Contig Data
morexGenes
Links



Map Locations of contig_159469 (3582 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159469

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21381 1 1653 bp MLOC_21381.1 Available Available LOC_Os04g45020.1, FRAME:-2, EVALUE:4e-50, 13104.m04507 protein MYB family transcription factor, putative, expressed





CDS Structure of MLOC_21381






Contig Sequence (3582 bp)

>contig_159469 3582 assembly3_WGSMorex_rbca.fasta
TCTGAGACCACCTGCGCCAGAGAAAAAATCTCTCCATGTCAGACAAGCAAACCGTCAAGT
AATTTGGAACTAATCATCCCCAGGTTTTTTTTTTCTTGTTTTTTTGTTTAATCTCGGGGT
ATTGCGATTGTACAGTCGCTCCAATAAATAAAACCTATGATTGTTGCAGACTTGTAGCTG
CTCCTACAAGTCTTCTCCCATCAGAATGTCAATGTCAAAGCATCTGTTACACTATCATTG
GTCTCAACAGTTGACTGTACTTACAGCCGTGTTCAGAAATGATTGTACACACAACATCTC
CATTATCAAGATTAAGCACGGTGCTGTACTACTAGCTATGATATCGGACATGCGAAACGA
AATGGAAACGAGAAAGCCCAGCTTGCTTGCACCGACAGGCAACTGCAAAAAAGACCCTTT
AGACACAACACAAGCCTAGCGTAGCGATCCTCACTTGTTCTTTCGTCCCTTTTTGTCCCA
AAAAAGAGGTTAGCCGTGACCAAGCCGGCTTTCCATCTACGCAGTAGGTTAGCGAAAGCG
AGGCGCTTGCTCACTGTCACCGAACGAGCACTCGAGAAGAGAAGCGATCGAGTGCCTCGA
TGTGGAACGCAGGTGTCAGCATCAACTCAGCCACGTAAAGCGGTCTCCATGTTTTTCCCC
TTGGCAGACATCAGCATTTCCCCTTGTTTGAGCCACCAAATCAAAAACGTTTTTGTTTCA
CTTTCTGCCCTGAAACCCAACTGGCCGGCTTAACGACACTACCGTGCTGACACTAGCAAA
TTGGCATCGGGCTGCAGTAGGCAGCAATATGTGGCATGCGCGAGACTACGGGTATACTTT
TCTCTTCCTCTTGTTGAACTGATAAGGATGATTGTTGATTAATTGGGAATTTCTGATTGA
TTCGATTCAATCGCGGCTGGTAATCAGTTGGCGTCTTGCTCCGAAGAAGATGAAGGTGGA
AGAGGTGAGAATTGGGGTGTGTGCTTGGGATGCTTACTTGTTGCCGAGGGCGGCGTGGAG
GCCCATGACGGTCTCTTCTTCCTCCCGGGAGAACATGCCGTGCTTCAGCCCCGGCCTCAG
GTAGTTGATCCATCGCAGCCTGCAGCTCTTGCCGTTCCGCTGAAGCCCTGCAAATTCATT
CACGGCAAACCTTTAGTCCCCACCCCACTTGCCAAGGTACATTTGACAAAATTCTGCTGG
ATTCTTTTCCGAAAGCACCGCAAAAATTTGCTAAATTCCACTGGCGGCATTAACCCCCCA
CCTCCCCCCTTCCCACGAGCCAAGGTACATTGCAGAACCTCAACAGGAAAGCAGGGGAAA
TTGGGCATGAACCTCGCAGGCTCGCCGCAATGCGAGCTCGCAAGAAAATCCGTGCAATTC
CCCTTGGAAATTCCCGGGGGAATCGCGCGCGAAATGCTGCGCGCGCTTGGTTGGGAGCGG
GAGGGAGTTCTTGATCTTACCGGCCTTGACGGGGACGGTGCTCCAGCAGCTGTGGCCGTG
GCGGACGATGAAATCGCGGAGCTTCTGGTCCTCCTCCGGCGACCACAGCCCCTTGCGGTG
