Contig Data
morexGenes
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Map Locations of contig_159439 (2790 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159439

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21341 4 1999 bp MLOC_21341.1 Available Available LOC_Os01g28540.2, FRAME:-3, EVALUE:7e-69, 13101.m02960 protein stress regulated protein, putative, expressed
MLOC_21340 1 1220 bp MLOC_21340.1 Available Available None





CDS Structure of MLOC_21341






CDS Structure of MLOC_21340






Contig Sequence (2790 bp)

>contig_159439 2790 assembly3_WGSMorex_rbca.fasta
ACCCAAAAAGAAAAGCGGGCGGACGCGGAGCGGGCGGCCGACCCAAACGGGCAAAAAGCG
GACAAAGCGCGCGTCCGTTTGGGTCGCCCCGTTGGAATTTCTCTAATACCTTTGATTTTG
TACATATCTATTCACTGAAAAAGCAGTAGTTCATAGGTAGGCAATAATTGCACCCATCCC
AGAATATGCTAATTATGTGTTAAAATGGCAGTCACTTTTGGTCGAAGTAAACCAAGTAGA
GAGCTTTGGAATGGGGATTACTATGTGTTTTTACATCAATAAATCTTCTCCATATTTTAA
ATGATCCAACAATATTTTGTTCATCTTTAAATTTTAACTTCGCTGAAAGCATATAATCAG
TGTTCATTGTGGCAGCTCTGAGTTCTGATGCCGATATACACTTGGAAGTAGACATTTATT
TTTTGCCAGGATTTGGAAGTAGACCTTGAAGAACAACGAACAACATCTTACATCATTTTT
ACGTGCTTTGCAAACAATAATAATTTAGAGACTCACCTTTGCAGACAGTTTGCCTGTATT
GATCTGAAAATGAAAATAGCCATTAGACTGGTACATATATAACTCCTTTGTAGGAGAAGA
TATAGAAAATATCGACAAATGTAAAGCAGAGCTGCAGCTGTTCCATACTGGCTTTCTGTA
GCAGACGATGGTTTTTCATATCAGCAAAATAGTTGGTGGTTAACAATAAACATTTCATCT
ACAATGCTCATCCATTTGCCCATGTTCAGTCGAATTGTATGTATCATAAAATTGCAAAAG
AAGAGCATCTCGCTCTATACTGAAATATAAAACATTATGTTTTTGTATTACAAAAAGAAT
GGAGAAAGATATAAGATTTGGGGACTGCAGATTATTATGAATAATTGATCTCTGCTTTCC
ACCCTTCACCAATCTGACTACTGCTTAAAGAGCAAATAGTGTTAACAGATTCTTTTATTG
CACAAAATTAGATTTGACTAATTAGTAGCAACGGAGGAGTTTTACTGCATGAAAGTATTT
GGTCAGAGTGACAGTAACACTGGGGCCATAGAGTATTGCATGAATGTAAAATTAATTGCT
AAATTCAATAGTTCAAAGGTATGCCATGCACACTTAACACTGACAGGGAGAATAAGTGTA
TCTAGTAGAATAAAGGAGCAAACAATGCTAGGTATTGTGTGTCAATTAAGAATAATAGCA
CTTCAAAAATTATCCCAATATTAAGAATTGACTTAGAAAGCTGACCTCTTCAACGAACTC
AAAGTCCACAAAAGCTGTCCCAGCTTGCACGTTCAGTGATCCTTGTTTCGTAAGTGTATC
TAAACATGTGATAGTATATTCCTTCGGAAGCACTCCAAGCAAGTATGCTATCAAGAAGTG
ACCAGCTTCATGCTTCACATATTCCAAACATAGGATATTAATTGTTTAGATTATGTATAT
GATAAACCACACTTGAAAAAGTATACAAACAGTTTGCTCGTATTCAAGAATGGAGTTTGT
TCAAGAATGGAATATTATTGAAATTTTGTTCAAGAATGGAATATTGTTGAAATTGAGCTT
TGCATACCTCAATAACTCTGTTGTGGTACTTCTCGCTGAGACTGTGAGCAATTGTGTCGA
GAACCAAGTTTCTCGCCCCTCCATTGTAATATATCTAGAAAGCTGTAGCCATATAAGTTC
AAGCAACAGATTGGCTGACTCAAGTGATTATACCATTTCTATGGGGAAATTTATACGGAC
TAATGTTCTGCATTACTTTGTATGGAATTTTGTCCTGGTGATCCTAAGAATCAGTTAAAT
GGCTACAAGTAGTATAAACTTAGCTGAATCAACCACACTTCCTTACTAGGAAGCTATAAC
GTTGGATGTGTATGCATGCAAACTCATATGACTGTCTAGTTCGAAATTGAACAAAACTCA
AGCTAATTGGCACCAAAGAAGCACAAAACAGATGAATACATCAGTACTGCAGAGAATATC
TATTCACTGCCTTAGATCATTGAGTTCTCCTCTAAGAGATGGATATACGAAAAATAAAGA
TTGTTGTTAAAAACTGCAACAAGGTAGCCGCAAAGCACACATGGCCCAAGCATATGCTTT
GAAATAACAACACCACGCGAACAATAACAGTTCAACGGCCAGTCAGCAACAAGATATGTA
ACAGATGATACACAAGGCCAAGTAGTCAAGTAAATAGTCAGCAACAAGATATGTAACAGA
TGATCTACAAGGCCGATTAATCAAGTAAATTGTAACTCACCAAATCAACAGACCACACGA
ACAGTAGGCCTACAAAGATAAGCAGTGCTTGGAGTTGAGAAAGCTCAAATGCAACTGAAA
CAGAAAGCCCTCCAAGAAGCGCGGCAATTTGGAGATTTCTCTCAATTGATCCCAAAGTCT
GATCCACAGGAGATAGGAAAGAAGAAGTATCGATCCCATTTAGCTTAAGCTCATCTAGTT
TATAAAGCCTTTGAGGTACCTAACAGAGATTTTGGTAAAAAAACAGCAGAGTAAGTATGC
TACATAACATTCTCAAAAAAGGATAAAGGTAAAGCTTCACTTTCTTCCTTATCGAACATG
TAACACATTCTAGCAGGTGGAAATGACGCAGCACAAAGAAGCAAAGTTGAAGCGTTTGCT
TGTCAAATATGTGAACTGGCATTAAAGATCAACAATTGTTTTCGCATGTAATTGGTTTGA
ATATAACCTTCAACAAAGAAATACTTGCAGTTGCCTACCATGCAACTGTGGAGAATATTT
TGAGCATTAGTTTGGATAAATGATAGCATG