morexGenes - Barley RNA-seq Database

Contig contig_159406
Source Contig contig_159406
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_159406 (7573 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_159406

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_21293	3	4101 bp	AK363387	Available	Available	None
CDS Structure of MLOC_21293

Contig Sequence (7573 bp)

>contig_159406 7573 assembly3_WGSMorex_rbca.fasta
TAATATAAAAACGATATAAGGACCGTAGACGCAGCCAGAACCACTTTTCCACTCAGTTTC
TCCGCGGTCGTGTTGGGGACAGACGGTACGTCGCAGGTGCATGAACACGACGATTCCGAA
ACGGGTGGTCATCAGCAGCAGCAGCAGCAGCACGCACGACTGCCCAAAAAACGGTGGTGG
ATCAACACGTGCTATACCATCCACATGCTCTGCACTTGATCATGCCCGTGCTGCTGCGGT
AGGACATGGAAGGAAGTACAGTCCAGCATCATCAGCTTGGAAATGAAAATATCATCTCAC
TTGGCGGCCTTGGCCTCAGGTTAGTGCTGCCACCACTAGTTAGTATCTAACGGATATTCT
GAATCTTGTGTCAAATTTTTCTCAATTTTAGCAAAACCTGTCACCTAATTTCAGGCATAC
TACAGTACATCGCAGAGCCTTGACATTATCTATTCACAGGTCTGTCTACATGTTTGCACA
AGAACAACAACCTGAAAACGTGACTGTAACTGCAAGTTATGCATCCCCTCCTATAGAGAG
AACTAGAAAACTATCTTGCCAACTCTCAAGTCTCAACAGTTTGGAAGACAAAATTTTCAA
CTTCCGATGATACCTCCTCATACCCTGCGGTGACTCTTTCAACAAGAGTAGCGTTCGTTA
CAAAATCTCAGCAAAAACACATCATCTATGTAGCGTAAAACCACTAAAAAGGAGAGAGTT
ATATACACAAAACGACATGCCAACTTCAGGAACAAGAATAAATCAGGCAGCAGCAGCAGG
AGCAGCAGATTATGTGTGCGTCTCACCAACCAATCCAACTATAAATGAATGTCTCACTCA
CTCAAAGTCTCTTCCTCCCTCTTCACGCGCTCCCCTTCTCCTCTGTCTCTCTATTGTACA
TGTTGGTTATAAAAATGCTTTTACACCATTCATACAGATCAAAATTGTGCAGCGGCAGCA
AGGATAGCTAGCTCATCATGACCCCGCTGTCGCGGGATGGGCGATCATGTCATGTCACGG
CGACGACCAACGGACACCAATGCCTTCTCTCCTCTTCTTCTTCTCCGGGCAGCACAGCAC
TCGTCGGGATCGATACTCCACACCTGCCAGCCATGCCAGCTCTCTCACAAGTGCTGAGTT
GTCACGCACCGGTCTACAGCTACCCCCACCCAAGAACGGGTGAATCACCCATTCCTGCCA
CCGAGCTACACAAGCTGTAGCAGAGCAGTGCTACAAAGTAGAAACTAGTTGCAAACTTGA
TGTGCTGAGTGCTCAGTTACTTCACTGGATCTTTTAGTTCATGAAGCATCGTATCAGAAA
GGAATGACATATGGCAGAGCGATGACGTCGGCCGGGTCGATTTTCATTGCCTCAGCCCAC
ACTTGGGGCACTTCATCGGCCTCAGTCACCTTCTTGCCCTTCTCTGGCTTGGTGCTGCTA
CAATGATCAAACAGCCAGTCTTGATCGCCATAATCACATTCCATGATCTGAGGTGCTTCA
GGGATGCTGTATATCTGTCCCAGATACTTGAAATCCGGGTGAGGCGACTTCCTAGCAGGT
