morexGenes - Barley RNA-seq Database

Contig contig_1594152

Source Contig contig_1594152

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_1594152 (1309 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_1594152

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21303	1	925 bp	MLOC_21303.1	Available	Available	None

CDS Structure of MLOC_21303

Contig Sequence (1309 bp)

>contig_1594152 1309 assembly3_WGSMorex_rbca.fasta
GGGGCTGTAGGGGAAGAAACCTATATATTGAGGGCAGGAAATATTTTTTGCCGTCCTAAG
CGGTATTAAGGGGTGTAACCCTTTCAGGTTTTTTGTCAACTAGGTTAAAGCCCGAACAAA
AGGTTTTGGGGTTCGATTGCAGTTGTCATTATATTGTTTCCTTTGTCTGGTCAATATGGT
AGCCTCTTCATATTGTTGGCTCAAGATATGCATGTAGGACGAAATGAGACATGATTTGGT
CGTTTTTATGTTGGCACTCTAATGCGGGCATGATTAATGGAGTCATGGTGATGTGGCTAA
CAATTAACATCCTTGTGTAAACTCGTACCTACCATGTCTTTAAAATGAACCCCTTTTGTA
CTTCCTCGCCATAGGGTAGCCAACTCACACACCTTGTATGCTAGCGTAAGCTTGAAAAAC
ATATATTATTTCTTCCAATCTTCATGGTGTGCCGGTAAGAAATTAAACAGTAGTTGAAAC
AGCTCGATGGAATATCAAATGGAATTTGTTTCATTGGACTAGGAGGCTCGAGGAAGTTGA
CGCGATCGCCTTTTGGCACAAAATGTCCACAGTGAATAGCTGATTTAGTTTAAGATGTGG
AGATCATTGAACGGGTCATAGAGATTTGCTCAAACCTGCTGAACCTGTCGAGCCGTTCTC
CCTGTCCAAACTTTTTCCTCCAACGAGTTATCTTTACAAAAATCGTTAAGAAAGTTAGAG
GAAGTGCAGCTTGCTCTTCAAACCGCCATGAGTGTACTTAGAGCTGGATGTGCAGGCCGA
TCGCGAGTGCTGGTTTTTCTTTTTCTTTTTCCTTACCTAGCTGTGTAACTCTCTTACTTC
TCCTTTCTCATGAATGAACTACAACACGCCTTGCTGTCTTTTAGTCAAAACAAAGTTAGA
GGAAGTGTTGTTGTTCTAGTAAGCTATATAAAACTTATAGTGAAATTTCTTCAGCTTATA
AAATAAAAATAACTATGTCCAATCAGTGTGAAGTTCTAACAGGTGCAAAATCAGATCACC
AGTGACATGGATCGAACTAAGATGACTAGGTAAAAGTATGAAGCAGCATTGCGGGCAACG
GATAATCGGACCAAAGAGCTCCACTATGGTAACCCGTATAAATGGCAATCCGAACCATTG
GCATATCATACCCACTTTCGACTTTCGTATGTACGATGGGTCACCGCCAGAATGTATATG
TAGTACATATTTCTCTAGGATGAGGATGGGTAACATCAGCACCAAATATAATGGTTGGTC
TGTCTCTAACAAGGGGAATTCTCCTTGACAAAGCATCGACGAGTACAGT