| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_159481
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_21396 |
9 |
1690 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_21396
Contig Sequence (9705 bp)
>contig_159481 9705 assembly3_WGSMorex_rbca.fasta
GTTGAGCTACGAGGCGAGCCTTGTTGCATACTACTTGTACATCTTCATCTTGCTTGTTGT
GAAACACCCATTTTGTTCCAATGATGTTGTGCTCGTCCTTGGGTTTCTCCACTAGAGTCC
AAACTTGATTCCTCTCAAAGTTGTGCAGCTCCTCTTTGTGGCAAATCGAGCACCTCCTCA
GTTCATTTACGGTTCAAGAGGATGTGCACTCGCTGGGCTCGACGACTACGACACCTGGTT
ACACAGAAACGGCCGCACTCGAGATCATGCCTACGAACAATTCCCCTCGACCTCCACCAA
GATACCACTTGGTCCCTGGTCCAGCCCACCCGATCTGTTTCACACACAGGGTAATGGAAC
ATCAATTTCCAGATGGGTTTAGGCCTATTAACATAGAACCCTATCATGGCACAGCAGACC
CAACAGTGTGGATCAAGGATTTCCTTCTCCACATACATATTTCTAATAGAGATGACCTCC
ATGCCATCAAATATCTGCCGCTCAAGCTAAAGGGACCGACTAGGCACTCATGTAACAACG
TGCCTCCTCATTCCGTCGGCATATGTGAAGACCTTGAAGATGCCTTTAGGGCAAATTTCC
AAGGTACTTACGTCCGACCTCCGGATGCTGACGACCTCAGCCATGTCATCCAGGAGCCAA
GTGAATCTGCTCGGAAGTTCTGGAATAGGTTTCTCACTAAAAAGAATCATATTATAGATT
GCTCTGATCCCAAAGCCATCGCCTCATTCAAAAATAACATCCGAGACGAGTGACTTGCCC
GCCAGCTCGGCCCAGACAGGCCGATGACCATGTCAGCCATCACTTCACTAATGACATGCT
TTTGTGCGCGAGAGGACAGGTGGCTCACGCTGAGGGGCGACAATGGCAAGGCAGGCACCT
CAGAGACACATGACGCCAATGGCAAGCCTCGTCGCAATAAAAACAAGCGGAGGCATAAAA
TTGGCGGAAGCAACACAGAGGACGCCATAGTCAATGTAGGGTTCACCAGACCCAGATCCG
GGCCAAATATAAAACCCTTTAAAGGGAAATATCGATGAACCTACCAAGCCAGACATGACC
CTAGATCATCCGTGCCAAATCCATGGCACCGAGGACAAACCGGCAACCCACACTAATAGG
AATTGCTCGGTCTTCAGACAAGCTGTCAAGGTAGCGATAGAGGGTCCTAATAAACCCAAA
ATCGCAATGAAGATGAGGATGAACCTCGACGGCCCAATAATGGAGGCAAAAATAAGTTTC
CTAATGAGATAATAGAGGTAAACATGATCTATGTTACCCACATCACCAAGAGAGAGAGAG
GGAGCACGCACTTTGGGACATCTACGTGTTAGAGCGAGTTGGCCCGAAGGTCAATCCATT
ATCGACTTTCCCGATCACTTTTGACATACATGACCATCCAGCTAGCATCAGGCATGGTGG
TTCAGCTCCACTCGTCGTAGACCCAATTGTCGATGGTTTCCATCTGATGCGCGTCCTTAT
GGATGGTGGGAGAAGACTCAACTTAATCTATGAGGACACGATTTGGAAGATGGGCATCGA
CACATCTCGGATCAAGGCGAGCAAAACTACCTTTAAAGGAGTCATACCATGTGTTGAGGC
TCGTTGTACAGGAACTGTGTCACTGGAAGTTGTCTTCGGATCACCCGAGAACTTCAGGAC
CGAGGATTTAATCTTTGACATTGTCCCCTTTCGAAGCGGGTATCACACACTCCTAGGGCG