CTGCGCCTTGGGCTTCTGGCACGACTTGCACCCCATCAGTTCCCACGAAATGCCGGAGGT
GCAGGAGGACGGGCCGGCGATGCTGTGCACTCCAAGCAGGAACGGCGAAGGGGGGTTATG
ATTTGATAAATAAATCAGCTTTGAGAGGCGTGGGAGGGGCTGCGGTTTGCTGTGCTGTGA
TGTGTGCACTGTTGTGTCGGTCTCTGCGCTTTGGCGTGAGGGCCTCCGCACGACTTTATA
GACCCAAATGATGAAGCTGTTGGGGCGCCTTATCGTGGGGATAGAGAAAGATTAGTCACC
GGTTGTTTTTAGTGATCGCAAACGCTTTGAGATAGCATATCCATTGATTTATGTTGTGCA
ATGCTCGCTTATTTAGTAAAGCTTCTTTATCAGTAGCATATAATAATCATAATAATACGA
AAGGCCTGGAATTGTAGAAAGAAAAATCCGTCTTGGAGACACCCAACTATAAGTCCTGCA
AAATGTGTACTCCCTTGGTTTTTTATTTTGTTCGCATATTAGCTTTGTCTCCGGTCAGAT
TATTTAAATTTTGATCAAGTTTAGATAAAAAAATTATTAATGTCCACAATACCAATTAAA
TACCATTGAAATCGCCACTTAATATATTTTTATACCATATATACATATTATTGTGAAAGT
TTAGATTATTTTTGATAAGTTTGGTCAAATTTATAAAGATTGACTCATGTCACAGCTAAT
ATGGAGAGTGAATTAAAACGGAGGGAGTACTTTAACAACTACCATCCTAACCATGATTTT
AGTTGATGTTTATTTAAAAGATATCTACCATCCATAGTTGATGTTTATTTAAAAGATATC
TAGCATTTTAATCTTTGAATCCAATGTGTTCATTTTATTGTCGGTACCATCTTTTGGAAT
AATCCAAGAGAAATAAGAATCAAAATATATTAAAATTCTTTGCGATACCCAATTGTAGAG
CTTCCCTACTACTCCCATAATCTATAAGAAGGAGGTCCCTCATAAATTTAATCACATGAT
AGTTTAGTACTACAAGATGGCTTGGGCCAAGACCATAATGATCATAATGCAAAAGCTACC
ATCCTATGGAGATCATTTAAAGAAAGACTTGGCACTACTAAGGTCACTAGCTCACCCTTC
TTTCTTGTTGGTACGCTAAATACATCTATTAATCTTGGAGATCTAGAGGTTCCTTCTTTC
ACATAAGAGATTAATGATGTCATAAAAAATCCCTTCGTACAAGGGTCCTCGACCATATGG
CTTTAATTATGCTTTTATTAAGCCATGTTGGGATATTATTGTCAAGTATATTTGTGAGCT
TATTGAGGAATTCTATCATGGAATGATTAACTTGTAGTTCATTAGTGCATCTTTTATCAT
CCAAAGGAAGACAATCCTCAAACCTCAAGTGACTTTAGGTCAATTTCCTTACTTAACTGC
ACCATAAAAAAAGCTAACAAAGCTGCTTGCAAACAATCTGCATAAAGTAATTCTCAAACT
ACCGCATATAAATCAATTCATATGTTTTTAAAGCAGAGCCATCCAAGAATGTCTTGCTTG
GGCTTTTCATTTCTTGTTAGGGCCTACAAAAACAATTGTCTTAAAGATGGATTTGGATCT
TAAAGTGAGGAAATAAAAATGGGGGAGNNNNNATGAGCCCACCATAATAATAAAAAAATG
ATAAAAAAAGAATGAGAGAAAAAGAGANAAGGGACTTTGCTACTATCCTTTAACATACTT
GTGCCTCAAAGTGGCATCTTGTTCTTCATATAGATAATCTCATGTTATATTATTCATATG
CTAGTGGGAATCAATTTTTCATAAAATTGTCTTGTATATTACGATGACGGGCTTCCTAAA
ATGCATGTGGTCTTCATGAGCATGAAAGTTGGATGCACACCCCACTTAGCCCCAGTGGAG
CTTTCATACACTTATAACTCTTGTGCATCATTTGCATGACAATCCCTACTCCTTGCATCT
GTCACGCCCAAGATGCGACCCTACCCTCAATTTGTCACGAGG