Contig Data
morexGenes
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Map Locations of contig_159425 (4412 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_159425

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21317 1 1527 bp AK360150 Available Available None
MLOC_21316 1 2079 bp MLOC_21316.1 Available Available None





CDS Structure of MLOC_21317






CDS Structure of MLOC_21316






Contig Sequence (4412 bp)

>contig_159425 4412 assembly3_WGSMorex_rbca.fasta
GACACTTCTCCAGGCTGTCTCCCAAGAGTAGGGGAANNNNNNTCTCCAGAAGCATCTCAG
GTACGGTGACCATCTACAAGGTTTTTAGGAGGGTTAGAATTTCTGGGGGTGGTATGAAAT
GGTAGTAGGGTGTCGAAAATCTCAAGTGTAAGGGTTGAGCGTACTACTCGTCTCGGTTAT
CGTCCATGCTACCTAAGGCTTCCTACAGTTAGGATCGCTCTAATACCAGCTCTATGAGGA
CCCCGACCTACTAGTCGAGCTCGCCGAATGAATGTGCTGAGTGATCCGAGAGATCAATGC
TCACCGAACACACATATATTGAATATAAAGAGTCTTACATCCAACATATCGATTATTACA
ACAAATGACCGTCAAGGTCAAGTTCACATAGGTAGGNNNNATAAGGCCAATCACACCGAT
ACATCTACTAGCGGAAATCTTGGGGCTAAACGGGAGCCCAGCCATCAGCCTAGACCAACA
GACAGAATAGGTTATGCTTAAACTGGGCATTGAGGTGAAACTGGGCATCGCCACCAAATA
TAGTATGAGAAGCATGCTAGAATTTTCTGGGAATTTATTGGAAATTCCAAAAAGTCAAAA
CAGACAAAATAGGTTTTCAAGGATTTGTTCAAATATTTTGAACATAATAGGGGTTGAAAA
TCTTATGTANNNNAAATATATGTCCTCTAAGTATCTTCAAATTTTCTCAGATTTTTCTAA
GACAGAAAAGTAGTTTTTCATACAGAAATATCATTTCTGNNNNNNNNNNNNNNNNNNNAA
ATAAAATAGGAAAATACTTTATAAAATAATTATTTTGTGATATTGGAGCGTTAAAATAGT
TCTAAAACTAGATTACCATCCTTGGGTGAAGGCACTCCCTTGACATTAGGGACTTGTAGT
GCAAACTCAAAGCAAGGTTTTGAAATAGTCAAAAATGAGAAAAAGGTTTTTATGAAAGTG
TCATGTTATAATAAGCTATTTTTGGATCCACTCATTCAAACATACACACAAACAATGACA
ATCAGGGCACTCATGGCACTTGCTTAAAAAGTTTTAATAAACTCAGATTTTAAAAAGGCT
ACACTTGAAGTGAGGTAAAAACAGGGTGTGACAGAGGAAGAGAGAGTAGCGGGGGGTGGG
GGGAAGCTCCGACCTCTGGCGAGGTGGTTGTCGCCAGCGATGACAGTCTGGCGGCTCGCC
GGAGTGGCACGGGCGACGGGGCCGGGTGGAGATGGGGCCACTGGCGGGGCAGAGGAGCTC
GCTCTCCCGATCCAGATCGGGAGCGAGCGATGACGACACGACTCGTGCCCGAGAAGTACC
GAATCTGGGCCTCGCGGGCCCATGCGGCTCGTGGGAGGCGCTGGGGCAACGGGGAGGCCA
CATGGCGGCGGTGGAATTGCCGCATGCGACAGCGGGGCTCGGCAAGGCTCGCCAAGTGGT
GGGCAGGGGCTCACGGAGCCGGATTTGGATGGGATTGTGGCGGCTAGTATGGTGTGGGAG
AGGGTGGTATCCAAAAATGGCATGTGGGAGAGGGTGGTATCCAAAAATGGCATGTGGAGG
TGGTTTAAATATGCAGGGAGGCTAGGGTTTGAGGGTTCTTAGCCCGATTTAGACCTCGCG
ATTGCGATCGGACGACTGCGGAAGTGACGACTGCGGAAGTGGAGGTTGGCTAGGTGGAAT
GTTTAGAGGGGTTGGGCTGAGAAGAGAGGGAAGAGAGGCCCGTGACAAAGTTTTAAAATC
CGAAAACGTCCCATGGATTACCAGCTAGTACCGCCATATGTTTAACGGTTCACGTATCAA
ACGGACTTTGATTGCAACGAAATTTGACAGACGGCCTATCTAGACTATATTAAAACCGTA
TGGCAACTTTCAATCCAATTCAAGAAAGTTTTATACACATTTTTAAAAACAAAATATTAA
TGATGCCGCGGACATGTGTGATTGGTCTCGAAACGGTCAACAATAAAAACAGAGAGAACC