CACATCGTTCGCTCGCTTCAACAAGGTCCCGCATTATGCCTACCTCAAGCTTAAAATGCC
AGGACCTAGCGGTGTCATCACGTTCAATGGAAACACCAAACGCTCCCTCCGTACCTAGGA
GCAAAACGCGGCCTAAGGAGCCGAGCTGCAAGCATCCGAGGATGGGACCCATGGCGGTAA
ACACACCTCGGGCTCTTCGAAACATTTGCGGGCCATGCCAGTCGACCTCAGAGACATACC
ACAACACCCTAAATAGGGGCACATGCTCCTCGTGGGCCCCCCTTTAAGGGGTATTACGTG
GCCAGGGTGCACAGTTTCTCACTAAAAATTCCTTTGGCTGCCAAGGAGCCAAATCTTATG
GAAATGCCGGATCGGCTAGATCATGGAACGACTAAAGCTTAGATCTTCTATATCGACAAT
GCCCTATCAAGGAGACAACCAGAAAAACATACTCATGTGACATTAACCACACAATGGACA
TGTGTAGACCCCTTAAAGGGACTCGACCAACAATCACTCTTAGCACATGCGAGGCTGAAG
TCGCAGACCGTTCGTGCCATACTTCGACATCAACGAAGATAAGCTGCTCAACAGCATGGA
GACGTAGACGTGCGTGAGGAAGCGGCCTGGGCTTATAAACCCAATGATAATATTCACCCT
GTTTACTTTTTATTTACTCCTTTATTTTCCTTACCGCATTGTATCTTTAGTTTCTCTCGT
TACAGCTCCACATGTAAAGCTTGAAATTATTAAATAAAGAAATCATGCCCTTCAAGATCG
TCAATATAATTTTGTTCAAGCACTGCCTGTGAGCTATGAGAATGTCTTAAAAATACAACT
GCTTAAAGGACTTCGTTTTCTGTGTCCTATATACAAAGTCTGAAGTACTCATCGTCTCGG
ATGCTGCACTAAATGCGTCAGTTTTGAACCTAGATTTCGGTCAATAGTTGGGTTGTCTGG
CTCCTATGTGTACCCCTTACGTTCCCGGCTAAATTAGGCTAAAGGTGTAACGGGAGAACC
ACTTGCGATTGTGCCGCCAGTTGACAGAGTGCCTGAGTGGAAAAGCCGAAAACTCACTAT
CTCGATAAGCATAAAATGGTCGGCAGTCCGAAGACCGTGTTAAGCGACGTGTTGTTATAG
GTCACCCGTGTTAAACAAGCGGCTTATTCTTTGCATAAGTTGAAGTGGGTAATGATGTCG
ACCTCAACTGCCTACAGCTGACCACTTCACACACCACGGTATCGTCACAAGCCCCCACAT
TCAAACTCCTATGACTAAGTGAAAATAATAAAGTAGTAATAGTCCGATTGCCTAGTTCCT
ACAATGCACGAACTGCCTTCGGTTACCTAGACACCGGCTAAGGGCGAGAGTTGCATCAAG
GAACACCCTCTGTATACTCTACATTGGGGCAGAAGCTCCCGACTTGATACACATGTCTTG
GAGTGACGGCCTCGCCACACGAAGTAGCTCCGTCAACCGCTTCATCTCATCGTTCAGCAG
TTGTGATGACGTAGCATCCGGGAACTGTTGCTAGAATGCCTTCTCCTCCTCGTGGCCCTC
CTGCTGGCCAAAGTACTGGAAAACTTCTGCCATGCTCTTCAGAAGATATGCTAGAACCTC
TACGGAATTCCACAACGTGGTAAGCTCGACACACCCTTCTGTGCCAAACACACACTGCTT
TAAATATGTGGCCCGCGGGCACTTGCTTCACTTCCCGAAGCTCCTAATGGTTGGAGCACG
TTGCGGTCTGGAGTTTGGAGTTCGCAAGCTGAAGATTCTTGAGCCCTTCCTTCATTTGTG
TGCCCTTTGCCTGAAGTTTGTCGCGTGTTTCGTACATGCCCTTCAGGGTCTCTTCGAGCT
CCTATACTCACGCTTGGTCCCTTTCCCGGGCGACATTCTTGACAGTGCACGCCTCCTCTG
CATTTGCAGACGCAACCTTTTGCTGCTCTGCGTCTTGTCGATCTTCTTTAAGCTCGGCCT