GCGCCGTTCCCAGATGACGCCCCAGGATCCCGATGCCCTGGAACGACCGCAGGTCGCTGC
TGAGCCTCCTTGCTGACATTCACCTTCTCTTCCTTCTTAGGGAGAGGATCTCGAAGCCCT
GGAACGACCGAAGGTCGCTGCTGAGCTTCCTTGTTGACATTGACCTTGTCTTCCTTCTTA
GGAAGAGGATCTCGAAGCCCTGTATCGACCAAAGGTCGCTGCTGAGCTTCCTTGCTGCCA
TTGACCTTCTCTTCCTTCTTATTAGGGAGAGGATCTCGAAGCCCTGAATCAAGTGAAGGT
CGCTGCTGAGCTTCCTTGTTGCCATTGACCTTCTCTTCCTTCTTAGGGAGCCGTTCAGCC
TTTTCGATTTTCATGGCATCTGGCTTCATGGAAGAGGGTGGCGCGGCTACATGAGATGCT
GTACCATTCTCCACATGATTGCTGGAGGGGGCTGGTCTCGGCAACTTTGTAGGCCGCATT
TCATGATGGTCTGTACAGAGAGCATCAGAAGTCTTATAACATAAAGCACCATAAAAAGGT
ATAATGGTGTTCTACAAGACTGCAGTACTGGTAAGTGCAAAATGACAAAAAGCAAAGCTA
GGAACTCACTTTGTAGGTAACCATTCATCTCGTGGTTCTTTCGCTTCTTCAGGTTTTCAT
CAGCTAGGATAACTTTTGCATCATCAGCTGGAGGAGCTAAGGGAGGGGTTAAGGGCTTCG
TGTCAAGGCTATCTATCAGACTGTCTATCTGATAATCTATACTGTTTTCTCTTAACTTAT
CATGCTCTTTGTGATTATGTTCCTGTTTCTCCTTCTTTGCCTCCTTTTCCTTTTTCTTCT
CTTTGTGTTTCTCTTTCCTCTTCTTTTTCTCATGCCGTTCACGTTTTTTGTCCTCTTTCT
TTGTATCATCAGATGCCCCATCTCTAACCTTTTCCACCCTTTCAGCTCTTCCAACTGCAA
TTTTCTCCACAGCTGGGGGTTTAGAATCAACCTGTTTCTGATCAGTTGAAACACAAGGAT
GCAGCATTCTTCCACCTGGTTCCTTTTCCTTGCCCACAGCTGGGGGCTTGACACCAACCA
GTTTCTGATCAGCTGAAACAGTATTCTGCAGCATTCTTCCGCCTGGTCCCTTTTCCTTGC
CCATGGCAGGTGAAACACCTCCAGCATTGGGCTTACTAGCAGAAATTGAAAAGTTCTCAG
TTGGCCGAACCATCCCATTTGGCCTTCGGATTGTAATGCTTGGGCTTGGGATAGTTGACC
TAGGTAGACTTCTATCCATCCCTGTTGAAGCGCCAGATGTTGATGGACTTTCAAACCTCT
GCATGGATGTTGGTGCGCTATCCACCGGACGACCAACCTTACCATTTCCCTTGTGCAGAG
CATTAGCAGGGCTTCTGAGCAATGGAGAGCTGGTGCCAATTTCTTTCCTTGCAGTCTCTT
TATTTGGGCTCTCAGTTCTTTTCTGCACCAGTATGCTAATGTTACTGATACGCTGCCCCA
TTCCCTCTTTCCTTGGCACAGAATCAGTAGAGTTGGAGAGAGGCCTAGTGACTTTGACTC
TTTCCTTCTCAGCCATAGGTGTTGTACTGAAGCCATCAGAGCCTCCTTGAGACGAACTGT
TGAGGTTCTCACTGCGTCGAATCGATGTGCCATTTTTCTGTTGATTGATAGTGATGGTCT
GTTGCCCCAAGCCCTCACTTCTCCTTGAAGCATCAATAGAGTGAATACGCATTTTGTTAA
CTGCAGTCCTGTCATTCTCCAGTGCAGGTGCAGCACTAAAACCTTCACGACTTCGTTCAT
TTGAAATAGTGAAGTTGTTAACAGCTCGATTCTCCACCCCTTTCTGATCTTGTGTCTTTC
TAACCAGTTCCTCCCTGGATATAGGATCCTTAATTTCTTCAGATTTTCTGCTGCTCTCTC
CAAACTTCTGACCAATGAGAGCCTCACCATGTCTGTCAGTCCCTTCAGATTCCCTGCTTT
TATCTTTGCTCTTGTCCTTTTTCTTGTCTTTGTGCTTCTCTTTTCGATCTTTTTTATCTC