GGCAACTAACAAGAGATGCAAGTTTTTGAAAAATGATGCAACCAAGTATAAATGCAATAT
GGATGATGCGCGTGATGCAACGATGAGTGCGACAACCAGATAAATCACACGACAACAATA
AAATAAAAGAAGAATCTTCTAGAACATCAGTTTCGGGCTGTTATAGCAACACTACACATT
TTTTTGCTTACTCAGTCTGATTGCTTTCCACTTCTCTGTAGAGACACTGGACTGCGCCCG
CGGAGTGGAGCTGGAGCATTCACCGTGTCACTCGGTGGTTCCTCCACAGCTAGGATGTGG
TTCCCTTCTTAAATGTTGCGGTAGGGTAGCTCGTTGTACTCAGCAATGATCTGGTGGGAC
TGCAGCATTCCATTTCCAAGGTTGACCAATCTACACAAAAGCATGGTCATATGCCACATA
AGATACACCATATATCATTCAGAATTATAGCATAGAGTAAGATCCACCAAATATATTTGC
AATTCAGAGAAGTATTTGGAATTCCATTCAAAATATTACAGCGCTGGTTTTGACGGTTCA
TTTACTAAACTTGACAACATTATGTGGTATTCAGTTCAGTGAGATGTTGTGCCACATAGA
TCCTATGAGATCCAGGTATCGGTAGACCGATTAGTACATCATATTCAGAAGTACTGATTA
GCACTAGGACAGCTGCACCAGCGAAGCTAAAAGTGCACGTGCAGTCAGATCTGGCAGCCA
CCAACAGAGCCCTAATAGCATGAGGTGTGCCATCAGTGTTCAGTACTAGGTTTCGACAAA
AACTTGTTTAAACATTTGATTACTTGACCAGATTTCTTGAGCAGGAATGAAGTTGCACAC
TAGGACAAATCTAGTCAATTGGAGTACATAACAGTTCTCTGCTGGCCACCGGCAGGAGAT
TTACATACTGGCATAAGCTTATCATAAATAAATAAAAGTTAGTGACACTGCAAGGGAAAC
AAGGTTTGGACCTGGTGAAGACTGCAACAAGCTCATTTGAGTGCGCGAAGAGGGAGTCAC
CGATGTGCTCCCTGATGCTGTGGAGGCGGCTGAGGACGCGGTTGCCGGCGGCTTCCCCAA
CACTCAAGCTGTCCTCCAGAACAAGATTATCAGCTACGTGTTCTTCAGTTCAGTTTGAAC
TCCCTCAAAATTACTCTATGAACTTCCATAGTATCTTTCTATGAAAAAACATCACACGTA
GTGGAATTGCAACCCAACTTTCATATTTTGTACATTTGTAGTCTACACAAAGAAACCATC
TTCATCTGTAACGCATACTCCCTCAGTTCTAAAATAAGTGGCTCAAAAATGACCCAAACC
CAACTTTGACCCAACTTTGCACTACAAAGTTAGGTCACTTTTGAGTCACTTATTTTGAGA
CAGAGAGAGAGAGTACTACTCTGCAAGACAAGTTAGATACTCCAATGAGGCATAAATACA
AACATGTGCACTGCACCATAGGCAACATACAGGATTGGCAGGCAGTAGTCACCGGCCAGA
CATTTTTTGGGAATCACACGAGCAAGCACACACAGCCGAACACACATGAGCACACACGCA
TCAAACTGAAGCCCTTATACATCTAACTCAAGTTGTTCAAAAAATGGAAACATCAAACTG
AATTTGTTGGCCAGGCTAAACTTCTCTCCCTCGACCTTGGTCGGGTTGGCAGCAGGCGTG
CGCGAGGCCAGAGGGAAGGCCGCAGCGATAGGGGAGGTGGCTAGACTCGCGCGCATGGGG
TGCCGACGGTGTGCTGGTGGTAGAGGTGATCGGGGTGCGAGCGGTGTTGGCTCCGGTGGT
CGGTGGCGTCACCGAATCCAAGCACGTCGGCGATGGAGGAGCACCACCGGGAGGAGGCGG
AGTTGGCAGGACCAGCGGCGACGCTCTCGGTTGGGGTGGGGATCTGATGGTGCCGGTTAC
GGCGGAGAGCGGGCGGCGCAGGAGCGGCGACACCGGTTAAGGGAGATGCGGGCGGCGCGT
GGGCGGCATCGGCTGTTGGGACGGGGTGCAGGCGGCATGGTGGCAACAACACTGGTTGGG
ATGGGATGTGGGCGGTGCGGGCCCGGCGGCGCCAGTTCGGACGAGGTGCGGTGGTCGTGA
GGGCGGTGCCGCCGGTTAGGGGCGGCAGATCGATCCGAGGCGGGTTGTGCGAATCGGTCG
TGGGAGGTGGGGTCGAGCACGAGGTGTGGACACCGAGAGGATCGGGATAGTTTTAGGCCC
CGGCCTTTTTCTAACGGATTCGGAAACCAAAAATGCTACGGGAACATCTTACAGTTTTAC
GGATTGGTCTTTCTCCTCACTAAAGAGCATCTCTAGTAGAACCCTCAAACCCTTAAAACA
AAAACCAGTTTTAAGGATTGAGAATTGCACATTTTTGACTCTTTTAAGGGTTGAAAAACA
GGGGCAAAGACTAGAATCCTCAAACCCAACCC