TGAGCTGCTCAATCTCGGCCAACGCTGTTGTCATTCAAACAGATCGACATTAGCCACTAA
TTCGATAACAACATGAAGTACGCTTATAATAACTTAAAGTAATATTCAGAAAACATGTGG
TTCTACTCGTATACTTTGAGACTGCTCGAACTTTTGGTTCATCAGGTCGAGGTCCTTCTC
GGACCTCTCAAGCTTTCTAATTATCTCTGTTATCTCCTTGGAGATGGAGCGTGTAGCTGA
GGTAGAAATCTGCAATGGAGAGTTCTTTGCATAAGCCTTACGGTAAAAAAATCCAACCTC
AGACCAAAGCTTTAGGCAGCATCGTGGGGGCTATTTGTCAAGCTATTAGATCCCAACCTC
AGATCTTCGAAACCAGCCTTGGTCTCAGGTCTACTCATTGACGACGCCGTATGAAAGGCT
GTGAGAAATTTTCCTCGGGTAGATTTATGGATTTTCATCTCAAAAATAAAACTACTTGCT
CAAAGGATAAAAGAATACCTCGAAGCTGGAAACGAGGCCCTTGAAGACCTCGTGCAATCC
GGCATGCAGACCGGATGCTCTATAGGACTGTGCCTATCAAGACATGGTGTTCTTCCTTGA
GGGAGGAGCCCTTCATGGTCTCATCTACCTCTTCGGTCTACCCTGTCCTGGAGCTCCTCT
AGCCAGGAATTAGAGGTGGCATGACCTCAGATCCCAGCACCGGGGGATTGGGTGGAGGAG
TCTTCGGCCATGGTGCTTGAGCCCGGCTCGACTAATGATTGGTCCAATGGTTCCTTGTGA
GCATTCAGAATCTTGTCCCTTTGGCTAGGCGGGACCGGGGCCTCAGCCTCGACCATGACG
GTTGACCCTCCAGCCCCTGTTGTGTCATCTTGGGGGCCTAGAGCAGAAGTCACCTCCCCC
GGTCCGTCACAAGCTGCCAGGGAGGAGAGGGGTCTAGAGATCCGCTGGGGGATGGCAACC
CGCTCGAAGAGTCGCTCGGGCACACCTTTGGAAGACTGTGAGAAAAACACTTACGTAAGT
TTACTCCTATTCAAACACTATCTTAATGGAATACGAGACATGAAAAACAATGGCATACCT
TCAGGGCACCGGTCTCTTCCTCCCCAGAACAAGGGAATCATCTTCCAAGTCATCGAAAAG
CACGACCTTCCCCGACGACTTGCCAGTAGTGGCCTCAGTGAGGTTTTCTTTAACCTCTTC
TGGCCTTTTGTTCGTGCACCGACCTCAGTGTCCGCTAGCGCCACCCTTTTCCCTTTAAGG
GAAGGATCACCTTCCTCCGCGTATTTGTGGATGACATAGGTGTGGGTCTCAACGGACCGA
GAAACCAAGGATTCCCGTTTCCGAAAACCTACCCGCCCCCTGGGGCTTTGTCTTCTTGGG
GGATACCACGTGAGGCTCCTCGACCAGGAGCACTATGAGTTGAGGAGTTCTCCCCCCTCA
GGCAATGGGGCCGAGTATTGCATGGCCAACATTTTGGCTGACTAATTCTGTACATACCAA
AGCAAAATGATTCATTTAGAATCGGAATCACCATGAGTGGAAGAAAGAATACGAACACGT
GTATGTTAGAATACTTACTGGTGGGGCTTCGTAGCTGGCTTCGAAGCCGCGGTATTATCC
ATCCTTGGGGATGTCATCCTCGCCTACCTCAAATAGGCATGTCCACATTCCGGAGGGATT
GGTGTGCAAGAAGTGGCTATATGGTCCCATTTCCTCGGGACAACATGCCCACATCGGCTT
TTCCCATGTGGGAGTATCCTAGGGTTGAGCATGATGTTGACCACGTCAAGCAGCCCGAGG
TCCTTCTCAAGGGACCCGACTAGATCCTCCCGACGAGAGCCTTCACCTCGCTGGCGTTCC
CCCAGACGATGCACTTCTTCGTCCAGGACTTGAGCTTGCGAGGAGGTCCAGCCGAAAAGG
CAGGGAACTTAACTTGGCTTGGGGCAAGCGTCGCGGTGATATAAAACCACTCGTGCTGCC
