Contig Data
morexGenes
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Map Locations of contig_1593933 (3401 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1593933

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_21272 1 1776 bp MLOC_21272.1 Available Available None
MLOC_21273 1 592 bp AK364902 Available Available None





CDS Structure of MLOC_21272






CDS Structure of MLOC_21273






Contig Sequence (3401 bp)

>contig_1593933 3401 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGTCTGTGCTCAGAGGTTGTGGAGCATTTTCTATCTACGTTTCG
ACTGCCACAGTTAGGAAAAATCTGCCGTGGCAGGAAGAGCGTGGGGGTACAAAGTATCAT
TGCTAATTGGCAGGATATATGCTAACCAACCAAGGGGCCGAGAGTCATATATTTAACTGT
CATGATCACCTAATCAGTACATGGCTATGAAAGATTGATAATAACGGTGTCTGTTAAGAG
CTAGGCAACTGCACTTTAGCACAATGTAGTACTAGGCCTACACGGTCACATTTTCTGCCT
GGTTTTAACGAAGGTGTCTTTCTTCAGTTCTGTATGGAAGAGGTGCGTGTTCGTACCACG
ACAACTTCTGGGAGGATTTGTGGGTGTCTGATGTTATTGTCAGTCTTTTTTAAAAGCCAG
ATAGGTTGTTTGGCCTTACAAAAGATTTTGGTTAGTTAAGGTCTCTCTCAAAAGTTAAAA
AGACTTTTCTAGTTAGCATTTAGGAATATCATTTTAACTAAGGATAATTTGCTCAGAAGA
GGTTGGTGGCAGTGCAATTGAACATCCTTCTATCCTTTGTGTAGTAGCCCGCTATGTATG
GGAGGTGGCGGAATTCACTTTTGGTATTAAGATTATACCTGCATTGTTTAGTGAAGTACG
TGAATGGATTAATAGATGCTCTGTAAAGCATACACAGTTCATGGCGATAGCGGTTTTACA
TGTGGTTTGCTTTGCTCCATATGGAAAACCAGGGACAGCAGACTGTTAAAAATATGTTCT
TCTTCAGGACCCTGCTAATGTATGTTTCAGATTTCGCATTGGTTATCCTACCAGGCTGGC
TTACAAAAGCTAAAATTGCGAAGCTACCAAGCGCCACTGCTGTTGCAAGTGACATCTGAA
GTTTTCAGTCACCGCTAGGGATAAAGGCCTCTGGTGCATAGGAATGAAGATTGCTGATAA
CAAATATCAGAACAGGAAACTGTAGTTTTGTTGCCCGACTCTGTTTCCGTATCTGTCCTT
GTTATGGTCAGAGTGCTAGAGTGTGGCTTGGCAAAGCTACCATAAGTACCCTGGAGTCTG
GTATGTTGTAATGTAATGCTTCGTAGGATATTGGTAGGAAGCATGGATGCACAAGCATGC
CATGTATATGGATGAGAGAAATCTGGTGTATTATCAGTTTTATGAAATGGAATGGGAGCA
CTGAGCTACATTATAAAGTATGACCATTAGATGAATAAGTTCCCAGAATTTGATCTTTAA
CTTCAAATCAGTATTACATTAAAACAGGGAATGAATAGAACATATAGCATGGAAAGCATG
ATCAGGAACTCAATTTTATTGCACTACTACAGCATGGTTAGACGAAATAAATAACATGTG
CACCATGCCACCATCAAGTTACTAAGAGATTATAAATAACAATACTAACTATTTACAGAT