TGTGCTTATCTTTACTCCTTTCTTTATCCTTCTTTTCTTTTTTATCTTTGTCCTTCTTGT
CCTTCTTATGCTTCTTCTCTTTGTGTTTCTCCTGAAAAAAGATGGTTGATGCGAAGTCAA
TAAATTTTAAAAGAAGAGATCGACGCTAAGCATAAACACGTCGAATTAATATATTTCAAA
CAACAGTCCAAAAAAACGCTAAGAGAAAAAGAAACTAAGTTTGTTGATCTACCGGAATGC
TCATGTCAATATAAACATCTACGACGCATCACTATTATGGGAAGCTACCATTAGTACAAA
AAATTACAAGCTACAATGACCATTGAATCACACTAACTAAATGGCATACAGTATTCCAAA
TTTCTGGAGTTCGTATCTGAAATATTATTTTTAAACTTATGAACTCGCACTACATAACCA
TTGAGTAAGGCCTGGGGAAACAATCTGCTTCTCTGATTGCAGCTTATACTTTTTTTTGCT
AACAAGTCTAATGACTCGAATAATCATGTTCAGCTACAACCTGGTAATATTACTACTTTA
TGTGTGGTCGAAGCTTTTGCTTTTGACACTAACCACTTGACGAAGTTAACCAACATATTT
TATACATGGACCATCTGTTGCAAAAATAAAGTTGGCACTGAAATTTCCGCCATATTCAGT
CAAGGACCAAATAAGTCATAAATTTAGAAGGATATGTACTCTATTTAGTAAGGAAACAAA
CTAAGTCCAAATCACCCCACATTTAAACATGTGGCATGAAACAGCCATGTTATGGACCAT
AGAGAGTTTAGGTTGTAACATAAGATTGAATATAAGCCAATACTTGAACAATCATTTCAA
CATATCAGGACAGAAATAAGCTAGTTTATTGAGACGCTATGCTAAAAATCTAACATAATA
GCTCATGTAGTCAATCAAGTAAAGCAACAGTGCTGCAAGTCACTACAATGAACTTGCAAA
AATAACATAACACCTAATGTAGTCATTTTATGGCCATGTTTTATGAGGGCAGGGTTACTG
GATGAGTATCTGCCATATTTAGTGAAAGTGTGAAACTTCCTTGCTTATCATGTTTTAAAA
GAACAAACCATGAAACCCTCGAATGTCCTAAATAGAGTTAGTTAGACCAGATCTTGCAAG
AAACCATGTACTTGAATGGAGCCTCGGTAGTTTTTCCTTGATGAGCAACATGGAATTACG
AAGGATATATTAAAATAACGCAGATCGCAAGCAAAAAAAATGCCTAGCACATAAGTTCAA
TAGAGCACACAAAATAATCAGATTGATAAACAACGTTCACAGCTAAAACTAACCAAGAAC
AGCAAGTAAACGCTTGTCCCTCTGATACGTTATATAGCATTTATACCATTTATTTAGGGT
GTTTGTAAGTGACAACATCAACATATCCGTTCATGGAGTTAAAATTATTGTGCAATGTAA
GGGCTGCCTAGATAATCCTGAATTCCCCTTTCAAGCTTTTTAGTACTGGAAATTTAAAGT
TTATTAGATTGTGAGGAAAATATATTAATATCAGAAACCTAACATGAGTTCAGTTACCAA
ATCATATTTAATCCCATGATGTCAGAAGACACCTAAGGGAGGTCCAGATATGATTCTTAT
ACAAAGATGACAGAAAAATCTGCTGAAAAGTTCAGGTCACAAATTGATTACAACTGGCAG
CTTTCAAACAATGCATAATATATCTATACGATACAGCCTCTGTAGTGAATAAACTTTGGT
TATGCTACCAGTTTTTCATGTAAAGGGCACTGATATGATAGAACTAGGTGGACTTCTTCT
CTATATATTGCAATTTAAACTGCCAAGATATTTATGTTTTCTATGCTTCATTAACAAACT
TGCTTACATGTTAACACATAATTATTATTTTTCCTGGGGCCGGAAAAAATAGGAAATAAG
CAGACAGATGAATTGTGAATGTCATTTTAGTTTGATTTGACAATCTATCAATCATAGGAA