ACTCCTTCACCATATTGATGAAGGTACCCTTGAACCAATCGACATTTTGGTTTTTACTAA
CCATAGCCTCACCACACCCCGCCAGATTAGGCCCGCTGGATTTCGGCTTGATCCCAAAGG
TTTTCGTCAAGACACCGAAGTGCGGCTCATAGTGAAGGAAAGCTTAGCAAACTGTGATGA
AAGAGGCGAGGTGGAGGATGGAACTTGGGGCCATGTGGTGGAAATCAAGCCCATAATAGA
ATATTATCCCGTGTACGGAGGGGTGCAGTGGGAAGCCCAGGCCTGAGATGAGGTGGAGAA
CGAAGACTACTCGTTCCCATGCATTGGGAGCGGGCACTTGTTGATTAGCGCTGGGAGAAC
GGGCGCCAATCTCCTTGGAGAGGTACACGGCATCACATAGCTCCTAGATGGTTCCATCTA
TAATGGAGGAACCACCCAGTGCCCTTGGAGTGTATCGGCCATGGCTGGAGGGGGAGAATG
GATTTCACTAGAGAAAAAGACGTGACACTGGATCCGGGCGATGGGGCTCGATGAAGCAGT
AGGCGGATGAGGATATGAGAGCGTTGTTTCTTGCATTTTTATCTTTACACTCTTATAGGT
TGCTGAGAGGCCAAGAGTCCCTCTTACCGTGCCGATAAAAATGCCACCTCCACAAAGATA
CAATTATGCCTATGGGGGGAAAGGAAATCTTAATGACATCCCTAATAAAACAAGCACGAT
CTCGACCTCGATGGGACGTACGAGTAAAAGGGGTGCCTCAGGCCGCAATTTGAGGAAGGA
AGGGACCGCTCGACCTGTCATGGGATGTGCCACTTTGATAAAGTTGTCAGGTTAAGTATC
ACTATTCGTACCTATGCGGATGGCCTTCGAGGCTAAGCTATCTCACCTCCTAGGAGAGAG
GATGCATTTGGTTTTGTCTTATTATAAGACAATGTTTCGTTCGAGAGTTCGGGCATTTTA
AAATTGTGCATGGGAACTCGTTTTTCAAGACAAGGCCTTCGGGACCGAAGATATAATCAT
CAAAGGAATTTTCCTCGGCATAGAATACCAGTTTTGGGGCTACTGATGGTGTTCTAACCC
AGTCGGCCCATACTCCTCGGATCGGCCGAGGGCCCCTCCGCCCTCTCAAGACGGACTCCA
TAAACTACACGATGAGGCATGAACGGGACTACATCTACCGAAGACTTAACGTATACTCCA
AGGATCCTCCTGACACCGCTTTCCCCGATACAAACCTTGTAACCCTAGATAACTATGTGG
CGTGTATACGAGCCATAGGGTTTTAGCCCGTAGAGGGGACTCGAACACAACATTACTCAC
CTAGATCTAGGGTTAGGAACCATCACACGATCTCAAGGTTGATCAATTATGTACTCGATA
CTTGTTCATTGATATAAACAAGAGCAACACGTAGGGATTTACCTCCATCAAGAGGGCCTG
AACCTGGGTAAAACATCATCTCCCTGTTCCCGTTACCATCCATCTCAGATCCACAACTCG
GGACACCCTACCCCAAGGTCTGCCTGTTTTTATACCAACAACCAGGCTCACCCACAATGG
GACATATAATACATCTCGGTGCACCGGCACGCAGTACCACTTGGAGTTCTGCGTGCCACT
TCCATGGCCAGATGTCAATCTCCTGCACGGCTAGCACCTGGACACCATATTCCGGGGCCA
ACCGTTGCCACAGTCCAAGCAGGAACACACAGAGGAGACCCGTAAGTGGCATCCTCTCCT
CACATCGGAGCAATGCCACGACCCTGTGTACGTGCGAGACTTCCCCAACTAGGACGTTTG
GTCCACCACCAAGCACGACGTGCACCACTAGGGGGCCACCTAGATCGACCCTGACTTTGC
ACCGCCACCATCGGTGGTGTCTCAAGAGGCCGAGGAGGTCGAGGTGGTGTACTTGGATGG
ATTGTTGAGGCCTACCAGAATTCCCTCAAGGAGTCCAATTGCGAGGAGGATGCCCGTTGG
CCTGTCCTCGATGAGGCACTCCAGCTCTATGTGGCAAGGTACAATATTTGAACTATTACT
