCTATTATGAAAATACATGTAA
TTTAACCGTGCCTTCTAAACTGTGACGGAGGGAGTAGGTCAATTGTTCGGTGACATTTAC
TTCACAATAATAATTTAAGAACTGATTTGACTACTCCAAAGTTTTTGGTTTACTAATGTT
TTAACTATGCATCCATATGAGGATGCCATGAATTGAGATGCTTTATATTACATGCTGATT
CCAAAGTCCCTGTCAACAAAGTTTACAACATGGGTCACTGTACACGGCGTGGGTCCGGCT
CAAGGAGCTAAACTAGGTTCGGGTGCGAGAAAACCGTTAGGAGAAGGGAAACGTTTCTGG
GCGGTGCGTCGGCCGAACCGTTCGGCC