CACCAACATATATAAATTATTATATCAAGTGTAGGAATAGATATAGTTGTAGAATGGAAC
CAGAGCTGTTAAGGCAAGCTATTTGACACAGATAAATACAACTGAATGGAACAGTCCAGC
AAACTATTGGCATAATGGGAGCTTCTACAGTACATAGTCAGGTATGAAAGACCAAGCAAA
TTGTTCCTAGAAAGGCCTTAAGGCAGGGAATGAGCGTGTATCAACCTTCTTACTAGTAGC
TTGGTAAAGGCAAACATTTAGCAAGATAGAAAGACGTTAAGAAATCATCATACGAGATTA
CGAGTCATTCCAATATCCCATTCCCATCTTACTCATAAGCTTCATTCTCCAAAAATAGAG
TCTCCTTTTTGCACTTATGCTGTATTCCCAAGTTCCGAACCACAACACAATAGATACTAG
AGTTTATTCTTTATTGTAGATACTAGAGAGTATGATGATTGTTATAGGGGCACACTTGGA
AAGGACTACACTAAAACAACAAAATGTCATGTAAAATACAACAAGAAATCTACGTTAAAG
CATAGACAGTTTCCTTACAGAAGGAGTAACAAAGCAATAATAGTCTTTAGATAACAAAAA
TACTGAATTGTGGTTTCACATACACAACACCTAACTGCAATGAGATGAATATAGCTACAT
AAATGTTTACAGTACAAATCCTAATCGATCCATTCCACCGTCCACTGATCTAGAACACCT
AGTATGACACCGGCAATTAGAAAATTTTGTTTCATCGGTGTGGTCATTGATTTACCCTGA
CTAAGTGATTCATATTTGCACAGATGGACATCTTTATGCTAATCTACACCAAGGACTGAT
GGTAATTCCCACCAGGACCAGGACACATATACCAGTTACATAGAAAAATAATATACCGGT
TTAATGAATAGCATGTACTTTAACTCTACTAGGATGATATTTGCAGAAAGTAGTCATGTT
ATATGATAGACCAAAAAAAAAACTCCCAGCAATAGCTTCCAGCAGTAACGTCTCTAGAAC
TTTAGTCGCGCTTTTAGCCGCACACCGACAAATTGGAAACATTTGCCTCTTCTCCGCCGA
CCTAAATAACTTCTTCACCCTACTAGTAAGCCTCCCGAGTACCGACATACTAAATGTGCC
TTTGCCTAGAATACAATTGTTTGCAGCTTGCAAAACGACCTAAGCCGCAATAATCAATGG
AAACGACATAAACCGGCATCCCTTCTCCCATCGATTCATCCAAACAGAAACCCCCACCTT
GCGCACGCAACTAAGCGCAAGACGCCGCAGGCCTATCAAGTTCAATTTGCCCGAAGCACT
CTTCAGGAAACCATCGGTTCATCCCTGGTTTGTTCTCTAGCTGCTTCTCTACCAAGCCAG
TGGTGGAAGAGACAAATCAGCGGTGGGTACAATGAACACGCCCTCGAGTGACGACCTAAC
CCCAAGGGACCGAAAACGCTGCAAAAATCCATGGCAGCGGAGCCGCAAGAAACTAGTCCT
GACCAGAGATGCGCAAGAAATTCTGCAACCAACCAAGTAGCGGCGGCGGCACACAATGCC
CTCCCGAGGGATGTGGAAGGAATCCTTGATGGTGGTGGGCTAATGGAGGGAGCAAGAGGG
GAGGCTGGTGTGTTGTTTTCCACCTTGTCCTTGTCGAGCAGGGGCGATGCTAGGTGGGCG
TCGGGGCGCGCGGTCTTGACATATCCTGGGGGCGGGAACGGGAAGCAGCGAGACATGGCA
CGGCCGCCTGGGGCCCCGCCGGATCAGCCCGCCGCCACCAGAGCCCAGTCCTCCTCCTCC
TCCTCCTCCCTCGGGAATCCTTGTCCCGCTGCGGCGGGCGGGGTCAGTGGGCCGGGCGGG
GGGAGCATGGGGCCGTCATCCCGGCGGGCGGCGGGGATCTGGGGGCGGGCGCGGGGATCC
GCGGAGCCGAGCGGGGAAGCGGCGGGGGGCGGGGCGGCCTCACGGCAGCCGCCAGCGCCG
GCGGAGGCGGGGG