TGTTTCGGTAGTTGAACCAATTCCTCTCCATGACGTGTCATTGACATAGTAAATAGCTAA
ACCNNNNNNNNNNNNNNNNNNNNNAGATGCTTGAGCCATGATGTGCTTTTACTCTGCTAT
GCTTGCTATGCTTAGAGTTGTGTTAGGTCTGATTCATCTCGGTGATGAACCGGAGTGAGA
TGAATGTGTTTTGGTGACAAGAGTTAAAGGTGGAATATGATTTGGTAAAGGTATCGATGA
GAGGCTGTGTAGGAGTACATGGCGGGTTATCTTATTGGAACCGTTCTTAGGAACCGAGTC
CTGTGTATGTGATCCAAGACTAGCTACTACCACATGTCGGGATACTTAATTGACCCTCTT
GGCTTATTAAATGACTAGTACTTTGTCTAGGAGTTGCAAGTAGTTTCTGGTGTTTGTAGC
TTATGCTGGGGCCGTGCATAGCGCTGACCTTAGGGGTGGGCTATGACACGGTAGGCACGT
GGCATGGTGTACCAAGTGGCACCAGAATGGTTGGCTTGGGTACCCTGAGCACATTGTTTG
AGGCCGTAGCGGTAACTTTGGTCGGACTTCCATGCGGGATCAGTCTCCAATAGGCGATAA
ACCTGGACTAGGTGCTTGTGTGGTCAACGGTCGTGGCCGACTCCCTCGCTAGGTCCCAGT
TGAAGGTTGCCTAGGTGCATGATGGGCACATGGAGATAACTGGCGAGGGCGTGTGTGAAG
AATTACACCCGTGCAGGGTTATGATATGTTTGAATAGTCGTGTCCTCGGATATGGACTAC
TTGGAAACATATGTTGTTCGTAGATAACTTTAATGGTTACTCATAAAAGTATCAAGACAA
GTGTGAGTACCGTTGATGGCATTCTCGTAGGAAAATGGGAAAGAATCCATGGTAGTGTTT
TGTTGTGGTGTTAGTGGACTCATGTATGCTTTATCAAACTTGTTCAAAAGTACTCTTAGT
CGTAGTACAAGATATCCAAGAGTCAAAGCTGGCTTGCTNNNNNNAACCCCACAACCCCCT
TTGTTGATACATACGCATGAGTAGCTAGATCTAATTTAAAGACTTGCTGAGTACTTTCGT
ACTCANGTTTGCTTAATAAGTGTTGCAGAGGTAACCCATGACCCTGCTGGTGGGTTTTAT
CTAGATGTCGATGAAGCTAAGTAGCTACTATCCCAGGTGTAGTCCGGCACCCTTGGGAAG
GGTTGTAGATAGTCAAGCTGTGCGCCCTTTTATGTTTTCACCTGTCTGTACTCAAACAAC
TTTTCGCTTCCGTTTGATTTGTAAAACTTGTTTGTATGACTTGTGTGCCGAGTCATGAGA
CCCCTAAATGTATGAACATATTATGCAAGGCTCTTCTGAGCCTTCTAAATAAATATTGTG
ATGTTGTATGGTTATGTNNNNNNNCCATTGTTGTATCTATGCATATCAGGAATGTTATGC
GTATGTATGACGTGCAAGGGTATGTATGGGATTCGACATCTAGTTGTGTGCCTTTAGTAG
TACTCTTTATAGGGAAATNNNNNNNTGTGCTTCCACTGAGCCTTGGTAGTTTGCTACTGC
TTCGGACACATTGATTGACCGACATGTATCCTTATTTGCTGCTGTGTCTGTCCACTCGAG
GAAATGTCACACTGTGTAATGGAGTCCATGTAGCCTGCTATGACTCGTCTACACATAGTT
GATGCCAGTAATGTCTCACGGTGTAATGGTTCCCTGTAGCTTGCTATGAATCGTCTACAC
GCAGTTGTTGACCGACACCTGCATTGCTCGGTTACATATGATTGTCCCTATACGGATGTG
CCACTTGGGTTTATAAATAGTCATTTTGACCCGGGTTCTCTATCATTTGAATGCTAGCGA
CATGTTCACATACGTGAGTCAAAACACGCAAACGGTCACGACCAAGGTAAGGTGGCAGCC
ATGGGGATAAGCGTGTGTGAGGCTGCAAAGTGATGTGATATGTTA