TATTATCCACAGTTTATCAAGGTAAAGACTGACAAACGCTATAGAAGCAAATTCATGCCA
TGAATAAAGTCCGCATGTCACAGTTTTAGCCAGAAAAACATCTTATATATGCAATGAGCA
CGGCATACTTTACTAATCAATTCGAACACTTCACATCAGATGTCCAGAACACAAACAATA
AGCTAAAGAATATTATGTGGTGATAAAAGTATACCCATGACAACATCAGCTGCTACTTTA
ACATCACAAGAACAAAATTGCAAAGATAGGGCAATTTATTTAAGGTCCACTTTGAGAATT
ACTACTCAAGCAGTTACTGTTTACTGTGGATGAAAAAGATTATAAGAGAGTAAAAACTTG
ATGATGTGTTTATTCATTCATTTGAACTAACTTCGTCCATGCATTAGTTAATTAAAGAAC
ATCTAAGATGAAAAGAATATCACTCTTAAGGTAATACAAAACAAAAAGATTTGTGTGCAC
GTACAAATGGTATGAACCTAAGGACACTAACCTTTTTCCACTTTGCAATCAGATTACGGT
CTGCATAACCCTGGTCCAGGCAGAACTCATAGAGCTCCTTTGATATTTCCTTCCTTCTAT
AGAAAAGATCATATATGTAACGACTCCTTTGATGAGAAATGCGGAAAATTGGCCAGAGTG
CTTCACACTTCCTCTTCCCGTCATGTGTATCGTTTTCAGCTGCACGCGCAGATCATATTA
GTACCCATCCTAGAGTATGAAGTAGCATTGCAGATCTGAAAAGGGTACACTGATAGATAC
ACATGCTTAATAATCTGCATACCTTCTCTCATTTTGGCATCCAGCTCACGGATTGTGGGT
TCAATAAGCGCCCATCCTTCAGGATATTCGACACGGCTTGTCTTTATCTTAGGCATGCTG
TCACAAGGGGTGTCCTAGGGCTGGCTTTGGAATGCACAAACCTGAGAAAACACAGATAAA
AGGGTAAGATTCAAATAGCATATACTTATGCCACGAAAATCATCCAGATATCAGTGCATT
TTTCCAAAATAAAAGCAGGAACTGACAACTGAATAAAGGTTCATTCTGACTCTAGCATTA
ACACCCAAGTATTTCAAGCTATACTAGTAAACAAAATAAACTCTCTCAAGAACAGGGGCG
GATCTAGAGATGGTGTGCACCGGCACAGTGCACACCCAAAATTTATCCACATCAGGTGGG
GTTAAACTAAATCGTGGATGATAGAATGTTCATACCTCAGAAACCGATGGCCGAAATCGC
GGACGGGGTTGGGACGGCAGGGCGACTCGCGTGAAAGGTAGAGGGCTGTGGGGCGGCGAC
GGCGACTCGCGTGAAAGGCGGAGGGGTGTGGGGCGGCGACGGGTAGGGAGCCGCGGAGGA
GAGGTTAGGGCACGGCGGTGGCACTGGAGCCGCGTTGGATCGGGCTAGGGTAGGGCGAGG
GGGCGGGATGTCGGGAGACTGAGAGCAGAAGACGGTGCCGCACGGTGGGTCGGGTTAGGC
AACTCGAGCGCGCTTCCGTTTTGTGATCGGGCCGATTCATTTTTAACGCAAACATGTGTC
CGGTTTAGATTTTGGCGGACAGCCAGCGGACGCGCTTGAGCCCTCCTCTCGTCCGCGTCG
GGGACGCGTGACAGGAGGCCACCTACCTCCCACCGCCCGTACTTACTGCGCACGCCCGGT
AGGCCACGACTGTCATCCACTCAGACGGACGGTCGCCGTCCTTCTTAAATGGGAAAGCCA
TGGACCGGCACAGCGTACGCGCCCACTCCACTGTTGGAAATATGCCATAGAGGCNNNNNN
NAATTAGTTATTATTATATTTCTTAATTCATGATAATCGTTTATTATNNNNNNNATAATT
GTATTGAATGAAGACTTGTATACATGAGTGGATACATAGACAAAACACTGTCCCTAACAA
GCCTCTAGTCGGCAAGCCACATAAACAAACAAACACAAACA